Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 RNU6-905P-201ENST00000384434 107 ntBASIC-1.21□□□□□ -2.6
TRBV6-4A0A1B0GX49 SCARNA18B-201ENST00000458806 135 ntBASIC-1.21□□□□□ -2.6
TRBV6-4A0A1B0GX49 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.22□□□□□ -2.6
TRBV6-4A0A1B0GX49 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.22□□□□□ -2.6
TRBV6-4A0A1B0GX49 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.22□□□□□ -2.6
TRBV6-4A0A1B0GX49 RNU6-381P-201ENST00000391259 108 ntBASIC-1.22□□□□□ -2.6
TRBV6-4A0A1B0GX49 MIR1302-11-201ENST00000408051 138 ntBASIC-1.22□□□□□ -2.6
TRBV6-4A0A1B0GX49 MIR1302-9-201ENST00000408365 138 ntBASIC-1.22□□□□□ -2.6
TRBV6-4A0A1B0GX49 MIR1302-10-201ENST00000408734 138 ntBASIC-1.22□□□□□ -2.6
TRBV6-4A0A1B0GX49 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.22□□□□□ -2.6
TRBV6-4A0A1B0GX49 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.22□□□□□ -2.6
TRBV6-4A0A1B0GX49 RNU6-720P-201ENST00000516363 108 ntBASIC-1.22□□□□□ -2.6
TRBV6-4A0A1B0GX49 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.22□□□□□ -2.6
TRBV6-4A0A1B0GX49 MIR378F-201ENST00000578143 78 ntBASIC-1.22□□□□□ -2.6
TRBV6-4A0A1B0GX49 MIR1302-2-201ENST00000607096 138 ntBASIC-1.22□□□□□ -2.6
TRBV6-4A0A1B0GX49 MIR548O2-201ENST00000616090 70 ntBASIC-1.22□□□□□ -2.6
TRBV6-4A0A1B0GX49 MIR382-201ENST00000637119 76 ntBASIC-1.22□□□□□ -2.6
TRBV6-4A0A1B0GX49 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.23□□□□□ -2.61
TRBV6-4A0A1B0GX49 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.23□□□□□ -2.61
TRBV6-4A0A1B0GX49 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.23□□□□□ -2.61
TRBV6-4A0A1B0GX49 SNORD116-6-201ENST00000384711 96 ntBASIC-1.23□□□□□ -2.61
TRBV6-4A0A1B0GX49 SNORD77B-201ENST00000391112 67 ntBASIC-1.23□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.23□□□□□ -2.61
TRBV6-4A0A1B0GX49 MIR548E-201ENST00000408287 88 ntBASIC-1.23□□□□□ -2.61
TRBV6-4A0A1B0GX49 AL353813.1-201ENST00000440700 253 ntBASIC-1.23□□□□□ -2.61
TRBV6-4A0A1B0GX49 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.23□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNA5SP236-201ENST00000516169 116 ntBASIC-1.23□□□□□ -2.61
TRBV6-4A0A1B0GX49 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.23□□□□□ -2.61
TRBV6-4A0A1B0GX49 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.24□□□□□ -2.61
TRBV6-4A0A1B0GX49 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.24□□□□□ -2.61
TRBV6-4A0A1B0GX49 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.24□□□□□ -2.61
TRBV6-4A0A1B0GX49 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.24□□□□□ -2.61
TRBV6-4A0A1B0GX49 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.24□□□□□ -2.61
TRBV6-4A0A1B0GX49 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.24□□□□□ -2.61
TRBV6-4A0A1B0GX49 MIR34C-201ENST00000384831 77 ntBASIC-1.24□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNU7-152P-201ENST00000458982 64 ntBASIC-1.24□□□□□ -2.61
TRBV6-4A0A1B0GX49 snoU13.19-201ENST00000459148 104 ntBASIC-1.24□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNU7-164P-201ENST00000459221 62 ntBASIC-1.24□□□□□ -2.61
TRBV6-4A0A1B0GX49 SERF1AP1-201ENST00000514575 187 ntBASIC-1.24□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNA5SP470-201ENST00000516463 106 ntBASIC-1.24□□□□□ -2.61
TRBV6-4A0A1B0GX49 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.24□□□□□ -2.61
TRBV6-4A0A1B0GX49 AC090574.1-201ENST00000623186 233 ntBASIC-1.24□□□□□ -2.61
TRBV6-4A0A1B0GX49 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.25□□□□□ -2.61
TRBV6-4A0A1B0GX49 SNORD36A-201ENST00000362874 73 ntBASIC-1.25□□□□□ -2.61
TRBV6-4A0A1B0GX49 SNORD27-201ENST00000363981 72 ntBASIC-1.25□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNU4-24P-201ENST00000364565 139 ntBASIC-1.25□□□□□ -2.61
TRBV6-4A0A1B0GX49 SNORA63.7-201ENST00000365579 123 ntBASIC-1.25□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNU6-616P-201ENST00000384353 107 ntBASIC-1.25□□□□□ -2.61
TRBV6-4A0A1B0GX49 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.25□□□□□ -2.61
TRBV6-4A0A1B0GX49 SNORD18.2-201ENST00000459604 70 ntBASIC-1.25□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNU7-123P-201ENST00000515911 60 ntBASIC-1.25□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNU6-240P-201ENST00000516098 97 ntBASIC-1.25□□□□□ -2.61
TRBV6-4A0A1B0GX49 AL442663.2-201ENST00000554385 511 ntBASIC-1.25□□□□□ -2.61
TRBV6-4A0A1B0GX49 AC021443.1-201ENST00000604478 211 ntBASIC-1.25□□□□□ -2.61
TRBV6-4A0A1B0GX49 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.25□□□□□ -2.61
TRBV6-4A0A1B0GX49 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.26□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNU6-24P-201ENST00000384440 107 ntBASIC-1.26□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNU6-243P-201ENST00000391140 107 ntBASIC-1.26□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNU6-592P-201ENST00000411333 103 ntBASIC-1.26□□□□□ -2.61
TRBV6-4A0A1B0GX49 AL121914.1-201ENST00000450188 156 ntBASIC-1.26□□□□□ -2.61
TRBV6-4A0A1B0GX49 RN7SKP19-201ENST00000516016 252 ntBASIC-1.26□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNU6-762P-201ENST00000517107 102 ntBASIC-1.26□□□□□ -2.61
TRBV6-4A0A1B0GX49 AC138907.4-201ENST00000570107 226 ntBASIC-1.26□□□□□ -2.61
TRBV6-4A0A1B0GX49 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.27□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNU6-957P-201ENST00000363652 99 ntBASIC-1.27□□□□□ -2.61
TRBV6-4A0A1B0GX49 MIR216B-201ENST00000390186 82 ntBASIC-1.27□□□□□ -2.61
TRBV6-4A0A1B0GX49 AC138393.2-201ENST00000414742 246 ntBASIC-1.27□□□□□ -2.61
TRBV6-4A0A1B0GX49 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.27□□□□□ -2.61
TRBV6-4A0A1B0GX49 MIR4324-201ENST00000584846 72 ntBASIC-1.27□□□□□ -2.61
TRBV6-4A0A1B0GX49 snoR1.1-201ENST00000628177 80 ntBASIC-1.27□□□□□ -2.61
TRBV6-4A0A1B0GX49 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.28□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.28□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNU6-651P-201ENST00000411040 105 ntBASIC-1.28□□□□□ -2.61
TRBV6-4A0A1B0GX49 SNORD2.1-201ENST00000458762 69 ntBASIC-1.28□□□□□ -2.61
TRBV6-4A0A1B0GX49 snoU13.11-201ENST00000459219 104 ntBASIC-1.28□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNU6-976P-201ENST00000516086 111 ntBASIC-1.28□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNU6-277P-201ENST00000516272 106 ntBASIC-1.28□□□□□ -2.61
TRBV6-4A0A1B0GX49 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.28□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNY1P9-201ENST00000532431 109 ntBASIC-1.28□□□□□ -2.61
TRBV6-4A0A1B0GX49 RNU6-54P-201ENST00000365563 107 ntBASIC-1.29□□□□□ -2.62
TRBV6-4A0A1B0GX49 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.29□□□□□ -2.62
TRBV6-4A0A1B0GX49 snoU83B.1-201ENST00000517136 88 ntBASIC-1.29□□□□□ -2.62
TRBV6-4A0A1B0GX49 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.29□□□□□ -2.62
TRBV6-4A0A1B0GX49 MIR4306-201ENST00000583390 91 ntBASIC-1.29□□□□□ -2.62
TRBV6-4A0A1B0GX49 MIR6738-201ENST00000619620 64 ntBASIC-1.29□□□□□ -2.62
TRBV6-4A0A1B0GX49 AL365265.1-201ENST00000621045 234 ntBASIC-1.29□□□□□ -2.62
TRBV6-4A0A1B0GX49 RNU6-103P-201ENST00000363686 107 ntBASIC-1.3□□□□□ -2.62
TRBV6-4A0A1B0GX49 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.3□□□□□ -2.62
TRBV6-4A0A1B0GX49 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.3□□□□□ -2.62
TRBV6-4A0A1B0GX49 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.3□□□□□ -2.62
TRBV6-4A0A1B0GX49 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.3□□□□□ -2.62
TRBV6-4A0A1B0GX49 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.3□□□□□ -2.62
TRBV6-4A0A1B0GX49 MIR4696-201ENST00000581431 70 ntBASIC-1.3□□□□□ -2.62
TRBV6-4A0A1B0GX49 MIR6773-201ENST00000612812 74 ntBASIC-1.3□□□□□ -2.62
TRBV6-4A0A1B0GX49 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.31□□□□□ -2.62
TRBV6-4A0A1B0GX49 SNORD114-4-201ENST00000363962 75 ntBASIC-1.31□□□□□ -2.62
TRBV6-4A0A1B0GX49 SNORD115-23-201ENST00000364461 82 ntBASIC-1.31□□□□□ -2.62
TRBV6-4A0A1B0GX49 SNORD114-17-201ENST00000364699 75 ntBASIC-1.31□□□□□ -2.62
TRBV6-4A0A1B0GX49 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.31□□□□□ -2.62
TRBV6-4A0A1B0GX49 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms