Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AP001362.1-201ENST00000625165 124 ntBASIC-0.33□□□□□ -2.46
CPSF4O95639 MIR148A-201ENST00000362215 68 ntBASIC-0.34□□□□□ -2.46
CPSF4O95639 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.34□□□□□ -2.46
CPSF4O95639 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.34□□□□□ -2.46
CPSF4O95639 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.34□□□□□ -2.46
CPSF4O95639 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.34□□□□□ -2.46
CPSF4O95639 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.34□□□□□ -2.46
CPSF4O95639 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.34□□□□□ -2.46
CPSF4O95639 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.34□□□□□ -2.46
CPSF4O95639 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.34□□□□□ -2.46
CPSF4O95639 SNORD77B-201ENST00000391112 67 ntBASIC-0.34□□□□□ -2.46
CPSF4O95639 SNORD58.1-201ENST00000391313 66 ntBASIC-0.34□□□□□ -2.46
CPSF4O95639 SNORD63B-201ENST00000411005 70 ntBASIC-0.34□□□□□ -2.46
CPSF4O95639 AL117187.1-201ENST00000555482 181 ntBASIC-0.34□□□□□ -2.46
CPSF4O95639 AP001180.6-201ENST00000584918 159 ntBASIC-0.34□□□□□ -2.46
CPSF4O95639 RNU6-170P-201ENST00000362832 104 ntBASIC-0.35□□□□□ -2.47
CPSF4O95639 RNU6-508P-201ENST00000363231 103 ntBASIC-0.35□□□□□ -2.47
CPSF4O95639 SNORD49B-201ENST00000365172 72 ntBASIC-0.35□□□□□ -2.47
CPSF4O95639 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.35□□□□□ -2.47
CPSF4O95639 RNU6-918P-201ENST00000391219 106 ntBASIC-0.35□□□□□ -2.47
CPSF4O95639 SNORA75.5-201ENST00000391291 81 ntBASIC-0.35□□□□□ -2.47
CPSF4O95639 AC109327.2-201ENST00000448339 378 ntBASIC-0.35□□□□□ -2.47
CPSF4O95639 RNU7-2P-201ENST00000516096 62 ntBASIC-0.35□□□□□ -2.47
CPSF4O95639 MIR5589-201ENST00000579442 60 ntBASIC-0.35□□□□□ -2.47
CPSF4O95639 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.36□□□□□ -2.47
CPSF4O95639 RNU1-141P-201ENST00000364623 158 ntBASIC-0.36□□□□□ -2.47
CPSF4O95639 RNU6-524P-201ENST00000384270 107 ntBASIC-0.36□□□□□ -2.47
CPSF4O95639 RNU6-588P-201ENST00000410281 105 ntBASIC-0.36□□□□□ -2.47
CPSF4O95639 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.36□□□□□ -2.47
CPSF4O95639 RNU7-106P-201ENST00000459514 67 ntBASIC-0.36□□□□□ -2.47
CPSF4O95639 MTND5P40-201ENST00000559945 246 ntBASIC-0.36□□□□□ -2.47
CPSF4O95639 MIR3666-201ENST00000607845 111 ntBASIC-0.36□□□□□ -2.47
CPSF4O95639 MIR376B-201ENST00000614515 100 ntBASIC-0.36□□□□□ -2.47
CPSF4O95639 MIR548AZ-201ENST00000616567 95 ntBASIC-0.36□□□□□ -2.47
CPSF4O95639 MIR6844-201ENST00000637122 62 ntBASIC-0.36□□□□□ -2.47
CPSF4O95639 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.37□□□□□ -2.47
CPSF4O95639 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.37□□□□□ -2.47
CPSF4O95639 RNU6-616P-201ENST00000384353 107 ntBASIC-0.37□□□□□ -2.47
CPSF4O95639 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.37□□□□□ -2.47
CPSF4O95639 SNORA32.3-201ENST00000384772 121 ntBASIC-0.37□□□□□ -2.47
CPSF4O95639 MIR606-201ENST00000384851 96 ntBASIC-0.37□□□□□ -2.47
CPSF4O95639 RNA5SP300-201ENST00000391197 107 ntBASIC-0.37□□□□□ -2.47
CPSF4O95639 RNU7-74P-201ENST00000459104 62 ntBASIC-0.37□□□□□ -2.47
CPSF4O95639 AC107027.2-201ENST00000512197 115 ntBASIC-0.37□□□□□ -2.47
CPSF4O95639 AC008737.2-201ENST00000599446 118 ntBASIC-0.37□□□□□ -2.47
CPSF4O95639 RN7SL660P-201ENST00000614852 299 ntBASIC-0.37□□□□□ -2.47
CPSF4O95639 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.38□□□□□ -2.47
CPSF4O95639 RNU6-309P-201ENST00000364573 106 ntBASIC-0.38□□□□□ -2.47
CPSF4O95639 SNORD115-35-201ENST00000365122 82 ntBASIC-0.38□□□□□ -2.47
CPSF4O95639 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.38□□□□□ -2.47
CPSF4O95639 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.38□□□□□ -2.47
CPSF4O95639 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.38□□□□□ -2.47
CPSF4O95639 MIR1912-201ENST00000410389 80 ntBASIC-0.38□□□□□ -2.47
CPSF4O95639 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.38□□□□□ -2.47
CPSF4O95639 RNA5SP451-201ENST00000410588 110 ntBASIC-0.38□□□□□ -2.47
CPSF4O95639 MIR4473-201ENST00000583731 91 ntBASIC-0.38□□□□□ -2.47
CPSF4O95639 MIR101-1-201ENST00000362265 75 ntBASIC-0.39□□□□□ -2.47
CPSF4O95639 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.39□□□□□ -2.47
CPSF4O95639 RNY1P11-201ENST00000363759 113 ntBASIC-0.39□□□□□ -2.47
CPSF4O95639 U8.6-201ENST00000364939 135 ntBASIC-0.39□□□□□ -2.47
CPSF4O95639 SNORD18B-201ENST00000365659 72 ntBASIC-0.39□□□□□ -2.47
CPSF4O95639 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.39□□□□□ -2.47
CPSF4O95639 RNU6-571P-201ENST00000384128 107 ntBASIC-0.39□□□□□ -2.47
CPSF4O95639 AC244250.2-201ENST00000418731 148 ntBASIC-0.39□□□□□ -2.47
CPSF4O95639 RNU4-71P-201ENST00000516258 113 ntBASIC-0.39□□□□□ -2.47
CPSF4O95639 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.39□□□□□ -2.47
CPSF4O95639 RNY4P20-201ENST00000516678 93 ntBASIC-0.39□□□□□ -2.47
CPSF4O95639 MIR548AG2-201ENST00000581228 64 ntBASIC-0.39□□□□□ -2.47
CPSF4O95639 MIR4802-201ENST00000581881 80 ntBASIC-0.39□□□□□ -2.47
CPSF4O95639 MIR6507-201ENST00000613630 70 ntBASIC-0.39□□□□□ -2.47
CPSF4O95639 AL162726.3-218ENST00000636401 95 ntBASIC-0.39□□□□□ -2.47
CPSF4O95639 MIR655-201ENST00000362159 97 ntBASIC-0.4□□□□□ -2.47
CPSF4O95639 RNU6-312P-201ENST00000364629 107 ntBASIC-0.4□□□□□ -2.47
CPSF4O95639 RNU6-47P-201ENST00000383866 107 ntBASIC-0.4□□□□□ -2.47
CPSF4O95639 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.4□□□□□ -2.47
CPSF4O95639 MIR604-201ENST00000384880 94 ntBASIC-0.4□□□□□ -2.47
CPSF4O95639 MIR519E-201ENST00000385075 84 ntBASIC-0.4□□□□□ -2.47
CPSF4O95639 Z95118.1-201ENST00000421372 247 ntBASIC-0.4□□□□□ -2.47
CPSF4O95639 RNU6-850P-201ENST00000516934 103 ntBASIC-0.4□□□□□ -2.47
CPSF4O95639 MIR3646-201ENST00000578301 84 ntBASIC-0.4□□□□□ -2.47
CPSF4O95639 uc_338.36-201ENST00000622331 158 ntBASIC-0.4□□□□□ -2.47
CPSF4O95639 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.4□□□□□ -2.47
CPSF4O95639 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.4□□□□□ -2.47
CPSF4O95639 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 RNU6-811P-201ENST00000384069 107 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 MIR34C-201ENST00000384831 77 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 MIR516A2-201ENST00000384888 90 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 MIR181B2-201ENST00000385004 89 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 MIR617-201ENST00000385030 97 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 MIR516A1-201ENST00000385033 90 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 SNORD75.1-201ENST00000408373 60 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 AC093423.1-201ENST00000440817 142 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 RNU6-758P-201ENST00000516292 89 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms