Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 MIR4287-201ENST00000579398 78 ntBASIC3.18□□□□□ -1.9
SPDYE4A6NLX3 AC008608.1-201ENST00000603910 127 ntBASIC3.18□□□□□ -1.9
SPDYE4A6NLX3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SPDYE4A6NLX3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SPDYE4A6NLX3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SPDYE4A6NLX3 SNORD1A-201ENST00000364968 72 ntBASIC3.17□□□□□ -1.9
SPDYE4A6NLX3 RNU6-364P-201ENST00000384387 107 ntBASIC3.17□□□□□ -1.9
SPDYE4A6NLX3 RNA5SP184-201ENST00000411071 108 ntBASIC3.17□□□□□ -1.9
SPDYE4A6NLX3 AC110620.1-201ENST00000416042 228 ntBASIC3.17□□□□□ -1.9
SPDYE4A6NLX3 AC244505.6-201ENST00000452829 130 ntBASIC3.17□□□□□ -1.9
SPDYE4A6NLX3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.17□□□□□ -1.9
SPDYE4A6NLX3 AL078603.1-201ENST00000603824 313 ntBASIC3.17□□□□□ -1.9
SPDYE4A6NLX3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SPDYE4A6NLX3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SPDYE4A6NLX3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SPDYE4A6NLX3 RNU6-669P-201ENST00000365575 107 ntBASIC3.16□□□□□ -1.9
SPDYE4A6NLX3 MIR196B-201ENST00000384852 84 ntBASIC3.16□□□□□ -1.9
SPDYE4A6NLX3 AC087499.2-201ENST00000432861 149 ntBASIC3.16□□□□□ -1.9
SPDYE4A6NLX3 Y_RNA.258-201ENST00000364613 105 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 RPS26P5-201ENST00000418544 335 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 RNU6-165P-201ENST00000517170 99 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 MIR3937-201ENST00000580135 106 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 MIR3670-2-201ENST00000582974 65 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 MIR4676-201ENST00000583078 72 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 MIR3670-1-201ENST00000584160 65 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 MIR3670-3-201ENST00000584855 65 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 MIR3670-4-201ENST00000612260 65 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 RNU6-851P-201ENST00000384565 107 ntBASIC3.14□□□□□ -1.91
SPDYE4A6NLX3 SNORD111-201ENST00000408139 94 ntBASIC3.14□□□□□ -1.91
SPDYE4A6NLX3 RNU6-141P-201ENST00000410499 105 ntBASIC3.14□□□□□ -1.91
SPDYE4A6NLX3 AL691482.2-201ENST00000457453 84 ntBASIC3.14□□□□□ -1.91
SPDYE4A6NLX3 MIR5194-201ENST00000582634 120 ntBASIC3.14□□□□□ -1.91
SPDYE4A6NLX3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.14□□□□□ -1.91
SPDYE4A6NLX3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.14□□□□□ -1.91
SPDYE4A6NLX3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SPDYE4A6NLX3 SNORA16B-201ENST00000364674 135 ntBASIC3.13□□□□□ -1.91
SPDYE4A6NLX3 SNORA40.6-201ENST00000391153 128 ntBASIC3.13□□□□□ -1.91
SPDYE4A6NLX3 RNA5SP508-201ENST00000411327 119 ntBASIC3.13□□□□□ -1.91
SPDYE4A6NLX3 MIR3162-201ENST00000581818 82 ntBASIC3.13□□□□□ -1.91
SPDYE4A6NLX3 SNORA9.2-201ENST00000365361 133 ntBASIC3.12□□□□□ -1.91
SPDYE4A6NLX3 MIR938-201ENST00000401216 83 ntBASIC3.12□□□□□ -1.91
SPDYE4A6NLX3 AC079600.2-201ENST00000550076 130 ntBASIC3.12□□□□□ -1.91
SPDYE4A6NLX3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SPDYE4A6NLX3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SPDYE4A6NLX3 SUMO1P4-201ENST00000429430 302 ntBASIC3.11□□□□□ -1.91
SPDYE4A6NLX3 AC027335.2-201ENST00000624030 375 ntBASIC3.11□□□□□ -1.91
SPDYE4A6NLX3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SPDYE4A6NLX3 HMGN2P23-201ENST00000456759 269 ntBASIC3.1□□□□□ -1.91
SPDYE4A6NLX3 RNU7-40P-201ENST00000516397 64 ntBASIC3.1□□□□□ -1.91
SPDYE4A6NLX3 RNU7-13P-201ENST00000516413 62 ntBASIC3.1□□□□□ -1.91
SPDYE4A6NLX3 SNORA44.1-201ENST00000517031 108 ntBASIC3.1□□□□□ -1.91
SPDYE4A6NLX3 AC106800.4-201ENST00000614905 153 ntBASIC3.1□□□□□ -1.91
SPDYE4A6NLX3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SPDYE4A6NLX3 SNORA67.1-201ENST00000364749 141 ntBASIC3.09□□□□□ -1.91
SPDYE4A6NLX3 SNORD75.2-201ENST00000408784 58 ntBASIC3.09□□□□□ -1.91
SPDYE4A6NLX3 RNU1-41P-201ENST00000516161 162 ntBASIC3.09□□□□□ -1.91
SPDYE4A6NLX3 RNU1-48P-201ENST00000516400 162 ntBASIC3.09□□□□□ -1.91
SPDYE4A6NLX3 MIR4299-201ENST00000577899 72 ntBASIC3.09□□□□□ -1.91
SPDYE4A6NLX3 AC104984.5-201ENST00000586878 94 ntBASIC3.09□□□□□ -1.91
SPDYE4A6NLX3 AC103810.8-201ENST00000607347 118 ntBASIC3.09□□□□□ -1.91
SPDYE4A6NLX3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SPDYE4A6NLX3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 RNU6-614P-201ENST00000384369 107 ntBASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 MIR30A-201ENST00000385092 71 ntBASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 MIR216B-201ENST00000390186 82 ntBASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 MTND4LP1-201ENST00000446263 157 ntBASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 AC048334.1-201ENST00000477975 159 ntBASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 U6.59-201ENST00000615686 107 ntBASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 MIR6715A-201ENST00000615929 79 ntBASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 AC010297.1-201ENST00000623948 149 ntBASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 AC062016.1-201ENST00000355719 319 ntBASIC3.07□□□□□ -1.92
SPDYE4A6NLX3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SPDYE4A6NLX3 SNORA75.2-201ENST00000391138 150 ntBASIC3.07□□□□□ -1.92
SPDYE4A6NLX3 SNORA75.3-201ENST00000391231 150 ntBASIC3.07□□□□□ -1.92
SPDYE4A6NLX3 RNU7-102P-201ENST00000458948 62 ntBASIC3.07□□□□□ -1.92
SPDYE4A6NLX3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.07□□□□□ -1.92
SPDYE4A6NLX3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 RNU6-1187P-201ENST00000364771 110 ntBASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 DEFA7P-201ENST00000382676 285 ntBASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 RNU7-24P-201ENST00000458867 62 ntBASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 SNORD109B-201ENST00000458961 67 ntBASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 SNORD109A-201ENST00000459128 67 ntBASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 AL512310.8-201ENST00000550183 120 ntBASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 AL109933.3-201ENST00000619095 188 ntBASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SPDYE4A6NLX3 RNA5SP181-201ENST00000410246 98 ntBASIC3.05□□□□□ -1.92
SPDYE4A6NLX3 AL513328.1-201ENST00000446460 224 ntBASIC3.05□□□□□ -1.92
SPDYE4A6NLX3 RNU6-982P-201ENST00000516216 102 ntBASIC3.05□□□□□ -1.92
SPDYE4A6NLX3 FO624990.1-201ENST00000636373 85 ntBASIC3.05□□□□□ -1.92
SPDYE4A6NLX3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.05□□□□□ -1.92
SPDYE4A6NLX3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SPDYE4A6NLX3 MIR633-201ENST00000384821 98 ntBASIC3.04□□□□□ -1.92
SPDYE4A6NLX3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC3.04□□□□□ -1.92
SPDYE4A6NLX3 AC023827.1-201ENST00000569247 97 ntBASIC3.04□□□□□ -1.92
SPDYE4A6NLX3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms