Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 MIR4287-201ENST00000579398 78 ntBASIC3.18□□□□□ -1.9
SPDYE4A6NLX3 AC008608.1-201ENST00000603910 127 ntBASIC3.18□□□□□ -1.9
SPDYE4A6NLX3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SPDYE4A6NLX3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SPDYE4A6NLX3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SPDYE4A6NLX3 SNORD1A-201ENST00000364968 72 ntBASIC3.17□□□□□ -1.9
SPDYE4A6NLX3 RNU6-364P-201ENST00000384387 107 ntBASIC3.17□□□□□ -1.9
SPDYE4A6NLX3 RNA5SP184-201ENST00000411071 108 ntBASIC3.17□□□□□ -1.9
SPDYE4A6NLX3 AC110620.1-201ENST00000416042 228 ntBASIC3.17□□□□□ -1.9
SPDYE4A6NLX3 AC244505.6-201ENST00000452829 130 ntBASIC3.17□□□□□ -1.9
SPDYE4A6NLX3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.17□□□□□ -1.9
SPDYE4A6NLX3 AL078603.1-201ENST00000603824 313 ntBASIC3.17□□□□□ -1.9
SPDYE4A6NLX3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SPDYE4A6NLX3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SPDYE4A6NLX3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SPDYE4A6NLX3 RNU6-669P-201ENST00000365575 107 ntBASIC3.16□□□□□ -1.9
SPDYE4A6NLX3 MIR196B-201ENST00000384852 84 ntBASIC3.16□□□□□ -1.9
SPDYE4A6NLX3 AC087499.2-201ENST00000432861 149 ntBASIC3.16□□□□□ -1.9
SPDYE4A6NLX3 Y_RNA.258-201ENST00000364613 105 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 RPS26P5-201ENST00000418544 335 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 RNU6-165P-201ENST00000517170 99 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 MIR3937-201ENST00000580135 106 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 MIR3670-2-201ENST00000582974 65 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 MIR4676-201ENST00000583078 72 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 MIR3670-1-201ENST00000584160 65 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 MIR3670-3-201ENST00000584855 65 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 MIR3670-4-201ENST00000612260 65 ntBASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SPDYE4A6NLX3 RNU6-851P-201ENST00000384565 107 ntBASIC3.14□□□□□ -1.91
SPDYE4A6NLX3 SNORD111-201ENST00000408139 94 ntBASIC3.14□□□□□ -1.91
SPDYE4A6NLX3 RNU6-141P-201ENST00000410499 105 ntBASIC3.14□□□□□ -1.91
SPDYE4A6NLX3 AL691482.2-201ENST00000457453 84 ntBASIC3.14□□□□□ -1.91
SPDYE4A6NLX3 MIR5194-201ENST00000582634 120 ntBASIC3.14□□□□□ -1.91
SPDYE4A6NLX3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.14□□□□□ -1.91
SPDYE4A6NLX3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.14□□□□□ -1.91
SPDYE4A6NLX3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SPDYE4A6NLX3 SNORA16B-201ENST00000364674 135 ntBASIC3.13□□□□□ -1.91
SPDYE4A6NLX3 SNORA40.6-201ENST00000391153 128 ntBASIC3.13□□□□□ -1.91
SPDYE4A6NLX3 RNA5SP508-201ENST00000411327 119 ntBASIC3.13□□□□□ -1.91
SPDYE4A6NLX3 MIR3162-201ENST00000581818 82 ntBASIC3.13□□□□□ -1.91
SPDYE4A6NLX3 SNORA9.2-201ENST00000365361 133 ntBASIC3.12□□□□□ -1.91
SPDYE4A6NLX3 MIR938-201ENST00000401216 83 ntBASIC3.12□□□□□ -1.91
SPDYE4A6NLX3 AC079600.2-201ENST00000550076 130 ntBASIC3.12□□□□□ -1.91
SPDYE4A6NLX3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SPDYE4A6NLX3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SPDYE4A6NLX3 SUMO1P4-201ENST00000429430 302 ntBASIC3.11□□□□□ -1.91
SPDYE4A6NLX3 AC027335.2-201ENST00000624030 375 ntBASIC3.11□□□□□ -1.91
SPDYE4A6NLX3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SPDYE4A6NLX3 HMGN2P23-201ENST00000456759 269 ntBASIC3.1□□□□□ -1.91
SPDYE4A6NLX3 RNU7-40P-201ENST00000516397 64 ntBASIC3.1□□□□□ -1.91
SPDYE4A6NLX3 RNU7-13P-201ENST00000516413 62 ntBASIC3.1□□□□□ -1.91
SPDYE4A6NLX3 SNORA44.1-201ENST00000517031 108 ntBASIC3.1□□□□□ -1.91
SPDYE4A6NLX3 AC106800.4-201ENST00000614905 153 ntBASIC3.1□□□□□ -1.91
SPDYE4A6NLX3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SPDYE4A6NLX3 SNORA67.1-201ENST00000364749 141 ntBASIC3.09□□□□□ -1.91
SPDYE4A6NLX3 SNORD75.2-201ENST00000408784 58 ntBASIC3.09□□□□□ -1.91
SPDYE4A6NLX3 RNU1-41P-201ENST00000516161 162 ntBASIC3.09□□□□□ -1.91
SPDYE4A6NLX3 RNU1-48P-201ENST00000516400 162 ntBASIC3.09□□□□□ -1.91
SPDYE4A6NLX3 MIR4299-201ENST00000577899 72 ntBASIC3.09□□□□□ -1.91
SPDYE4A6NLX3 AC104984.5-201ENST00000586878 94 ntBASIC3.09□□□□□ -1.91
SPDYE4A6NLX3 AC103810.8-201ENST00000607347 118 ntBASIC3.09□□□□□ -1.91
SPDYE4A6NLX3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SPDYE4A6NLX3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 RNU6-614P-201ENST00000384369 107 ntBASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 MIR30A-201ENST00000385092 71 ntBASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 MIR216B-201ENST00000390186 82 ntBASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 MTND4LP1-201ENST00000446263 157 ntBASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 AC048334.1-201ENST00000477975 159 ntBASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 U6.59-201ENST00000615686 107 ntBASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 MIR6715A-201ENST00000615929 79 ntBASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 AC010297.1-201ENST00000623948 149 ntBASIC3.08□□□□□ -1.92
SPDYE4A6NLX3 AC062016.1-201ENST00000355719 319 ntBASIC3.07□□□□□ -1.92
SPDYE4A6NLX3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SPDYE4A6NLX3 SNORA75.2-201ENST00000391138 150 ntBASIC3.07□□□□□ -1.92
SPDYE4A6NLX3 SNORA75.3-201ENST00000391231 150 ntBASIC3.07□□□□□ -1.92
SPDYE4A6NLX3 RNU7-102P-201ENST00000458948 62 ntBASIC3.07□□□□□ -1.92
SPDYE4A6NLX3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.07□□□□□ -1.92
SPDYE4A6NLX3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 RNU6-1187P-201ENST00000364771 110 ntBASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 DEFA7P-201ENST00000382676 285 ntBASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 RNU7-24P-201ENST00000458867 62 ntBASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 SNORD109B-201ENST00000458961 67 ntBASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 SNORD109A-201ENST00000459128 67 ntBASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 AL512310.8-201ENST00000550183 120 ntBASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 AL109933.3-201ENST00000619095 188 ntBASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.06□□□□□ -1.92
SPDYE4A6NLX3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SPDYE4A6NLX3 RNA5SP181-201ENST00000410246 98 ntBASIC3.05□□□□□ -1.92
SPDYE4A6NLX3 AL513328.1-201ENST00000446460 224 ntBASIC3.05□□□□□ -1.92
SPDYE4A6NLX3 RNU6-982P-201ENST00000516216 102 ntBASIC3.05□□□□□ -1.92
SPDYE4A6NLX3 FO624990.1-201ENST00000636373 85 ntBASIC3.05□□□□□ -1.92
SPDYE4A6NLX3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.05□□□□□ -1.92
SPDYE4A6NLX3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SPDYE4A6NLX3 MIR633-201ENST00000384821 98 ntBASIC3.04□□□□□ -1.92
SPDYE4A6NLX3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC3.04□□□□□ -1.92
SPDYE4A6NLX3 AC023827.1-201ENST00000569247 97 ntBASIC3.04□□□□□ -1.92
SPDYE4A6NLX3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms