Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 IGKV1-22-201ENST00000524313 326 ntBASIC0.01□□□□□ -2.41
SIX3O95343 AC104408.1-201ENST00000605241 170 ntBASIC0.01□□□□□ -2.41
SIX3O95343 SNORD115-2-201ENST00000362842 82 ntBASIC0□□□□□ -2.41
SIX3O95343 SNORD114-5-201ENST00000362928 70 ntBASIC0□□□□□ -2.41
SIX3O95343 SNORD114-10-201ENST00000363409 72 ntBASIC0□□□□□ -2.41
SIX3O95343 Y_RNA.133-201ENST00000363428 110 ntBASIC0□□□□□ -2.41
SIX3O95343 RNU6-1082P-201ENST00000364574 107 ntBASIC0□□□□□ -2.41
SIX3O95343 RNU6-702P-201ENST00000364982 107 ntBASIC0□□□□□ -2.41
SIX3O95343 SNORD115-20-201ENST00000365099 82 ntBASIC0□□□□□ -2.41
SIX3O95343 RNU7-164P-201ENST00000459221 62 ntBASIC0□□□□□ -2.41
SIX3O95343 MIR4752-201ENST00000579672 72 ntBASIC0□□□□□ -2.41
SIX3O95343 MIR548H5-201ENST00000580314 60 ntBASIC0□□□□□ -2.41
SIX3O95343 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.01□□□□□ -2.41
SIX3O95343 RNA5SP245-201ENST00000364239 121 ntBASIC-0.01□□□□□ -2.41
SIX3O95343 RNU6-312P-201ENST00000364629 107 ntBASIC-0.01□□□□□ -2.41
SIX3O95343 RNU6-918P-201ENST00000391219 106 ntBASIC-0.01□□□□□ -2.41
SIX3O95343 SNORD58.1-201ENST00000391313 66 ntBASIC-0.01□□□□□ -2.41
SIX3O95343 RNU6-782P-201ENST00000516852 104 ntBASIC-0.01□□□□□ -2.41
SIX3O95343 AC138749.4-201ENST00000563970 127 ntBASIC-0.01□□□□□ -2.41
SIX3O95343 AC138869.1-201ENST00000568623 124 ntBASIC-0.01□□□□□ -2.41
SIX3O95343 RNU7-10P-201ENST00000607194 63 ntBASIC-0.01□□□□□ -2.41
SIX3O95343 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.01□□□□□ -2.41
SIX3O95343 MIR8064-201ENST00000612863 90 ntBASIC-0.01□□□□□ -2.41
SIX3O95343 MIR6755-201ENST00000619993 66 ntBASIC-0.01□□□□□ -2.41
SIX3O95343 MIR499B-201ENST00000636498 73 ntBASIC-0.01□□□□□ -2.41
SIX3O95343 SNORD114-9-201ENST00000364370 72 ntBASIC-0.02□□□□□ -2.41
SIX3O95343 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.02□□□□□ -2.41
SIX3O95343 RNU6-196P-201ENST00000384315 107 ntBASIC-0.02□□□□□ -2.41
SIX3O95343 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.02□□□□□ -2.41
SIX3O95343 MIR593-201ENST00000384856 100 ntBASIC-0.02□□□□□ -2.41
SIX3O95343 MIR568-201ENST00000385036 95 ntBASIC-0.02□□□□□ -2.41
SIX3O95343 SNORD77B-201ENST00000391112 67 ntBASIC-0.02□□□□□ -2.41
SIX3O95343 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.02□□□□□ -2.41
SIX3O95343 SNORA42.1-201ENST00000363515 137 ntBASIC-0.03□□□□□ -2.41
SIX3O95343 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.03□□□□□ -2.41
SIX3O95343 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
SIX3O95343 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.03□□□□□ -2.41
SIX3O95343 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.03□□□□□ -2.41
SIX3O95343 RNA5SP236-201ENST00000516169 116 ntBASIC-0.03□□□□□ -2.41
SIX3O95343 RNU2-35P-201ENST00000516446 142 ntBASIC-0.03□□□□□ -2.41
SIX3O95343 MIR4320-201ENST00000636981 65 ntBASIC-0.03□□□□□ -2.41
SIX3O95343 RNA5SP128-201ENST00000365305 116 ntBASIC-0.04□□□□□ -2.42
SIX3O95343 RNU6-588P-201ENST00000410281 105 ntBASIC-0.04□□□□□ -2.42
SIX3O95343 RNU7-104P-201ENST00000459398 79 ntBASIC-0.04□□□□□ -2.42
SIX3O95343 RNU6-848P-201ENST00000515948 107 ntBASIC-0.04□□□□□ -2.42
SIX3O95343 RNU6-617P-201ENST00000516147 107 ntBASIC-0.04□□□□□ -2.42
SIX3O95343 RNU6-473P-201ENST00000516164 107 ntBASIC-0.04□□□□□ -2.42
SIX3O95343 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.04□□□□□ -2.42
SIX3O95343 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.05□□□□□ -2.42
SIX3O95343 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.05□□□□□ -2.42
SIX3O95343 RNU6-47P-201ENST00000383866 107 ntBASIC-0.05□□□□□ -2.42
SIX3O95343 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.05□□□□□ -2.42
SIX3O95343 RNU6-429P-201ENST00000384582 108 ntBASIC-0.05□□□□□ -2.42
SIX3O95343 RNU4-69P-201ENST00000410677 143 ntBASIC-0.05□□□□□ -2.42
SIX3O95343 RPL39P34-201ENST00000477141 156 ntBASIC-0.05□□□□□ -2.42
SIX3O95343 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.05□□□□□ -2.42
SIX3O95343 MIR4500-201ENST00000579472 76 ntBASIC-0.05□□□□□ -2.42
SIX3O95343 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.06□□□□□ -2.42
SIX3O95343 MT-TQ-201ENST00000387372 72 ntBASIC-0.06□□□□□ -2.42
SIX3O95343 RNU6-127P-201ENST00000390897 107 ntBASIC-0.06□□□□□ -2.42
SIX3O95343 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.06□□□□□ -2.42
SIX3O95343 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.06□□□□□ -2.42
SIX3O95343 AL359881.1-201ENST00000602916 267 ntBASIC-0.06□□□□□ -2.42
SIX3O95343 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.07□□□□□ -2.42
SIX3O95343 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.07□□□□□ -2.42
SIX3O95343 SNORA32.1-201ENST00000364514 115 ntBASIC-0.07□□□□□ -2.42
SIX3O95343 RNY1P2-201ENST00000364820 117 ntBASIC-0.07□□□□□ -2.42
SIX3O95343 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
SIX3O95343 MTND3P2-201ENST00000438452 342 ntBASIC-0.07□□□□□ -2.42
SIX3O95343 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.07□□□□□ -2.42
SIX3O95343 MIR378F-201ENST00000578143 78 ntBASIC-0.07□□□□□ -2.42
SIX3O95343 MIR3646-201ENST00000578301 84 ntBASIC-0.07□□□□□ -2.42
SIX3O95343 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.08□□□□□ -2.42
SIX3O95343 MIR587-201ENST00000384845 96 ntBASIC-0.08□□□□□ -2.42
SIX3O95343 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.08□□□□□ -2.42
SIX3O95343 MIR892B-201ENST00000401279 77 ntBASIC-0.08□□□□□ -2.42
SIX3O95343 RNU7-123P-201ENST00000515911 60 ntBASIC-0.08□□□□□ -2.42
SIX3O95343 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.09□□□□□ -2.42
SIX3O95343 RNU6-652P-201ENST00000365488 107 ntBASIC-0.09□□□□□ -2.42
SIX3O95343 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.09□□□□□ -2.42
SIX3O95343 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.09□□□□□ -2.42
SIX3O95343 RNU6-239P-201ENST00000390990 99 ntBASIC-0.09□□□□□ -2.42
SIX3O95343 AC244505.6-201ENST00000452829 130 ntBASIC-0.09□□□□□ -2.42
SIX3O95343 MIR4290-201ENST00000583807 95 ntBASIC-0.09□□□□□ -2.42
SIX3O95343 MIR3149-201ENST00000584629 83 ntBASIC-0.09□□□□□ -2.42
SIX3O95343 U7.6-201ENST00000610841 64 ntBASIC-0.09□□□□□ -2.42
SIX3O95343 RN7SL660P-201ENST00000614852 299 ntBASIC-0.09□□□□□ -2.42
SIX3O95343 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.1□□□□□ -2.43
SIX3O95343 MIR145-201ENST00000384967 88 ntBASIC-0.1□□□□□ -2.43
SIX3O95343 RNU7-48P-201ENST00000458875 63 ntBASIC-0.1□□□□□ -2.43
SIX3O95343 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.1□□□□□ -2.43
SIX3O95343 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.1□□□□□ -2.43
SIX3O95343 MIR4503-201ENST00000582187 83 ntBASIC-0.1□□□□□ -2.43
SIX3O95343 MIR365A-201ENST00000362260 87 ntBASIC-0.11□□□□□ -2.43
SIX3O95343 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.11□□□□□ -2.43
SIX3O95343 RNU6-726P-201ENST00000364680 107 ntBASIC-0.11□□□□□ -2.43
SIX3O95343 RNU6-865P-201ENST00000364772 107 ntBASIC-0.11□□□□□ -2.43
SIX3O95343 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.11□□□□□ -2.43
SIX3O95343 AC022559.1-201ENST00000520905 205 ntBASIC-0.11□□□□□ -2.43
SIX3O95343 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms