Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 Y_RNA.85-201ENST00000363014 111 ntBASIC0.69□□□□□ -2.3
ZIC3O60481 Y_RNA.536-201ENST00000384621 113 ntBASIC0.69□□□□□ -2.3
ZIC3O60481 Y_RNA.549-201ENST00000384657 102 ntBASIC0.69□□□□□ -2.3
ZIC3O60481 MIR34C-201ENST00000384831 77 ntBASIC0.69□□□□□ -2.3
ZIC3O60481 MIR548A1-201ENST00000385041 97 ntBASIC0.69□□□□□ -2.3
ZIC3O60481 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.69□□□□□ -2.3
ZIC3O60481 AL162726.3-218ENST00000636401 95 ntBASIC0.69□□□□□ -2.3
ZIC3O60481 MIR18A-201ENST00000362310 71 ntBASIC0.68□□□□□ -2.3
ZIC3O60481 RNU6-110P-201ENST00000384508 104 ntBASIC0.68□□□□□ -2.3
ZIC3O60481 RNU6-291P-201ENST00000384720 107 ntBASIC0.68□□□□□ -2.3
ZIC3O60481 RNU6-816P-201ENST00000390914 107 ntBASIC0.68□□□□□ -2.3
ZIC3O60481 RNU6-1154P-201ENST00000391001 104 ntBASIC0.68□□□□□ -2.3
ZIC3O60481 RNU6-679P-201ENST00000391003 106 ntBASIC0.68□□□□□ -2.3
ZIC3O60481 RNU6-1268P-201ENST00000391214 107 ntBASIC0.68□□□□□ -2.3
ZIC3O60481 RNU6-1239P-201ENST00000391310 107 ntBASIC0.68□□□□□ -2.3
ZIC3O60481 SNORA7.5-201ENST00000410672 110 ntBASIC0.68□□□□□ -2.3
ZIC3O60481 Y_RNA.697-201ENST00000516776 113 ntBASIC0.68□□□□□ -2.3
ZIC3O60481 MIR4653-201ENST00000585107 83 ntBASIC0.68□□□□□ -2.3
ZIC3O60481 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.68□□□□□ -2.3
ZIC3O60481 Y_RNA.360-201ENST00000365512 102 ntBASIC0.67□□□□□ -2.3
ZIC3O60481 Y_RNA.507-201ENST00000384500 99 ntBASIC0.67□□□□□ -2.3
ZIC3O60481 MIR598-201ENST00000384868 97 ntBASIC0.67□□□□□ -2.3
ZIC3O60481 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
ZIC3O60481 RNA5SP222-201ENST00000411039 105 ntBASIC0.67□□□□□ -2.3
ZIC3O60481 RNU6-313P-201ENST00000516317 112 ntBASIC0.67□□□□□ -2.3
ZIC3O60481 MIR4500-201ENST00000579472 76 ntBASIC0.67□□□□□ -2.3
ZIC3O60481 uc_338.16-201ENST00000621804 95 ntBASIC0.67□□□□□ -2.3
ZIC3O60481 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
ZIC3O60481 Y_RNA.32-201ENST00000362589 110 ntBASIC0.66□□□□□ -2.3
ZIC3O60481 RNU6-1313P-201ENST00000362622 102 ntBASIC0.66□□□□□ -2.3
ZIC3O60481 RNA5SP117-201ENST00000365294 118 ntBASIC0.66□□□□□ -2.3
ZIC3O60481 RNU4-45P-201ENST00000365469 141 ntBASIC0.66□□□□□ -2.3
ZIC3O60481 RNU6-409P-201ENST00000384114 104 ntBASIC0.66□□□□□ -2.3
ZIC3O60481 RNU6-535P-201ENST00000384722 107 ntBASIC0.66□□□□□ -2.3
ZIC3O60481 MIR1912-201ENST00000410389 80 ntBASIC0.66□□□□□ -2.3
ZIC3O60481 RNU2-51P-201ENST00000410708 197 ntBASIC0.66□□□□□ -2.3
ZIC3O60481 RNU6-1018P-201ENST00000516577 106 ntBASIC0.66□□□□□ -2.3
ZIC3O60481 SNORA31.14-201ENST00000516728 116 ntBASIC0.66□□□□□ -2.3
ZIC3O60481 RNU6-1006P-201ENST00000516998 103 ntBASIC0.66□□□□□ -2.3
ZIC3O60481 MIR5000-201ENST00000577717 103 ntBASIC0.66□□□□□ -2.3
ZIC3O60481 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
ZIC3O60481 HSBP1P2-201ENST00000299671 229 ntBASIC0.65□□□□□ -2.31
ZIC3O60481 Y_RNA.56-201ENST00000362798 112 ntBASIC0.65□□□□□ -2.31
ZIC3O60481 SNORA63.5-201ENST00000363548 123 ntBASIC0.65□□□□□ -2.31
ZIC3O60481 Y_RNA.155-201ENST00000363632 101 ntBASIC0.65□□□□□ -2.31
ZIC3O60481 Y_RNA.309-201ENST00000365046 111 ntBASIC0.65□□□□□ -2.31
ZIC3O60481 RNU6-1144P-201ENST00000384247 104 ntBASIC0.65□□□□□ -2.31
ZIC3O60481 SNORD116-21-201ENST00000384507 92 ntBASIC0.65□□□□□ -2.31
ZIC3O60481 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.65□□□□□ -2.31
ZIC3O60481 RNA5SP480-201ENST00000516840 109 ntBASIC0.65□□□□□ -2.31
ZIC3O60481 MIR101-2-201ENST00000362195 79 ntBASIC0.64□□□□□ -2.31
ZIC3O60481 Y_RNA.174-201ENST00000363781 105 ntBASIC0.64□□□□□ -2.31
ZIC3O60481 Y_RNA.281-201ENST00000364774 94 ntBASIC0.64□□□□□ -2.31
ZIC3O60481 RNY1P8-201ENST00000383970 114 ntBASIC0.64□□□□□ -2.31
ZIC3O60481 RNU6-880P-201ENST00000384526 107 ntBASIC0.64□□□□□ -2.31
ZIC3O60481 RNU6-476P-201ENST00000384726 107 ntBASIC0.64□□□□□ -2.31
ZIC3O60481 SNORA19-201ENST00000384737 128 ntBASIC0.64□□□□□ -2.31
ZIC3O60481 MIR146A-201ENST00000385201 99 ntBASIC0.64□□□□□ -2.31
ZIC3O60481 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.64□□□□□ -2.31
ZIC3O60481 RNU6-733P-201ENST00000410759 104 ntBASIC0.64□□□□□ -2.31
ZIC3O60481 RNA5SP436-201ENST00000516020 115 ntBASIC0.64□□□□□ -2.31
ZIC3O60481 AC068339.1-201ENST00000526965 141 ntBASIC0.64□□□□□ -2.31
ZIC3O60481 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.64□□□□□ -2.31
ZIC3O60481 PVT1_3.1-201ENST00000620853 95 ntBASIC0.64□□□□□ -2.31
ZIC3O60481 AL512310.12-203ENST00000640543 90 ntBASIC0.64□□□□□ -2.31
ZIC3O60481 RNU6-834P-201ENST00000362367 110 ntBASIC0.63□□□□□ -2.31
ZIC3O60481 Y_RNA.35-201ENST00000362601 101 ntBASIC0.63□□□□□ -2.31
ZIC3O60481 RNA5SP245-201ENST00000364239 121 ntBASIC0.63□□□□□ -2.31
ZIC3O60481 MIR7-2-201ENST00000384970 110 ntBASIC0.63□□□□□ -2.31
ZIC3O60481 RNU6-1064P-201ENST00000410626 104 ntBASIC0.63□□□□□ -2.31
ZIC3O60481 MIR3678-201ENST00000578455 94 ntBASIC0.63□□□□□ -2.31
ZIC3O60481 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.63□□□□□ -2.31
ZIC3O60481 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.63□□□□□ -2.31
ZIC3O60481 SNORA36.2-201ENST00000384004 127 ntBASIC0.62□□□□□ -2.31
ZIC3O60481 RNU6-1201P-201ENST00000384227 107 ntBASIC0.62□□□□□ -2.31
ZIC3O60481 MIR644A-201ENST00000385262 94 ntBASIC0.62□□□□□ -2.31
ZIC3O60481 MIR548I2-201ENST00000408348 149 ntBASIC0.62□□□□□ -2.31
ZIC3O60481 AL606490.4-201ENST00000423117 127 ntBASIC0.62□□□□□ -2.31
ZIC3O60481 BX276092.1-201ENST00000427368 251 ntBASIC0.62□□□□□ -2.31
ZIC3O60481 SNRPGP12-201ENST00000449481 213 ntBASIC0.62□□□□□ -2.31
ZIC3O60481 MIR548H5-201ENST00000580314 60 ntBASIC0.62□□□□□ -2.31
ZIC3O60481 Y_RNA.36-201ENST00000362602 112 ntBASIC0.61□□□□□ -2.31
ZIC3O60481 Y_RNA.247-201ENST00000364500 92 ntBASIC0.61□□□□□ -2.31
ZIC3O60481 U8.6-201ENST00000364939 135 ntBASIC0.61□□□□□ -2.31
ZIC3O60481 SNORD38.2-201ENST00000384470 69 ntBASIC0.61□□□□□ -2.31
ZIC3O60481 MIR508-201ENST00000384857 115 ntBASIC0.61□□□□□ -2.31
ZIC3O60481 MIR140-201ENST00000385282 100 ntBASIC0.61□□□□□ -2.31
ZIC3O60481 AC092628.1-201ENST00000436250 252 ntBASIC0.61□□□□□ -2.31
ZIC3O60481 AC138907.6-201ENST00000568401 126 ntBASIC0.61□□□□□ -2.31
ZIC3O60481 MIR5009-201ENST00000578736 100 ntBASIC0.61□□□□□ -2.31
ZIC3O60481 MIR4714-201ENST00000580728 77 ntBASIC0.61□□□□□ -2.31
ZIC3O60481 AL590095.2-201ENST00000604136 117 ntBASIC0.61□□□□□ -2.31
ZIC3O60481 Y_RNA.49-201ENST00000362714 112 ntBASIC0.6□□□□□ -2.31
ZIC3O60481 SNORD38.1-201ENST00000363863 68 ntBASIC0.6□□□□□ -2.31
ZIC3O60481 Y_RNA.323-201ENST00000365157 109 ntBASIC0.6□□□□□ -2.31
ZIC3O60481 Y_RNA.377-201ENST00000365644 108 ntBASIC0.6□□□□□ -2.31
ZIC3O60481 RNU6-1056P-201ENST00000383996 107 ntBASIC0.6□□□□□ -2.31
ZIC3O60481 RNU6-571P-201ENST00000384128 107 ntBASIC0.6□□□□□ -2.31
ZIC3O60481 RNU7-10P-201ENST00000607194 63 ntBASIC0.6□□□□□ -2.31
ZIC3O60481 AL442128.1-201ENST00000615151 90 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms