Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC012676.2-201ENST00000619258 186 ntBASIC1.2□□□□□ -2.22
SMAD6O43541 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SMAD6O43541 MIR337-201ENST00000362281 93 ntBASIC1.19□□□□□ -2.22
SMAD6O43541 Y_RNA.168-201ENST00000363740 102 ntBASIC1.19□□□□□ -2.22
SMAD6O43541 Y_RNA.173-201ENST00000363776 113 ntBASIC1.19□□□□□ -2.22
SMAD6O43541 Y_RNA.219-201ENST00000364232 113 ntBASIC1.19□□□□□ -2.22
SMAD6O43541 RNY1P2-201ENST00000364820 117 ntBASIC1.19□□□□□ -2.22
SMAD6O43541 MIR1255A-201ENST00000408338 113 ntBASIC1.19□□□□□ -2.22
SMAD6O43541 RNU6-613P-201ENST00000410412 108 ntBASIC1.19□□□□□ -2.22
SMAD6O43541 Y_RNA.676-201ENST00000516393 96 ntBASIC1.19□□□□□ -2.22
SMAD6O43541 RNU11-2P-201ENST00000516898 142 ntBASIC1.19□□□□□ -2.22
SMAD6O43541 AL512310.8-201ENST00000550183 120 ntBASIC1.19□□□□□ -2.22
SMAD6O43541 MTND5P40-201ENST00000559945 246 ntBASIC1.19□□□□□ -2.22
SMAD6O43541 AC138749.4-201ENST00000563970 127 ntBASIC1.19□□□□□ -2.22
SMAD6O43541 AC090897.1-201ENST00000580909 226 ntBASIC1.19□□□□□ -2.22
SMAD6O43541 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
SMAD6O43541 RNU6-1125P-201ENST00000363601 107 ntBASIC1.18□□□□□ -2.22
SMAD6O43541 SNORD116-10-201ENST00000363791 102 ntBASIC1.18□□□□□ -2.22
SMAD6O43541 RNY1P1-201ENST00000364372 112 ntBASIC1.18□□□□□ -2.22
SMAD6O43541 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SMAD6O43541 MIR8070-201ENST00000616510 88 ntBASIC1.18□□□□□ -2.22
SMAD6O43541 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.18□□□□□ -2.22
SMAD6O43541 U6.109-201ENST00000636749 87 ntBASIC1.18□□□□□ -2.22
SMAD6O43541 HSBP1P2-201ENST00000299671 229 ntBASIC1.17□□□□□ -2.22
SMAD6O43541 MIR377-201ENST00000362145 69 ntBASIC1.17□□□□□ -2.22
SMAD6O43541 Y_RNA.191-201ENST00000363972 113 ntBASIC1.17□□□□□ -2.22
SMAD6O43541 RNU6-979P-201ENST00000383896 107 ntBASIC1.17□□□□□ -2.22
SMAD6O43541 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
SMAD6O43541 Y_RNA.620-201ENST00000411009 88 ntBASIC1.17□□□□□ -2.22
SMAD6O43541 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.17□□□□□ -2.22
SMAD6O43541 Y_RNA.685-201ENST00000516532 108 ntBASIC1.17□□□□□ -2.22
SMAD6O43541 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.17□□□□□ -2.22
SMAD6O43541 RNA5SP327-201ENST00000362494 101 ntBASIC1.16□□□□□ -2.22
SMAD6O43541 RNA5SP133-201ENST00000363368 119 ntBASIC1.16□□□□□ -2.22
SMAD6O43541 Y_RNA.313-201ENST00000365095 103 ntBASIC1.16□□□□□ -2.22
SMAD6O43541 RNU6-580P-201ENST00000365159 107 ntBASIC1.16□□□□□ -2.22
SMAD6O43541 RNU6-1276P-201ENST00000365372 104 ntBASIC1.16□□□□□ -2.22
SMAD6O43541 SNORD116-22-201ENST00000384430 92 ntBASIC1.16□□□□□ -2.22
SMAD6O43541 SNORA2B-201ENST00000384583 137 ntBASIC1.16□□□□□ -2.22
SMAD6O43541 RNY1P4-201ENST00000384595 115 ntBASIC1.16□□□□□ -2.22
SMAD6O43541 MIR181B2-201ENST00000385004 89 ntBASIC1.16□□□□□ -2.22
SMAD6O43541 MT-TF-201ENST00000387314 71 ntBASIC1.16□□□□□ -2.22
SMAD6O43541 MIR4500-201ENST00000579472 76 ntBASIC1.16□□□□□ -2.22
SMAD6O43541 MIR5588-201ENST00000581890 63 ntBASIC1.16□□□□□ -2.22
SMAD6O43541 MIR4668-201ENST00000582284 70 ntBASIC1.16□□□□□ -2.22
SMAD6O43541 IGLL4P-201ENST00000614590 133 ntBASIC1.16□□□□□ -2.22
SMAD6O43541 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
SMAD6O43541 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
SMAD6O43541 Y_RNA.119-201ENST00000363301 96 ntBASIC1.15□□□□□ -2.23
SMAD6O43541 SNORD115-27-201ENST00000364430 82 ntBASIC1.15□□□□□ -2.23
SMAD6O43541 AC048334.1-201ENST00000477975 159 ntBASIC1.15□□□□□ -2.23
SMAD6O43541 AL513043.2-201ENST00000573941 143 ntBASIC1.15□□□□□ -2.23
SMAD6O43541 AC025521.1-201ENST00000621624 286 ntBASIC1.15□□□□□ -2.23
SMAD6O43541 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.15□□□□□ -2.23
SMAD6O43541 Y_RNA.609-201ENST00000410669 89 ntBASIC1.14□□□□□ -2.23
SMAD6O43541 RNU4-83P-201ENST00000410863 133 ntBASIC1.14□□□□□ -2.23
SMAD6O43541 SNRPGP12-201ENST00000449481 213 ntBASIC1.14□□□□□ -2.23
SMAD6O43541 snoU13.21-201ENST00000459368 105 ntBASIC1.14□□□□□ -2.23
SMAD6O43541 OR2A41P-201ENST00000473586 105 ntBASIC1.14□□□□□ -2.23
SMAD6O43541 RN7SKP88-201ENST00000516847 250 ntBASIC1.14□□□□□ -2.23
SMAD6O43541 7SK.8-201ENST00000612110 250 ntBASIC1.14□□□□□ -2.23
SMAD6O43541 7SK.11-201ENST00000615477 250 ntBASIC1.14□□□□□ -2.23
SMAD6O43541 7SK.13-201ENST00000622040 250 ntBASIC1.14□□□□□ -2.23
SMAD6O43541 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
SMAD6O43541 Y_RNA.330-201ENST00000365230 109 ntBASIC1.13□□□□□ -2.23
SMAD6O43541 RNU6-480P-201ENST00000384332 107 ntBASIC1.13□□□□□ -2.23
SMAD6O43541 SNORA75.2-201ENST00000391138 150 ntBASIC1.13□□□□□ -2.23
SMAD6O43541 SNORA75.3-201ENST00000391231 150 ntBASIC1.13□□□□□ -2.23
SMAD6O43541 RNU6-1054P-201ENST00000411293 104 ntBASIC1.13□□□□□ -2.23
SMAD6O43541 BX276092.1-201ENST00000427368 251 ntBASIC1.13□□□□□ -2.23
SMAD6O43541 MIR18B-201ENST00000454574 71 ntBASIC1.13□□□□□ -2.23
SMAD6O43541 SNORA31.2-201ENST00000516019 134 ntBASIC1.13□□□□□ -2.23
SMAD6O43541 RNA5SP102-201ENST00000516865 106 ntBASIC1.13□□□□□ -2.23
SMAD6O43541 AC006160.2-201ENST00000637708 154 ntBASIC1.13□□□□□ -2.23
SMAD6O43541 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
SMAD6O43541 AC008163.1-202ENST00000636004 2889 ntBASIC1.12□□□□□ -2.23
SMAD6O43541 MIR96-201ENST00000362288 78 ntBASIC1.12□□□□□ -2.23
SMAD6O43541 Y_RNA.363-201ENST00000365529 113 ntBASIC1.12□□□□□ -2.23
SMAD6O43541 Y_RNA.588-201ENST00000391254 102 ntBASIC1.12□□□□□ -2.23
SMAD6O43541 MIR1276-201ENST00000408707 83 ntBASIC1.12□□□□□ -2.23
SMAD6O43541 SNORD93-201ENST00000408813 74 ntBASIC1.12□□□□□ -2.23
SMAD6O43541 RNU7-171P-201ENST00000459581 62 ntBASIC1.12□□□□□ -2.23
SMAD6O43541 SNORA25.16-201ENST00000516741 121 ntBASIC1.12□□□□□ -2.23
SMAD6O43541 RNU6-850P-201ENST00000516934 103 ntBASIC1.12□□□□□ -2.23
SMAD6O43541 MIR4491-201ENST00000581087 68 ntBASIC1.12□□□□□ -2.23
SMAD6O43541 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.12□□□□□ -2.23
SMAD6O43541 MIR548BB-201ENST00000626714 66 ntBASIC1.12□□□□□ -2.23
SMAD6O43541 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SMAD6O43541 SNORD114-27-201ENST00000363766 70 ntBASIC1.11□□□□□ -2.23
SMAD6O43541 RNU1-36P-201ENST00000365130 165 ntBASIC1.11□□□□□ -2.23
SMAD6O43541 Y_RNA.437-201ENST00000384113 113 ntBASIC1.11□□□□□ -2.23
SMAD6O43541 Y_RNA.611-201ENST00000410682 108 ntBASIC1.11□□□□□ -2.23
SMAD6O43541 SNORD83.1-201ENST00000411362 77 ntBASIC1.11□□□□□ -2.23
SMAD6O43541 AL591704.2-201ENST00000421658 181 ntBASIC1.11□□□□□ -2.23
SMAD6O43541 AC015818.7-201ENST00000428754 109 ntBASIC1.11□□□□□ -2.23
SMAD6O43541 AC087499.7-201ENST00000441958 109 ntBASIC1.11□□□□□ -2.23
SMAD6O43541 RNU6-531P-201ENST00000516694 104 ntBASIC1.11□□□□□ -2.23
SMAD6O43541 AC036111.3-201ENST00000526389 112 ntBASIC1.11□□□□□ -2.23
SMAD6O43541 MIR4666B-201ENST00000578142 81 ntBASIC1.11□□□□□ -2.23
SMAD6O43541 MIR4295-201ENST00000585286 85 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms