Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 uc_338.6-201ENST00000613544 171 ntBASIC1.77□□□□□ -2.13
TRIM13O60858 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.77□□□□□ -2.13
TRIM13O60858 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRIM13O60858 RNA5SP259-201ENST00000365541 109 ntBASIC1.76□□□□□ -2.13
TRIM13O60858 Y_RNA.500-201ENST00000384466 111 ntBASIC1.76□□□□□ -2.13
TRIM13O60858 RNU6-205P-201ENST00000390858 107 ntBASIC1.76□□□□□ -2.13
TRIM13O60858 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.76□□□□□ -2.13
TRIM13O60858 RNU6-531P-201ENST00000516694 104 ntBASIC1.76□□□□□ -2.13
TRIM13O60858 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.76□□□□□ -2.13
TRIM13O60858 Y_RNA.36-201ENST00000362602 112 ntBASIC1.75□□□□□ -2.13
TRIM13O60858 RNU4-58P-201ENST00000363192 141 ntBASIC1.75□□□□□ -2.13
TRIM13O60858 U8.13-201ENST00000390842 128 ntBASIC1.75□□□□□ -2.13
TRIM13O60858 Y_RNA.588-201ENST00000391254 102 ntBASIC1.75□□□□□ -2.13
TRIM13O60858 MIR942-201ENST00000401111 86 ntBASIC1.75□□□□□ -2.13
TRIM13O60858 snoU13.17-201ENST00000458802 104 ntBASIC1.75□□□□□ -2.13
TRIM13O60858 MIR2115-201ENST00000516657 100 ntBASIC1.75□□□□□ -2.13
TRIM13O60858 SNORA25.16-201ENST00000516741 121 ntBASIC1.75□□□□□ -2.13
TRIM13O60858 RNU6-922P-201ENST00000516753 99 ntBASIC1.75□□□□□ -2.13
TRIM13O60858 MIR3122-201ENST00000577243 73 ntBASIC1.75□□□□□ -2.13
TRIM13O60858 SNORA77B-201ENST00000578179 125 ntBASIC1.75□□□□□ -2.13
TRIM13O60858 MIR4491-201ENST00000581087 68 ntBASIC1.75□□□□□ -2.13
TRIM13O60858 AC103810.8-201ENST00000607347 118 ntBASIC1.75□□□□□ -2.13
TRIM13O60858 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TRIM13O60858 MIR377-201ENST00000362145 69 ntBASIC1.74□□□□□ -2.13
TRIM13O60858 SNORA25.3-201ENST00000363205 127 ntBASIC1.74□□□□□ -2.13
TRIM13O60858 SNORD115-31-201ENST00000365318 82 ntBASIC1.74□□□□□ -2.13
TRIM13O60858 RNU6-53P-201ENST00000365367 106 ntBASIC1.74□□□□□ -2.13
TRIM13O60858 RNU6-471P-201ENST00000383944 106 ntBASIC1.74□□□□□ -2.13
TRIM13O60858 MIR154-201ENST00000385243 84 ntBASIC1.74□□□□□ -2.13
TRIM13O60858 SNORA3.2-201ENST00000408221 125 ntBASIC1.74□□□□□ -2.13
TRIM13O60858 snoU13.25-201ENST00000458945 104 ntBASIC1.74□□□□□ -2.13
TRIM13O60858 RPL30P7-201ENST00000479312 323 ntBASIC1.74□□□□□ -2.13
TRIM13O60858 AC015688.6-201ENST00000577737 104 ntBASIC1.74□□□□□ -2.13
TRIM13O60858 Y_RNA.42-201ENST00000362660 108 ntBASIC1.73□□□□□ -2.13
TRIM13O60858 RNU6-1051P-201ENST00000365471 102 ntBASIC1.73□□□□□ -2.13
TRIM13O60858 RNU6-154P-201ENST00000384306 106 ntBASIC1.73□□□□□ -2.13
TRIM13O60858 MIR30A-201ENST00000385092 71 ntBASIC1.73□□□□□ -2.13
TRIM13O60858 MIR519A1-201ENST00000385257 85 ntBASIC1.73□□□□□ -2.13
TRIM13O60858 RNU6-663P-201ENST00000391105 106 ntBASIC1.73□□□□□ -2.13
TRIM13O60858 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.73□□□□□ -2.13
TRIM13O60858 RNU6-250P-201ENST00000516958 103 ntBASIC1.73□□□□□ -2.13
TRIM13O60858 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.73□□□□□ -2.13
TRIM13O60858 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.73□□□□□ -2.13
TRIM13O60858 RNU6-330P-201ENST00000363015 107 ntBASIC1.72□□□□□ -2.13
TRIM13O60858 SNORA8.1-201ENST00000384250 140 ntBASIC1.72□□□□□ -2.13
TRIM13O60858 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.72□□□□□ -2.13
TRIM13O60858 SNORD100-201ENST00000408573 76 ntBASIC1.72□□□□□ -2.13
TRIM13O60858 snoU13.9-201ENST00000458927 103 ntBASIC1.72□□□□□ -2.13
TRIM13O60858 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.72□□□□□ -2.13
TRIM13O60858 RNU11-2P-201ENST00000516898 142 ntBASIC1.72□□□□□ -2.13
TRIM13O60858 RNU7-156P-201ENST00000517214 74 ntBASIC1.72□□□□□ -2.13
TRIM13O60858 AP003716.2-201ENST00000528260 108 ntBASIC1.72□□□□□ -2.13
TRIM13O60858 MIR4435-1-201ENST00000582552 80 ntBASIC1.72□□□□□ -2.13
TRIM13O60858 Y_RNA.207-201ENST00000364142 106 ntBASIC1.71□□□□□ -2.14
TRIM13O60858 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
TRIM13O60858 RNA5SP508-201ENST00000411327 119 ntBASIC1.71□□□□□ -2.14
TRIM13O60858 AC003989.2-201ENST00000440224 169 ntBASIC1.71□□□□□ -2.14
TRIM13O60858 RNU7-195P-201ENST00000458793 62 ntBASIC1.71□□□□□ -2.14
TRIM13O60858 TRAJ51-201ENST00000504127 63 ntBASIC1.71□□□□□ -2.14
TRIM13O60858 MIR6516-201ENST00000630554 81 ntBASIC1.71□□□□□ -2.14
TRIM13O60858 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.71□□□□□ -2.14
TRIM13O60858 RNU6-340P-201ENST00000364005 107 ntBASIC1.7□□□□□ -2.14
TRIM13O60858 RNU1-36P-201ENST00000365130 165 ntBASIC1.7□□□□□ -2.14
TRIM13O60858 Y_RNA.536-201ENST00000384621 113 ntBASIC1.7□□□□□ -2.14
TRIM13O60858 RNU6-291P-201ENST00000384720 107 ntBASIC1.7□□□□□ -2.14
TRIM13O60858 MIR9-3-201ENST00000385084 90 ntBASIC1.7□□□□□ -2.14
TRIM13O60858 SNORD93-201ENST00000408813 74 ntBASIC1.7□□□□□ -2.14
TRIM13O60858 AL606490.4-201ENST00000423117 127 ntBASIC1.7□□□□□ -2.14
TRIM13O60858 HMGN2P23-201ENST00000456759 269 ntBASIC1.7□□□□□ -2.14
TRIM13O60858 MIR3198-2-201ENST00000577868 80 ntBASIC1.7□□□□□ -2.14
TRIM13O60858 GHRLOS.1-201ENST00000610995 70 ntBASIC1.7□□□□□ -2.14
TRIM13O60858 TRDV1-202ENST00000621643 102 ntBASIC1.7□□□□□ -2.14
TRIM13O60858 RNU6-580P-201ENST00000365159 107 ntBASIC1.69□□□□□ -2.14
TRIM13O60858 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.69□□□□□ -2.14
TRIM13O60858 MIR1185-1-201ENST00000408598 86 ntBASIC1.69□□□□□ -2.14
TRIM13O60858 RPS27P16-201ENST00000425758 201 ntBASIC1.69□□□□□ -2.14
TRIM13O60858 MIR18B-201ENST00000454574 71 ntBASIC1.69□□□□□ -2.14
TRIM13O60858 RNA5SP182-201ENST00000516064 82 ntBASIC1.69□□□□□ -2.14
TRIM13O60858 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.69□□□□□ -2.14
TRIM13O60858 AC005520.4-201ENST00000604337 90 ntBASIC1.69□□□□□ -2.14
TRIM13O60858 MIR8063-201ENST00000621930 81 ntBASIC1.69□□□□□ -2.14
TRIM13O60858 SNORD33-201ENST00000362761 85 ntBASIC1.68□□□□□ -2.14
TRIM13O60858 RNU6-1260P-201ENST00000362944 107 ntBASIC1.68□□□□□ -2.14
TRIM13O60858 Y_RNA.239-201ENST00000364444 113 ntBASIC1.68□□□□□ -2.14
TRIM13O60858 MIR548H5-201ENST00000580314 60 ntBASIC1.68□□□□□ -2.14
TRIM13O60858 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.68□□□□□ -2.14
TRIM13O60858 RNU7-10P-201ENST00000607194 63 ntBASIC1.68□□□□□ -2.14
TRIM13O60858 MIR101-2-201ENST00000362195 79 ntBASIC1.67□□□□□ -2.14
TRIM13O60858 RNU6-403P-201ENST00000363163 104 ntBASIC1.67□□□□□ -2.14
TRIM13O60858 RNU6-654P-201ENST00000364373 107 ntBASIC1.67□□□□□ -2.14
TRIM13O60858 RNY4P3-201ENST00000365254 95 ntBASIC1.67□□□□□ -2.14
TRIM13O60858 Y_RNA.371-201ENST00000365591 113 ntBASIC1.67□□□□□ -2.14
TRIM13O60858 RNA5SP95-201ENST00000410319 137 ntBASIC1.67□□□□□ -2.14
TRIM13O60858 Y_RNA.606-201ENST00000410579 103 ntBASIC1.67□□□□□ -2.14
TRIM13O60858 Y_RNA.809-201ENST00000516058 95 ntBASIC1.67□□□□□ -2.14
TRIM13O60858 MIR4696-201ENST00000581431 70 ntBASIC1.67□□□□□ -2.14
TRIM13O60858 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.67□□□□□ -2.14
TRIM13O60858 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
TRIM13O60858 RNU6-664P-201ENST00000362381 107 ntBASIC1.66□□□□□ -2.14
TRIM13O60858 MIR2113-201ENST00000459007 91 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 218 ms