Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SNORD38B-202ENST00000625943 69 ntBASIC1.66□□□□□ -2.14
FOXN1O15353 MIR181B2-201ENST00000385004 89 ntBASIC1.65□□□□□ -2.15
FOXN1O15353 AC023790.1-201ENST00000482174 347 ntBASIC1.65□□□□□ -2.15
FOXN1O15353 MTND5P40-201ENST00000559945 246 ntBASIC1.65□□□□□ -2.15
FOXN1O15353 RNU6-24P-201ENST00000384440 107 ntBASIC1.64□□□□□ -2.15
FOXN1O15353 SNORA2B-201ENST00000384583 137 ntBASIC1.64□□□□□ -2.15
FOXN1O15353 MIR653-201ENST00000385279 96 ntBASIC1.64□□□□□ -2.15
FOXN1O15353 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
FOXN1O15353 Y_RNA.607-201ENST00000410597 98 ntBASIC1.64□□□□□ -2.15
FOXN1O15353 AC244023.1-201ENST00000426884 112 ntBASIC1.64□□□□□ -2.15
FOXN1O15353 AC141846.1-201ENST00000568348 142 ntBASIC1.64□□□□□ -2.15
FOXN1O15353 AC242498.1-201ENST00000604134 111 ntBASIC1.64□□□□□ -2.15
FOXN1O15353 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
FOXN1O15353 RNU6-524P-201ENST00000384270 107 ntBASIC1.63□□□□□ -2.15
FOXN1O15353 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
FOXN1O15353 RNA5SP237-201ENST00000410414 113 ntBASIC1.63□□□□□ -2.15
FOXN1O15353 AC027119.1-201ENST00000440877 241 ntBASIC1.63□□□□□ -2.15
FOXN1O15353 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.63□□□□□ -2.15
FOXN1O15353 PRELID3BP2-201ENST00000605362 201 ntBASIC1.63□□□□□ -2.15
FOXN1O15353 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.63□□□□□ -2.15
FOXN1O15353 AP001362.1-201ENST00000625165 124 ntBASIC1.63□□□□□ -2.15
FOXN1O15353 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
FOXN1O15353 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
FOXN1O15353 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
FOXN1O15353 SNORD38.2-201ENST00000384470 69 ntBASIC1.62□□□□□ -2.15
FOXN1O15353 MIR676-201ENST00000390702 67 ntBASIC1.62□□□□□ -2.15
FOXN1O15353 AL161932.1-201ENST00000437408 146 ntBASIC1.62□□□□□ -2.15
FOXN1O15353 RNU6-322P-201ENST00000516010 103 ntBASIC1.62□□□□□ -2.15
FOXN1O15353 AL662814.1-201ENST00000617364 121 ntBASIC1.62□□□□□ -2.15
FOXN1O15353 Y_RNA.316-201ENST00000365118 111 ntBASIC1.61□□□□□ -2.15
FOXN1O15353 RNA5SP259-201ENST00000365541 109 ntBASIC1.61□□□□□ -2.15
FOXN1O15353 AL161935.2-201ENST00000414627 60 ntBASIC1.61□□□□□ -2.15
FOXN1O15353 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.61□□□□□ -2.15
FOXN1O15353 AC133485.1-201ENST00000567176 124 ntBASIC1.61□□□□□ -2.15
FOXN1O15353 MIR3192-201ENST00000584920 77 ntBASIC1.61□□□□□ -2.15
FOXN1O15353 Y_RNA.94-201ENST00000363068 106 ntBASIC1.6□□□□□ -2.15
FOXN1O15353 RNA5SP62-201ENST00000363457 110 ntBASIC1.6□□□□□ -2.15
FOXN1O15353 RNU6-1296P-201ENST00000383879 107 ntBASIC1.6□□□□□ -2.15
FOXN1O15353 RNU6-480P-201ENST00000384332 107 ntBASIC1.6□□□□□ -2.15
FOXN1O15353 SNORD41-201ENST00000386967 70 ntBASIC1.6□□□□□ -2.15
FOXN1O15353 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.6□□□□□ -2.15
FOXN1O15353 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.6□□□□□ -2.15
FOXN1O15353 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.15
FOXN1O15353 HSBP1P2-201ENST00000299671 229 ntBASIC1.59□□□□□ -2.15
FOXN1O15353 RNA5SP257-201ENST00000363023 116 ntBASIC1.59□□□□□ -2.15
FOXN1O15353 RNU6-949P-201ENST00000384040 107 ntBASIC1.59□□□□□ -2.15
FOXN1O15353 RNU6-439P-201ENST00000384188 106 ntBASIC1.59□□□□□ -2.15
FOXN1O15353 MIR519C-201ENST00000385053 87 ntBASIC1.59□□□□□ -2.15
FOXN1O15353 MIR513A1-201ENST00000385138 129 ntBASIC1.59□□□□□ -2.15
FOXN1O15353 MIR1302-7-201ENST00000408841 72 ntBASIC1.59□□□□□ -2.15
FOXN1O15353 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.59□□□□□ -2.15
FOXN1O15353 snoU13.2-201ENST00000459201 104 ntBASIC1.59□□□□□ -2.15
FOXN1O15353 SNORD111.1-201ENST00000516421 86 ntBASIC1.59□□□□□ -2.15
FOXN1O15353 RNU6-922P-201ENST00000516753 99 ntBASIC1.59□□□□□ -2.15
FOXN1O15353 RNY1P2-201ENST00000364820 117 ntBASIC1.58□□□□□ -2.16
FOXN1O15353 MIR588-201ENST00000384900 83 ntBASIC1.58□□□□□ -2.16
FOXN1O15353 RNU4-83P-201ENST00000410863 133 ntBASIC1.58□□□□□ -2.16
FOXN1O15353 JTBP1-201ENST00000441314 247 ntBASIC1.58□□□□□ -2.16
FOXN1O15353 AC004223.1-201ENST00000479840 271 ntBASIC1.58□□□□□ -2.16
FOXN1O15353 AC093729.1-201ENST00000513074 128 ntBASIC1.58□□□□□ -2.16
FOXN1O15353 RNU6-65P-201ENST00000516332 98 ntBASIC1.58□□□□□ -2.16
FOXN1O15353 RNA5SP121-201ENST00000516537 101 ntBASIC1.58□□□□□ -2.16
FOXN1O15353 SNORA44.1-201ENST00000517031 108 ntBASIC1.58□□□□□ -2.16
FOXN1O15353 AC036111.3-201ENST00000526389 112 ntBASIC1.58□□□□□ -2.16
FOXN1O15353 AC019288.1-201ENST00000557918 224 ntBASIC1.58□□□□□ -2.16
FOXN1O15353 MIR3198-2-201ENST00000577868 80 ntBASIC1.58□□□□□ -2.16
FOXN1O15353 SNORA77B-201ENST00000578179 125 ntBASIC1.58□□□□□ -2.16
FOXN1O15353 AC090897.1-201ENST00000580909 226 ntBASIC1.58□□□□□ -2.16
FOXN1O15353 AL590095.2-201ENST00000604136 117 ntBASIC1.58□□□□□ -2.16
FOXN1O15353 AL096861.1-201ENST00000610899 123 ntBASIC1.58□□□□□ -2.16
FOXN1O15353 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.58□□□□□ -2.16
FOXN1O15353 MIR8074-201ENST00000615081 81 ntBASIC1.58□□□□□ -2.16
FOXN1O15353 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
FOXN1O15353 SNORA25.3-201ENST00000363205 127 ntBASIC1.57□□□□□ -2.16
FOXN1O15353 RNA5SP133-201ENST00000363368 119 ntBASIC1.57□□□□□ -2.16
FOXN1O15353 Y_RNA.168-201ENST00000363740 102 ntBASIC1.57□□□□□ -2.16
FOXN1O15353 RNU6-776P-201ENST00000364403 104 ntBASIC1.57□□□□□ -2.16
FOXN1O15353 RNU6-1022P-201ENST00000365049 104 ntBASIC1.57□□□□□ -2.16
FOXN1O15353 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
FOXN1O15353 AC087499.7-201ENST00000441958 109 ntBASIC1.57□□□□□ -2.16
FOXN1O15353 RNU7-153P-201ENST00000516455 62 ntBASIC1.57□□□□□ -2.16
FOXN1O15353 AC138749.4-201ENST00000563970 127 ntBASIC1.57□□□□□ -2.16
FOXN1O15353 MIR3660-201ENST00000584845 100 ntBASIC1.57□□□□□ -2.16
FOXN1O15353 MIR4662A-201ENST00000637499 67 ntBASIC1.57□□□□□ -2.16
FOXN1O15353 RNA5SP48-201ENST00000363969 126 ntBASIC1.56□□□□□ -2.16
FOXN1O15353 MIR30A-201ENST00000385092 71 ntBASIC1.56□□□□□ -2.16
FOXN1O15353 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
FOXN1O15353 RNU6-519P-201ENST00000410590 108 ntBASIC1.56□□□□□ -2.16
FOXN1O15353 AC008834.1-201ENST00000511612 175 ntBASIC1.56□□□□□ -2.16
FOXN1O15353 RNA5SP330-201ENST00000517096 96 ntBASIC1.56□□□□□ -2.16
FOXN1O15353 AC068338.1-201ENST00000565567 176 ntBASIC1.56□□□□□ -2.16
FOXN1O15353 MIR4500-201ENST00000579472 76 ntBASIC1.56□□□□□ -2.16
FOXN1O15353 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
FOXN1O15353 MIR8066-201ENST00000617280 78 ntBASIC1.56□□□□□ -2.16
FOXN1O15353 MIR6740-201ENST00000618268 113 ntBASIC1.56□□□□□ -2.16
FOXN1O15353 AL109933.3-201ENST00000619095 188 ntBASIC1.56□□□□□ -2.16
FOXN1O15353 MIR563-201ENST00000385080 79 ntBASIC1.55□□□□□ -2.16
FOXN1O15353 MIR889-201ENST00000401280 79 ntBASIC1.55□□□□□ -2.16
FOXN1O15353 snoU13.25-201ENST00000458945 104 ntBASIC1.55□□□□□ -2.16
FOXN1O15353 AC140658.3-201ENST00000567603 271 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms