Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MIR1302-4-201ENST00000408701 150 ntBASIC1.07□□□□□ -2.24
LDLRP01130 RNY4P29-201ENST00000410801 97 ntBASIC1.07□□□□□ -2.24
LDLRP01130 snoU13.2-201ENST00000459201 104 ntBASIC1.07□□□□□ -2.24
LDLRP01130 AC087343.1-201ENST00000477341 475 ntBASIC1.07□□□□□ -2.24
LDLRP01130 AC026421.1-201ENST00000519101 163 ntBASIC1.07□□□□□ -2.24
LDLRP01130 AL662814.1-201ENST00000617364 121 ntBASIC1.07□□□□□ -2.24
LDLRP01130 MIR6740-201ENST00000618268 113 ntBASIC1.07□□□□□ -2.24
LDLRP01130 AC027335.2-201ENST00000624030 375 ntBASIC1.07□□□□□ -2.24
LDLRP01130 AC008163.1-202ENST00000636004 2889 ntBASIC1.07□□□□□ -2.24
LDLRP01130 Y_RNA.190-201ENST00000363964 101 ntBASIC1.06□□□□□ -2.24
LDLRP01130 SNORA80D-201ENST00000384488 135 ntBASIC1.06□□□□□ -2.24
LDLRP01130 Y_RNA.558-201ENST00000384685 113 ntBASIC1.06□□□□□ -2.24
LDLRP01130 RN7SL793P-201ENST00000583259 296 ntBASIC1.06□□□□□ -2.24
LDLRP01130 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
LDLRP01130 AC020891.4-201ENST00000605745 93 ntBASIC1.06□□□□□ -2.24
LDLRP01130 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.06□□□□□ -2.24
LDLRP01130 MIR6516-201ENST00000630554 81 ntBASIC1.06□□□□□ -2.24
LDLRP01130 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
LDLRP01130 MIR30D-201ENST00000362283 70 ntBASIC1.05□□□□□ -2.24
LDLRP01130 RNU6-654P-201ENST00000364373 107 ntBASIC1.05□□□□□ -2.24
LDLRP01130 SNORD45B-201ENST00000364617 72 ntBASIC1.05□□□□□ -2.24
LDLRP01130 MIR588-201ENST00000384900 83 ntBASIC1.05□□□□□ -2.24
LDLRP01130 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.05□□□□□ -2.24
LDLRP01130 Y_RNA.593-201ENST00000410292 98 ntBASIC1.05□□□□□ -2.24
LDLRP01130 AC002429.1-201ENST00000437672 148 ntBASIC1.05□□□□□ -2.24
LDLRP01130 Y_RNA.659-201ENST00000515994 113 ntBASIC1.05□□□□□ -2.24
LDLRP01130 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.05□□□□□ -2.24
LDLRP01130 RNA5SP404-201ENST00000517118 132 ntBASIC1.05□□□□□ -2.24
LDLRP01130 MIR5000-201ENST00000577717 103 ntBASIC1.05□□□□□ -2.24
LDLRP01130 SNORD38.1-201ENST00000363863 68 ntBASIC1.04□□□□□ -2.24
LDLRP01130 RNU6-949P-201ENST00000384040 107 ntBASIC1.04□□□□□ -2.24
LDLRP01130 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.04□□□□□ -2.24
LDLRP01130 RNA5SP95-201ENST00000410319 137 ntBASIC1.04□□□□□ -2.24
LDLRP01130 RNU7-21P-201ENST00000459430 62 ntBASIC1.04□□□□□ -2.24
LDLRP01130 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
LDLRP01130 RNU6-86P-201ENST00000606534 107 ntBASIC1.04□□□□□ -2.24
LDLRP01130 Y_RNA.17-201ENST00000362433 111 ntBASIC1.03□□□□□ -2.24
LDLRP01130 RNU6-580P-201ENST00000365159 107 ntBASIC1.03□□□□□ -2.24
LDLRP01130 RNU6-396P-201ENST00000365369 105 ntBASIC1.03□□□□□ -2.24
LDLRP01130 RNY1P4-201ENST00000384595 115 ntBASIC1.03□□□□□ -2.24
LDLRP01130 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
LDLRP01130 RNU6-205P-201ENST00000390858 107 ntBASIC1.03□□□□□ -2.24
LDLRP01130 SNORA26.2-201ENST00000390922 122 ntBASIC1.03□□□□□ -2.24
LDLRP01130 RNU6-592P-201ENST00000411333 103 ntBASIC1.03□□□□□ -2.24
LDLRP01130 RNU7-48P-201ENST00000458875 63 ntBASIC1.03□□□□□ -2.24
LDLRP01130 AC023827.1-201ENST00000569247 97 ntBASIC1.03□□□□□ -2.24
LDLRP01130 MIR4439-201ENST00000583746 80 ntBASIC1.03□□□□□ -2.24
LDLRP01130 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.03□□□□□ -2.24
LDLRP01130 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
LDLRP01130 Y_RNA.98-201ENST00000363109 102 ntBASIC1.02□□□□□ -2.25
LDLRP01130 Y_RNA.173-201ENST00000363776 113 ntBASIC1.02□□□□□ -2.25
LDLRP01130 SNORD58A-201ENST00000383875 65 ntBASIC1.02□□□□□ -2.25
LDLRP01130 RNU6-813P-201ENST00000384691 107 ntBASIC1.02□□□□□ -2.25
LDLRP01130 MT-TN-201ENST00000387400 73 ntBASIC1.02□□□□□ -2.25
LDLRP01130 U8.15-201ENST00000390947 134 ntBASIC1.02□□□□□ -2.25
LDLRP01130 MIR548G-201ENST00000408442 89 ntBASIC1.02□□□□□ -2.25
LDLRP01130 RNU6-447P-201ENST00000410293 104 ntBASIC1.02□□□□□ -2.25
LDLRP01130 RNU6-1118P-201ENST00000410382 104 ntBASIC1.02□□□□□ -2.25
LDLRP01130 RNU6-1076P-201ENST00000410397 104 ntBASIC1.02□□□□□ -2.25
LDLRP01130 RNU6-355P-201ENST00000410427 104 ntBASIC1.02□□□□□ -2.25
LDLRP01130 RNU6-791P-201ENST00000410467 104 ntBASIC1.02□□□□□ -2.25
LDLRP01130 RNU6-705P-201ENST00000410601 104 ntBASIC1.02□□□□□ -2.25
LDLRP01130 RNU6-887P-201ENST00000410660 100 ntBASIC1.02□□□□□ -2.25
LDLRP01130 RNU6-1100P-201ENST00000410691 104 ntBASIC1.02□□□□□ -2.25
LDLRP01130 RNU6-860P-201ENST00000410860 104 ntBASIC1.02□□□□□ -2.25
LDLRP01130 RNU6-1217P-201ENST00000411276 104 ntBASIC1.02□□□□□ -2.25
LDLRP01130 RNU6-785P-201ENST00000411324 104 ntBASIC1.02□□□□□ -2.25
LDLRP01130 RNU7-90P-201ENST00000459216 62 ntBASIC1.02□□□□□ -2.25
LDLRP01130 Y_RNA.705-201ENST00000516862 110 ntBASIC1.02□□□□□ -2.25
LDLRP01130 AC138749.4-201ENST00000563970 127 ntBASIC1.02□□□□□ -2.25
LDLRP01130 MIR4264-201ENST00000583520 66 ntBASIC1.02□□□□□ -2.25
LDLRP01130 AC096720.1-201ENST00000604441 183 ntBASIC1.02□□□□□ -2.25
LDLRP01130 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
LDLRP01130 AC103810.7-201ENST00000607821 91 ntBASIC1.02□□□□□ -2.25
LDLRP01130 U6.90-201ENST00000614007 104 ntBASIC1.02□□□□□ -2.25
LDLRP01130 U6.70-201ENST00000620287 104 ntBASIC1.02□□□□□ -2.25
LDLRP01130 RNU6-1244P-201ENST00000363614 108 ntBASIC1.01□□□□□ -2.25
LDLRP01130 RNU6-865P-201ENST00000364772 107 ntBASIC1.01□□□□□ -2.25
LDLRP01130 RNU6-573P-201ENST00000383938 106 ntBASIC1.01□□□□□ -2.25
LDLRP01130 RNU6-1152P-201ENST00000384576 107 ntBASIC1.01□□□□□ -2.25
LDLRP01130 MIR216A-201ENST00000385063 110 ntBASIC1.01□□□□□ -2.25
LDLRP01130 SNORD12-201ENST00000391002 90 ntBASIC1.01□□□□□ -2.25
LDLRP01130 RNU6-1165P-201ENST00000410119 107 ntBASIC1.01□□□□□ -2.25
LDLRP01130 RNU6-613P-201ENST00000410412 108 ntBASIC1.01□□□□□ -2.25
LDLRP01130 RNA5SP237-201ENST00000410414 113 ntBASIC1.01□□□□□ -2.25
LDLRP01130 RN7SKP12-201ENST00000516275 143 ntBASIC1.01□□□□□ -2.25
LDLRP01130 MIR2115-201ENST00000516657 100 ntBASIC1.01□□□□□ -2.25
LDLRP01130 RNU11-2P-201ENST00000516898 142 ntBASIC1.01□□□□□ -2.25
LDLRP01130 AP000753.3-201ENST00000604083 169 ntBASIC1.01□□□□□ -2.25
LDLRP01130 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
LDLRP01130 HSBP1P2-201ENST00000299671 229 ntBASIC1□□□□□ -2.25
LDLRP01130 MIR494-201ENST00000349529 81 ntBASIC1□□□□□ -2.25
LDLRP01130 MIR377-201ENST00000362145 69 ntBASIC1□□□□□ -2.25
LDLRP01130 MIR373-201ENST00000362273 69 ntBASIC1□□□□□ -2.25
LDLRP01130 Y_RNA.30-201ENST00000362572 97 ntBASIC1□□□□□ -2.25
LDLRP01130 Y_RNA.168-201ENST00000363740 102 ntBASIC1□□□□□ -2.25
LDLRP01130 RNY1P2-201ENST00000364820 117 ntBASIC1□□□□□ -2.25
LDLRP01130 RNA5SP173-201ENST00000364857 136 ntBASIC1□□□□□ -2.25
LDLRP01130 Y_RNA.567-201ENST00000384736 106 ntBASIC1□□□□□ -2.25
LDLRP01130 MIR450A2-201ENST00000385022 100 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms