Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.24□□□□□ -2.21
CCDC163A0A0D9SF12 RNU6-919P-201ENST00000516731 104 ntBASIC1.24□□□□□ -2.21
CCDC163A0A0D9SF12 MTND5P40-201ENST00000559945 246 ntBASIC1.24□□□□□ -2.21
CCDC163A0A0D9SF12 AC090897.1-201ENST00000580909 226 ntBASIC1.24□□□□□ -2.21
CCDC163A0A0D9SF12 MIR151B-201ENST00000584249 96 ntBASIC1.24□□□□□ -2.21
CCDC163A0A0D9SF12 AC008608.1-201ENST00000603910 127 ntBASIC1.24□□□□□ -2.21
CCDC163A0A0D9SF12 RNU6-215P-201ENST00000365169 102 ntBASIC1.23□□□□□ -2.21
CCDC163A0A0D9SF12 Y_RNA.360-201ENST00000365512 102 ntBASIC1.23□□□□□ -2.21
CCDC163A0A0D9SF12 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CCDC163A0A0D9SF12 MIR101-2-201ENST00000362195 79 ntBASIC1.22□□□□□ -2.21
CCDC163A0A0D9SF12 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
CCDC163A0A0D9SF12 RNY4P18-201ENST00000391107 89 ntBASIC1.22□□□□□ -2.21
CCDC163A0A0D9SF12 AL035461.1-201ENST00000421490 332 ntBASIC1.22□□□□□ -2.21
CCDC163A0A0D9SF12 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC163A0A0D9SF12 AC141557.1-201ENST00000540982 400 ntBASIC1.22□□□□□ -2.21
CCDC163A0A0D9SF12 AC025627.3-201ENST00000582078 182 ntBASIC1.22□□□□□ -2.21
CCDC163A0A0D9SF12 SNORD92-201ENST00000585078 85 ntBASIC1.22□□□□□ -2.21
CCDC163A0A0D9SF12 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CCDC163A0A0D9SF12 RNU6-44P-201ENST00000384045 107 ntBASIC1.21□□□□□ -2.22
CCDC163A0A0D9SF12 MIR1302-5-201ENST00000408164 150 ntBASIC1.21□□□□□ -2.22
CCDC163A0A0D9SF12 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.21□□□□□ -2.22
CCDC163A0A0D9SF12 RNU6-1194P-201ENST00000516208 104 ntBASIC1.21□□□□□ -2.22
CCDC163A0A0D9SF12 RNA5SP255-201ENST00000516370 107 ntBASIC1.21□□□□□ -2.22
CCDC163A0A0D9SF12 RNA5SP61-201ENST00000516453 100 ntBASIC1.21□□□□□ -2.22
CCDC163A0A0D9SF12 RNU6-1018P-201ENST00000516577 106 ntBASIC1.21□□□□□ -2.22
CCDC163A0A0D9SF12 Y_RNA.697-201ENST00000516776 113 ntBASIC1.21□□□□□ -2.22
CCDC163A0A0D9SF12 MIR8066-201ENST00000617280 78 ntBASIC1.21□□□□□ -2.22
CCDC163A0A0D9SF12 SNORA63.4-201ENST00000362763 126 ntBASIC1.2□□□□□ -2.22
CCDC163A0A0D9SF12 SNORD38.2-201ENST00000384470 69 ntBASIC1.2□□□□□ -2.22
CCDC163A0A0D9SF12 BX276092.1-201ENST00000427368 251 ntBASIC1.2□□□□□ -2.22
CCDC163A0A0D9SF12 SPINT5P-201ENST00000448174 155 ntBASIC1.2□□□□□ -2.22
CCDC163A0A0D9SF12 RPS29P1-201ENST00000465274 159 ntBASIC1.2□□□□□ -2.22
CCDC163A0A0D9SF12 AC087343.1-201ENST00000477341 475 ntBASIC1.2□□□□□ -2.22
CCDC163A0A0D9SF12 MIR4295-201ENST00000585286 85 ntBASIC1.2□□□□□ -2.22
CCDC163A0A0D9SF12 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC163A0A0D9SF12 uc_338.28-201ENST00000612082 187 ntBASIC1.2□□□□□ -2.22
CCDC163A0A0D9SF12 MIR6767-201ENST00000637302 66 ntBASIC1.2□□□□□ -2.22
CCDC163A0A0D9SF12 RNU6-1313P-201ENST00000362622 102 ntBASIC1.19□□□□□ -2.22
CCDC163A0A0D9SF12 Y_RNA.323-201ENST00000365157 109 ntBASIC1.19□□□□□ -2.22
CCDC163A0A0D9SF12 MIR598-201ENST00000384868 97 ntBASIC1.19□□□□□ -2.22
CCDC163A0A0D9SF12 MIR577-201ENST00000385196 96 ntBASIC1.19□□□□□ -2.22
CCDC163A0A0D9SF12 SNORD99-201ENST00000408612 74 ntBASIC1.19□□□□□ -2.22
CCDC163A0A0D9SF12 AL353813.1-201ENST00000440700 253 ntBASIC1.19□□□□□ -2.22
CCDC163A0A0D9SF12 AL442128.1-201ENST00000615151 90 ntBASIC1.19□□□□□ -2.22
CCDC163A0A0D9SF12 PVT1_3.1-201ENST00000620853 95 ntBASIC1.19□□□□□ -2.22
CCDC163A0A0D9SF12 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CCDC163A0A0D9SF12 Y_RNA.42-201ENST00000362660 108 ntBASIC1.18□□□□□ -2.22
CCDC163A0A0D9SF12 Y_RNA.163-201ENST00000363702 113 ntBASIC1.18□□□□□ -2.22
CCDC163A0A0D9SF12 MIR548J-201ENST00000408833 112 ntBASIC1.18□□□□□ -2.22
CCDC163A0A0D9SF12 AC011195.1-201ENST00000578177 177 ntBASIC1.18□□□□□ -2.22
CCDC163A0A0D9SF12 AC096720.1-201ENST00000604441 183 ntBASIC1.18□□□□□ -2.22
CCDC163A0A0D9SF12 Y_RNA.247-201ENST00000364500 92 ntBASIC1.17□□□□□ -2.22
CCDC163A0A0D9SF12 RNU6-1201P-201ENST00000384227 107 ntBASIC1.17□□□□□ -2.22
CCDC163A0A0D9SF12 Y_RNA.659-201ENST00000515994 113 ntBASIC1.17□□□□□ -2.22
CCDC163A0A0D9SF12 MIR4694-201ENST00000578534 80 ntBASIC1.17□□□□□ -2.22
CCDC163A0A0D9SF12 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CCDC163A0A0D9SF12 RNY3P2-201ENST00000362918 102 ntBASIC1.16□□□□□ -2.22
CCDC163A0A0D9SF12 SNORD114-27-201ENST00000363766 70 ntBASIC1.16□□□□□ -2.22
CCDC163A0A0D9SF12 RNU4-36P-201ENST00000364294 144 ntBASIC1.16□□□□□ -2.22
CCDC163A0A0D9SF12 SNORA51.5-201ENST00000384126 131 ntBASIC1.16□□□□□ -2.22
CCDC163A0A0D9SF12 RNU6-106P-201ENST00000384405 107 ntBASIC1.16□□□□□ -2.22
CCDC163A0A0D9SF12 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.16□□□□□ -2.22
CCDC163A0A0D9SF12 RNU6-448P-201ENST00000517052 107 ntBASIC1.16□□□□□ -2.22
CCDC163A0A0D9SF12 RNU6-90P-201ENST00000606352 106 ntBASIC1.16□□□□□ -2.22
CCDC163A0A0D9SF12 RNU6-832P-201ENST00000363319 107 ntBASIC1.15□□□□□ -2.23
CCDC163A0A0D9SF12 SNORD38.1-201ENST00000363863 68 ntBASIC1.15□□□□□ -2.23
CCDC163A0A0D9SF12 RNA5SP117-201ENST00000365294 118 ntBASIC1.15□□□□□ -2.23
CCDC163A0A0D9SF12 RNU6-535P-201ENST00000384722 107 ntBASIC1.15□□□□□ -2.23
CCDC163A0A0D9SF12 RNU6-554P-201ENST00000410466 106 ntBASIC1.15□□□□□ -2.23
CCDC163A0A0D9SF12 SNORA19.1-201ENST00000410656 129 ntBASIC1.15□□□□□ -2.23
CCDC163A0A0D9SF12 RNU6-765P-201ENST00000516916 99 ntBASIC1.15□□□□□ -2.23
CCDC163A0A0D9SF12 Y_RNA.36-201ENST00000362602 112 ntBASIC1.14□□□□□ -2.23
CCDC163A0A0D9SF12 RNU6-1099P-201ENST00000363533 107 ntBASIC1.14□□□□□ -2.23
CCDC163A0A0D9SF12 ACA64.5-201ENST00000516207 127 ntBASIC1.14□□□□□ -2.23
CCDC163A0A0D9SF12 AC068338.1-201ENST00000565567 176 ntBASIC1.14□□□□□ -2.23
CCDC163A0A0D9SF12 MIR450A1-201ENST00000362262 91 ntBASIC1.13□□□□□ -2.23
CCDC163A0A0D9SF12 RNU6-756P-201ENST00000383997 107 ntBASIC1.13□□□□□ -2.23
CCDC163A0A0D9SF12 AL031737.1-201ENST00000450125 223 ntBASIC1.13□□□□□ -2.23
CCDC163A0A0D9SF12 MIR6779-201ENST00000617283 64 ntBASIC1.13□□□□□ -2.23
CCDC163A0A0D9SF12 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CCDC163A0A0D9SF12 Y_RNA.536-201ENST00000384621 113 ntBASIC1.12□□□□□ -2.23
CCDC163A0A0D9SF12 MIR548G-201ENST00000408442 89 ntBASIC1.12□□□□□ -2.23
CCDC163A0A0D9SF12 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.12□□□□□ -2.23
CCDC163A0A0D9SF12 RNU6-1113P-201ENST00000384348 107 ntBASIC1.11□□□□□ -2.23
CCDC163A0A0D9SF12 SNORD100-201ENST00000408573 76 ntBASIC1.11□□□□□ -2.23
CCDC163A0A0D9SF12 RNA5SP222-201ENST00000411039 105 ntBASIC1.11□□□□□ -2.23
CCDC163A0A0D9SF12 AC004941.2-201ENST00000427009 228 ntBASIC1.11□□□□□ -2.23
CCDC163A0A0D9SF12 RNU6-1006P-201ENST00000516998 103 ntBASIC1.11□□□□□ -2.23
CCDC163A0A0D9SF12 MIR3613-201ENST00000579844 87 ntBASIC1.11□□□□□ -2.23
CCDC163A0A0D9SF12 Y_RNA.10-201ENST00000362371 110 ntBASIC1.1□□□□□ -2.23
CCDC163A0A0D9SF12 RNU6-291P-201ENST00000384720 107 ntBASIC1.1□□□□□ -2.23
CCDC163A0A0D9SF12 MIR635-201ENST00000384830 98 ntBASIC1.1□□□□□ -2.23
CCDC163A0A0D9SF12 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.1□□□□□ -2.23
CCDC163A0A0D9SF12 MIR3612-201ENST00000579753 87 ntBASIC1.1□□□□□ -2.23
CCDC163A0A0D9SF12 MIR6857-201ENST00000613267 93 ntBASIC1.1□□□□□ -2.23
CCDC163A0A0D9SF12 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CCDC163A0A0D9SF12 MIR573-201ENST00000384964 99 ntBASIC1.09□□□□□ -2.23
CCDC163A0A0D9SF12 MIR590-201ENST00000385008 97 ntBASIC1.09□□□□□ -2.23
CCDC163A0A0D9SF12 AC002350.1-201ENST00000490759 375 ntBASIC1.09□□□□□ -2.23
CCDC163A0A0D9SF12 RNU6-850P-201ENST00000516934 103 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms