Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
LDB2O43679 RNU6-679P-201ENST00000391003 106 ntBASIC0.86□□□□□ -2.27
LDB2O43679 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.86□□□□□ -2.27
LDB2O43679 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.86□□□□□ -2.27
LDB2O43679 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.86□□□□□ -2.27
LDB2O43679 RNU6-1194P-201ENST00000516208 104 ntBASIC0.86□□□□□ -2.27
LDB2O43679 RNU6-1018P-201ENST00000516577 106 ntBASIC0.86□□□□□ -2.27
LDB2O43679 MIR376B-201ENST00000614515 100 ntBASIC0.86□□□□□ -2.27
LDB2O43679 AC022709.1-201ENST00000615967 87 ntBASIC0.86□□□□□ -2.27
LDB2O43679 MIR6515-201ENST00000619843 57 ntBASIC0.86□□□□□ -2.27
LDB2O43679 RNU4-58P-201ENST00000363192 141 ntBASIC0.85□□□□□ -2.27
LDB2O43679 Y_RNA.119-201ENST00000363301 96 ntBASIC0.85□□□□□ -2.27
LDB2O43679 RNU6-1107P-201ENST00000364817 104 ntBASIC0.85□□□□□ -2.27
LDB2O43679 RNU6-1325P-201ENST00000364905 105 ntBASIC0.85□□□□□ -2.27
LDB2O43679 U8.6-201ENST00000364939 135 ntBASIC0.85□□□□□ -2.27
LDB2O43679 Y_RNA.323-201ENST00000365157 109 ntBASIC0.85□□□□□ -2.27
LDB2O43679 RNU6-1335P-201ENST00000365426 107 ntBASIC0.85□□□□□ -2.27
LDB2O43679 AL353813.1-201ENST00000440700 253 ntBASIC0.85□□□□□ -2.27
LDB2O43679 SNORA25.16-201ENST00000516741 121 ntBASIC0.85□□□□□ -2.27
LDB2O43679 Y_RNA.709-201ENST00000516952 92 ntBASIC0.85□□□□□ -2.27
LDB2O43679 DEFB131E-201ENST00000532329 154 ntBASIC0.85□□□□□ -2.27
LDB2O43679 MIR5009-201ENST00000578736 100 ntBASIC0.85□□□□□ -2.27
LDB2O43679 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
LDB2O43679 MIR34C-201ENST00000384831 77 ntBASIC0.84□□□□□ -2.27
LDB2O43679 MIR520H-201ENST00000385126 88 ntBASIC0.84□□□□□ -2.27
LDB2O43679 AP003327.1-201ENST00000529684 127 ntBASIC0.84□□□□□ -2.27
LDB2O43679 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.84□□□□□ -2.27
LDB2O43679 AL512310.12-203ENST00000640543 90 ntBASIC0.84□□□□□ -2.27
LDB2O43679 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.83□□□□□ -2.28
LDB2O43679 RNU6-215P-201ENST00000365169 102 ntBASIC0.83□□□□□ -2.28
LDB2O43679 Y_RNA.360-201ENST00000365512 102 ntBASIC0.83□□□□□ -2.28
LDB2O43679 RNU6-1014P-201ENST00000383940 103 ntBASIC0.83□□□□□ -2.28
LDB2O43679 MIR605-201ENST00000385078 83 ntBASIC0.83□□□□□ -2.28
LDB2O43679 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.83□□□□□ -2.28
LDB2O43679 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
LDB2O43679 RNU6-531P-201ENST00000516694 104 ntBASIC0.83□□□□□ -2.28
LDB2O43679 MIR4694-201ENST00000578534 80 ntBASIC0.83□□□□□ -2.28
LDB2O43679 AC090897.1-201ENST00000580909 226 ntBASIC0.83□□□□□ -2.28
LDB2O43679 AC008608.1-201ENST00000603910 127 ntBASIC0.83□□□□□ -2.28
LDB2O43679 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
LDB2O43679 RNU6-1201P-201ENST00000384227 107 ntBASIC0.82□□□□□ -2.28
LDB2O43679 SNORD38.2-201ENST00000384470 69 ntBASIC0.82□□□□□ -2.28
LDB2O43679 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
LDB2O43679 CYP3A137P-201ENST00000562436 69 ntBASIC0.82□□□□□ -2.28
LDB2O43679 Y_RNA.377-201ENST00000365644 108 ntBASIC0.81□□□□□ -2.28
LDB2O43679 SNORD20-201ENST00000384550 80 ntBASIC0.81□□□□□ -2.28
LDB2O43679 RNU6-448P-201ENST00000517052 107 ntBASIC0.81□□□□□ -2.28
LDB2O43679 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
LDB2O43679 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
LDB2O43679 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
LDB2O43679 RNY3P2-201ENST00000362918 102 ntBASIC0.8□□□□□ -2.28
LDB2O43679 SNORD38.1-201ENST00000363863 68 ntBASIC0.8□□□□□ -2.28
LDB2O43679 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
LDB2O43679 MIR573-201ENST00000384964 99 ntBASIC0.8□□□□□ -2.28
LDB2O43679 MIR577-201ENST00000385196 96 ntBASIC0.8□□□□□ -2.28
LDB2O43679 RNY4P18-201ENST00000391107 89 ntBASIC0.8□□□□□ -2.28
LDB2O43679 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
LDB2O43679 SNORD99-201ENST00000408612 74 ntBASIC0.8□□□□□ -2.28
LDB2O43679 RNU6-919P-201ENST00000516731 104 ntBASIC0.8□□□□□ -2.28
LDB2O43679 RNU6-1006P-201ENST00000516998 103 ntBASIC0.8□□□□□ -2.28
LDB2O43679 MIR4500-201ENST00000579472 76 ntBASIC0.8□□□□□ -2.28
LDB2O43679 AL353765.1-201ENST00000605514 183 ntBASIC0.8□□□□□ -2.28
LDB2O43679 AL442128.1-201ENST00000615151 90 ntBASIC0.8□□□□□ -2.28
LDB2O43679 MIR101-2-201ENST00000362195 79 ntBASIC0.79□□□□□ -2.28
LDB2O43679 Y_RNA.697-201ENST00000516776 113 ntBASIC0.79□□□□□ -2.28
LDB2O43679 MIR5000-201ENST00000577717 103 ntBASIC0.79□□□□□ -2.28
LDB2O43679 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
LDB2O43679 RNU6-832P-201ENST00000363319 107 ntBASIC0.78□□□□□ -2.28
LDB2O43679 Y_RNA.163-201ENST00000363702 113 ntBASIC0.78□□□□□ -2.28
LDB2O43679 Y_RNA.536-201ENST00000384621 113 ntBASIC0.78□□□□□ -2.28
LDB2O43679 MIR1302-5-201ENST00000408164 150 ntBASIC0.78□□□□□ -2.28
LDB2O43679 SNORD100-201ENST00000408573 76 ntBASIC0.78□□□□□ -2.28
LDB2O43679 ACA64.5-201ENST00000516207 127 ntBASIC0.78□□□□□ -2.28
LDB2O43679 AC096720.1-201ENST00000604441 183 ntBASIC0.78□□□□□ -2.28
LDB2O43679 RNU6-1099P-201ENST00000363533 107 ntBASIC0.77□□□□□ -2.29
LDB2O43679 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
LDB2O43679 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.77□□□□□ -2.29
LDB2O43679 AL035461.1-201ENST00000421490 332 ntBASIC0.77□□□□□ -2.29
LDB2O43679 AC244098.3-201ENST00000424803 96 ntBASIC0.77□□□□□ -2.29
LDB2O43679 AC004941.2-201ENST00000427009 228 ntBASIC0.77□□□□□ -2.29
LDB2O43679 SNRPGP12-201ENST00000449481 213 ntBASIC0.77□□□□□ -2.29
LDB2O43679 AC002350.1-201ENST00000490759 375 ntBASIC0.77□□□□□ -2.29
LDB2O43679 AC141557.1-201ENST00000540982 400 ntBASIC0.77□□□□□ -2.29
LDB2O43679 Y_RNA.56-201ENST00000362798 112 ntBASIC0.76□□□□□ -2.29
LDB2O43679 Y_RNA.78-201ENST00000362970 110 ntBASIC0.76□□□□□ -2.29
LDB2O43679 RNU4-36P-201ENST00000364294 144 ntBASIC0.76□□□□□ -2.29
LDB2O43679 Y_RNA.247-201ENST00000364500 92 ntBASIC0.76□□□□□ -2.29
LDB2O43679 RNU6-571P-201ENST00000384128 107 ntBASIC0.76□□□□□ -2.29
LDB2O43679 RNU6-106P-201ENST00000384405 107 ntBASIC0.76□□□□□ -2.29
LDB2O43679 RNU6-291P-201ENST00000384720 107 ntBASIC0.76□□□□□ -2.29
LDB2O43679 RNU6-535P-201ENST00000384722 107 ntBASIC0.76□□□□□ -2.29
LDB2O43679 MIR608-201ENST00000384820 100 ntBASIC0.76□□□□□ -2.29
LDB2O43679 RNA5SP436-201ENST00000516020 115 ntBASIC0.76□□□□□ -2.29
LDB2O43679 MTND5P40-201ENST00000559945 246 ntBASIC0.76□□□□□ -2.29
LDB2O43679 AC011195.1-201ENST00000578177 177 ntBASIC0.76□□□□□ -2.29
LDB2O43679 RNU7-10P-201ENST00000607194 63 ntBASIC0.76□□□□□ -2.29
LDB2O43679 uc_338.28-201ENST00000612082 187 ntBASIC0.76□□□□□ -2.29
LDB2O43679 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.76□□□□□ -2.29
LDB2O43679 Y_RNA.10-201ENST00000362371 110 ntBASIC0.75□□□□□ -2.29
LDB2O43679 Y_RNA.174-201ENST00000363781 105 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms