Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RNU7-90P-201ENST00000459216 62 ntBASIC1.57□□□□□ -2.16
VAMP4O75379 AC090897.1-201ENST00000580909 226 ntBASIC1.57□□□□□ -2.16
VAMP4O75379 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.57□□□□□ -2.16
VAMP4O75379 RNU6-53P-201ENST00000365367 106 ntBASIC1.56□□□□□ -2.16
VAMP4O75379 SNORD26-201ENST00000384147 75 ntBASIC1.56□□□□□ -2.16
VAMP4O75379 SNORD12-201ENST00000391002 90 ntBASIC1.56□□□□□ -2.16
VAMP4O75379 RNU6-321P-201ENST00000410912 106 ntBASIC1.56□□□□□ -2.16
VAMP4O75379 RNU7-185P-201ENST00000459215 60 ntBASIC1.56□□□□□ -2.16
VAMP4O75379 MIR4500-201ENST00000579472 76 ntBASIC1.56□□□□□ -2.16
VAMP4O75379 AL157834.3-201ENST00000615543 103 ntBASIC1.56□□□□□ -2.16
VAMP4O75379 RNU6-1125P-201ENST00000363601 107 ntBASIC1.55□□□□□ -2.16
VAMP4O75379 RNU6-480P-201ENST00000384332 107 ntBASIC1.55□□□□□ -2.16
VAMP4O75379 RNU6-955P-201ENST00000410497 104 ntBASIC1.55□□□□□ -2.16
VAMP4O75379 snoU13.21-201ENST00000459368 105 ntBASIC1.55□□□□□ -2.16
VAMP4O75379 RNU6-1194P-201ENST00000516208 104 ntBASIC1.55□□□□□ -2.16
VAMP4O75379 SNORA70.22-201ENST00000517160 124 ntBASIC1.55□□□□□ -2.16
VAMP4O75379 AC026421.1-201ENST00000519101 163 ntBASIC1.55□□□□□ -2.16
VAMP4O75379 AC023934.1-201ENST00000574529 2389 ntBASIC1.54□□□□□ -2.16
VAMP4O75379 Y_RNA.4-201ENST00000362333 112 ntBASIC1.54□□□□□ -2.16
VAMP4O75379 Y_RNA.164-201ENST00000363709 102 ntBASIC1.54□□□□□ -2.16
VAMP4O75379 SNORD116-10-201ENST00000363791 102 ntBASIC1.54□□□□□ -2.16
VAMP4O75379 RNU6-571P-201ENST00000384128 107 ntBASIC1.54□□□□□ -2.16
VAMP4O75379 MIR1302-4-201ENST00000408701 150 ntBASIC1.54□□□□□ -2.16
VAMP4O75379 SNRPGP12-201ENST00000449481 213 ntBASIC1.54□□□□□ -2.16
VAMP4O75379 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.54□□□□□ -2.16
VAMP4O75379 RNU6-162P-201ENST00000516228 103 ntBASIC1.54□□□□□ -2.16
VAMP4O75379 AC019288.1-201ENST00000557918 224 ntBASIC1.54□□□□□ -2.16
VAMP4O75379 AC103810.7-201ENST00000607821 91 ntBASIC1.54□□□□□ -2.16
VAMP4O75379 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.54□□□□□ -2.16
VAMP4O75379 RNU4-58P-201ENST00000363192 141 ntBASIC1.53□□□□□ -2.16
VAMP4O75379 Y_RNA.327-201ENST00000365201 102 ntBASIC1.53□□□□□ -2.16
VAMP4O75379 RNU6-939P-201ENST00000384634 107 ntBASIC1.53□□□□□ -2.16
VAMP4O75379 MIR1257-201ENST00000408490 117 ntBASIC1.53□□□□□ -2.16
VAMP4O75379 SNORD83.1-201ENST00000411362 77 ntBASIC1.53□□□□□ -2.16
VAMP4O75379 RPS26P5-201ENST00000418544 335 ntBASIC1.53□□□□□ -2.16
VAMP4O75379 SNORD73B-201ENST00000364394 72 ntBASIC1.52□□□□□ -2.17
VAMP4O75379 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.52□□□□□ -2.17
VAMP4O75379 TRMT112P2-201ENST00000512910 132 ntBASIC1.52□□□□□ -2.17
VAMP4O75379 Y_RNA.190-201ENST00000363964 101 ntBASIC1.51□□□□□ -2.17
VAMP4O75379 RNU6-392P-201ENST00000364926 101 ntBASIC1.51□□□□□ -2.17
VAMP4O75379 MIR125B2-201ENST00000385128 89 ntBASIC1.51□□□□□ -2.17
VAMP4O75379 RNU4-83P-201ENST00000410863 133 ntBASIC1.51□□□□□ -2.17
VAMP4O75379 SNORA72.7-201ENST00000516349 94 ntBASIC1.51□□□□□ -2.17
VAMP4O75379 RNU6-531P-201ENST00000516694 104 ntBASIC1.51□□□□□ -2.17
VAMP4O75379 SNORA25.16-201ENST00000516741 121 ntBASIC1.51□□□□□ -2.17
VAMP4O75379 AC023827.1-201ENST00000569247 97 ntBASIC1.51□□□□□ -2.17
VAMP4O75379 MIR4781-201ENST00000585250 76 ntBASIC1.51□□□□□ -2.17
VAMP4O75379 RNU6-403P-201ENST00000363163 104 ntBASIC1.5□□□□□ -2.17
VAMP4O75379 MIR181B2-201ENST00000385004 89 ntBASIC1.5□□□□□ -2.17
VAMP4O75379 RNU6-850P-201ENST00000516934 103 ntBASIC1.5□□□□□ -2.17
VAMP4O75379 AC020891.4-201ENST00000605745 93 ntBASIC1.5□□□□□ -2.17
VAMP4O75379 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
VAMP4O75379 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
VAMP4O75379 MIR1287-201ENST00000408492 90 ntBASIC1.49□□□□□ -2.17
VAMP4O75379 RNU6-765P-201ENST00000516916 99 ntBASIC1.49□□□□□ -2.17
VAMP4O75379 MIR4771-2-201ENST00000577758 74 ntBASIC1.49□□□□□ -2.17
VAMP4O75379 MIR4771-1-201ENST00000582617 74 ntBASIC1.49□□□□□ -2.17
VAMP4O75379 MIR6082-201ENST00000613604 109 ntBASIC1.49□□□□□ -2.17
VAMP4O75379 MIR8066-201ENST00000617280 78 ntBASIC1.49□□□□□ -2.17
VAMP4O75379 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
VAMP4O75379 BX276092.1-201ENST00000427368 251 ntBASIC1.48□□□□□ -2.17
VAMP4O75379 AC002429.1-201ENST00000437672 148 ntBASIC1.48□□□□□ -2.17
VAMP4O75379 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
VAMP4O75379 Y_RNA.226-201ENST00000364337 114 ntBASIC1.47□□□□□ -2.17
VAMP4O75379 SNORA25.9-201ENST00000365087 128 ntBASIC1.47□□□□□ -2.17
VAMP4O75379 SNORA25-201ENST00000384384 134 ntBASIC1.47□□□□□ -2.17
VAMP4O75379 MIR450A2-201ENST00000385022 100 ntBASIC1.47□□□□□ -2.17
VAMP4O75379 RNU7-40P-201ENST00000516397 64 ntBASIC1.47□□□□□ -2.17
VAMP4O75379 AL513043.2-201ENST00000573941 143 ntBASIC1.47□□□□□ -2.17
VAMP4O75379 MIR4676-201ENST00000583078 72 ntBASIC1.47□□□□□ -2.17
VAMP4O75379 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VAMP4O75379 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
VAMP4O75379 RNU6-369P-201ENST00000362515 102 ntBASIC1.46□□□□□ -2.18
VAMP4O75379 RNU6-1134P-201ENST00000365156 101 ntBASIC1.46□□□□□ -2.18
VAMP4O75379 SNORD116-22-201ENST00000384430 92 ntBASIC1.46□□□□□ -2.18
VAMP4O75379 RNU7-156P-201ENST00000517214 74 ntBASIC1.46□□□□□ -2.18
VAMP4O75379 SNORD92-201ENST00000585078 85 ntBASIC1.46□□□□□ -2.18
VAMP4O75379 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
VAMP4O75379 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VAMP4O75379 Y_RNA.13-201ENST00000362403 112 ntBASIC1.45□□□□□ -2.18
VAMP4O75379 Y_RNA.17-201ENST00000362433 111 ntBASIC1.45□□□□□ -2.18
VAMP4O75379 RNA5SP327-201ENST00000362494 101 ntBASIC1.45□□□□□ -2.18
VAMP4O75379 Y_RNA.42-201ENST00000362660 108 ntBASIC1.45□□□□□ -2.18
VAMP4O75379 Y_RNA.57-201ENST00000362806 113 ntBASIC1.45□□□□□ -2.18
VAMP4O75379 RNU6-820P-201ENST00000384273 107 ntBASIC1.45□□□□□ -2.18
VAMP4O75379 SNORA72.6-201ENST00000384520 129 ntBASIC1.45□□□□□ -2.18
VAMP4O75379 MIR499A-201ENST00000384903 122 ntBASIC1.45□□□□□ -2.18
VAMP4O75379 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
VAMP4O75379 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.45□□□□□ -2.18
VAMP4O75379 AC013244.2-201ENST00000603396 103 ntBASIC1.45□□□□□ -2.18
VAMP4O75379 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.45□□□□□ -2.18
VAMP4O75379 Y_RNA.56-201ENST00000362798 112 ntBASIC1.44□□□□□ -2.18
VAMP4O75379 MIR938-201ENST00000401216 83 ntBASIC1.44□□□□□ -2.18
VAMP4O75379 RNU6-994P-201ENST00000410507 111 ntBASIC1.44□□□□□ -2.18
VAMP4O75379 RNU6-762P-201ENST00000517107 102 ntBASIC1.44□□□□□ -2.18
VAMP4O75379 RNU7-10P-201ENST00000607194 63 ntBASIC1.44□□□□□ -2.18
VAMP4O75379 AC025521.1-201ENST00000621624 286 ntBASIC1.44□□□□□ -2.18
VAMP4O75379 AC027335.2-201ENST00000624030 375 ntBASIC1.44□□□□□ -2.18
VAMP4O75379 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
VAMP4O75379 MIR1-1-201ENST00000362147 71 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms