Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.78□□□□□ -2.28
COL4A3BPQ9Y5P4 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.78□□□□□ -2.28
COL4A3BPQ9Y5P4 RNY1P2-201ENST00000364820 117 ntBASIC0.77□□□□□ -2.29
COL4A3BPQ9Y5P4 Y_RNA.294-201ENST00000364916 102 ntBASIC0.77□□□□□ -2.29
COL4A3BPQ9Y5P4 RNU6-945P-201ENST00000383947 107 ntBASIC0.77□□□□□ -2.29
COL4A3BPQ9Y5P4 Y_RNA.506-201ENST00000384494 102 ntBASIC0.77□□□□□ -2.29
COL4A3BPQ9Y5P4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
COL4A3BPQ9Y5P4 RNU4-54P-201ENST00000516428 129 ntBASIC0.77□□□□□ -2.29
COL4A3BPQ9Y5P4 AC105081.1-201ENST00000617727 106 ntBASIC0.77□□□□□ -2.29
COL4A3BPQ9Y5P4 MIR6515-201ENST00000619843 57 ntBASIC0.77□□□□□ -2.29
COL4A3BPQ9Y5P4 MIR101-2-201ENST00000362195 79 ntBASIC0.76□□□□□ -2.29
COL4A3BPQ9Y5P4 Y_RNA.198-201ENST00000364013 98 ntBASIC0.76□□□□□ -2.29
COL4A3BPQ9Y5P4 RNY1P8-201ENST00000383970 114 ntBASIC0.76□□□□□ -2.29
COL4A3BPQ9Y5P4 RNU6-535P-201ENST00000384722 107 ntBASIC0.76□□□□□ -2.29
COL4A3BPQ9Y5P4 RNU6-1104P-201ENST00000384723 104 ntBASIC0.76□□□□□ -2.29
COL4A3BPQ9Y5P4 MIR1270-201ENST00000459320 83 ntBASIC0.76□□□□□ -2.29
COL4A3BPQ9Y5P4 RNA5SP272-201ENST00000516095 111 ntBASIC0.76□□□□□ -2.29
COL4A3BPQ9Y5P4 RN7SKP12-201ENST00000516275 143 ntBASIC0.76□□□□□ -2.29
COL4A3BPQ9Y5P4 RNU6-531P-201ENST00000516694 104 ntBASIC0.76□□□□□ -2.29
COL4A3BPQ9Y5P4 IGKV1-22-201ENST00000524313 326 ntBASIC0.76□□□□□ -2.29
COL4A3BPQ9Y5P4 AC138749.4-201ENST00000563970 127 ntBASIC0.76□□□□□ -2.29
COL4A3BPQ9Y5P4 MIR539-201ENST00000365690 78 ntBASIC0.75□□□□□ -2.29
COL4A3BPQ9Y5P4 MIR206-201ENST00000384872 86 ntBASIC0.75□□□□□ -2.29
COL4A3BPQ9Y5P4 MIR1263-201ENST00000408324 86 ntBASIC0.75□□□□□ -2.29
COL4A3BPQ9Y5P4 MTND4LP9-201ENST00000427694 174 ntBASIC0.75□□□□□ -2.29
COL4A3BPQ9Y5P4 RNU7-6P-201ENST00000516845 62 ntBASIC0.75□□□□□ -2.29
COL4A3BPQ9Y5P4 MIR3678-201ENST00000578455 94 ntBASIC0.75□□□□□ -2.29
COL4A3BPQ9Y5P4 AC092634.7-201ENST00000621022 103 ntBASIC0.75□□□□□ -2.29
COL4A3BPQ9Y5P4 Y_RNA.98-201ENST00000363109 102 ntBASIC0.74□□□□□ -2.29
COL4A3BPQ9Y5P4 Y_RNA.119-201ENST00000363301 96 ntBASIC0.74□□□□□ -2.29
COL4A3BPQ9Y5P4 MIRLET7F2-201ENST00000385277 83 ntBASIC0.74□□□□□ -2.29
COL4A3BPQ9Y5P4 RNU6-679P-201ENST00000391003 106 ntBASIC0.74□□□□□ -2.29
COL4A3BPQ9Y5P4 RNU7-48P-201ENST00000458875 63 ntBASIC0.74□□□□□ -2.29
COL4A3BPQ9Y5P4 RNA5SP436-201ENST00000516020 115 ntBASIC0.74□□□□□ -2.29
COL4A3BPQ9Y5P4 RNU7-2P-201ENST00000516096 62 ntBASIC0.74□□□□□ -2.29
COL4A3BPQ9Y5P4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
COL4A3BPQ9Y5P4 Y_RNA.448-201ENST00000384185 108 ntBASIC0.73□□□□□ -2.29
COL4A3BPQ9Y5P4 RNU6-291P-201ENST00000384720 107 ntBASIC0.73□□□□□ -2.29
COL4A3BPQ9Y5P4 RNU6-346P-201ENST00000516288 111 ntBASIC0.73□□□□□ -2.29
COL4A3BPQ9Y5P4 RNU6-865P-201ENST00000364772 107 ntBASIC0.72□□□□□ -2.29
COL4A3BPQ9Y5P4 RNU6-429P-201ENST00000384582 108 ntBASIC0.72□□□□□ -2.29
COL4A3BPQ9Y5P4 RNU6-1321P-201ENST00000390905 107 ntBASIC0.72□□□□□ -2.29
COL4A3BPQ9Y5P4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
COL4A3BPQ9Y5P4 RNU6-733P-201ENST00000410759 104 ntBASIC0.72□□□□□ -2.29
COL4A3BPQ9Y5P4 RNA5SP94-201ENST00000516917 108 ntBASIC0.72□□□□□ -2.29
COL4A3BPQ9Y5P4 MTND5P34-201ENST00000568888 325 ntBASIC0.72□□□□□ -2.29
COL4A3BPQ9Y5P4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.72□□□□□ -2.29
COL4A3BPQ9Y5P4 Y_RNA.32-201ENST00000362589 110 ntBASIC0.71□□□□□ -2.3
COL4A3BPQ9Y5P4 RNU6-616P-201ENST00000384353 107 ntBASIC0.71□□□□□ -2.3
COL4A3BPQ9Y5P4 Y_RNA.528-201ENST00000384575 108 ntBASIC0.71□□□□□ -2.3
COL4A3BPQ9Y5P4 RNU6-257P-201ENST00000410238 98 ntBASIC0.71□□□□□ -2.3
COL4A3BPQ9Y5P4 SNORD71-201ENST00000411292 86 ntBASIC0.71□□□□□ -2.3
COL4A3BPQ9Y5P4 SNORA31.14-201ENST00000516728 116 ntBASIC0.71□□□□□ -2.3
COL4A3BPQ9Y5P4 RNU7-10P-201ENST00000607194 63 ntBASIC0.71□□□□□ -2.3
COL4A3BPQ9Y5P4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.71□□□□□ -2.3
COL4A3BPQ9Y5P4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
COL4A3BPQ9Y5P4 SNORD115-19-201ENST00000363098 82 ntBASIC0.7□□□□□ -2.3
COL4A3BPQ9Y5P4 SNORD115-18-201ENST00000363293 82 ntBASIC0.7□□□□□ -2.3
COL4A3BPQ9Y5P4 RNU6-1229P-201ENST00000364295 107 ntBASIC0.7□□□□□ -2.3
COL4A3BPQ9Y5P4 SNORD115-17-201ENST00000364612 82 ntBASIC0.7□□□□□ -2.3
COL4A3BPQ9Y5P4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.7□□□□□ -2.3
COL4A3BPQ9Y5P4 RNU6-1061P-201ENST00000516530 99 ntBASIC0.7□□□□□ -2.3
COL4A3BPQ9Y5P4 Y_RNA.703-201ENST00000516846 111 ntBASIC0.7□□□□□ -2.3
COL4A3BPQ9Y5P4 AP001362.1-201ENST00000625165 124 ntBASIC0.7□□□□□ -2.3
COL4A3BPQ9Y5P4 Y_RNA.56-201ENST00000362798 112 ntBASIC0.69□□□□□ -2.3
COL4A3BPQ9Y5P4 SNORD115-35-201ENST00000365122 82 ntBASIC0.69□□□□□ -2.3
COL4A3BPQ9Y5P4 RNU6-1062P-201ENST00000383908 107 ntBASIC0.69□□□□□ -2.3
COL4A3BPQ9Y5P4 Y_RNA.567-201ENST00000384736 106 ntBASIC0.69□□□□□ -2.3
COL4A3BPQ9Y5P4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.69□□□□□ -2.3
COL4A3BPQ9Y5P4 MIR548H5-201ENST00000580314 60 ntBASIC0.69□□□□□ -2.3
COL4A3BPQ9Y5P4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
COL4A3BPQ9Y5P4 RNU6-235P-201ENST00000362644 107 ntBASIC0.68□□□□□ -2.3
COL4A3BPQ9Y5P4 MIR598-201ENST00000384868 97 ntBASIC0.68□□□□□ -2.3
COL4A3BPQ9Y5P4 MIR644A-201ENST00000385262 94 ntBASIC0.68□□□□□ -2.3
COL4A3BPQ9Y5P4 AC025166.1-201ENST00000612411 163 ntBASIC0.68□□□□□ -2.3
COL4A3BPQ9Y5P4 AC087741.2-201ENST00000619415 172 ntBASIC0.68□□□□□ -2.3
COL4A3BPQ9Y5P4 Y_RNA.328-201ENST00000365208 113 ntBASIC0.67□□□□□ -2.3
COL4A3BPQ9Y5P4 RNU6-781P-201ENST00000516377 101 ntBASIC0.67□□□□□ -2.3
COL4A3BPQ9Y5P4 PVT1_3.1-201ENST00000620853 95 ntBASIC0.67□□□□□ -2.3
COL4A3BPQ9Y5P4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
COL4A3BPQ9Y5P4 SNORD18A-201ENST00000363753 72 ntBASIC0.66□□□□□ -2.3
COL4A3BPQ9Y5P4 SNORD58C-201ENST00000365223 64 ntBASIC0.66□□□□□ -2.3
COL4A3BPQ9Y5P4 MT-TR-201ENST00000387439 65 ntBASIC0.66□□□□□ -2.3
COL4A3BPQ9Y5P4 SNORA40.8-201ENST00000411034 126 ntBASIC0.66□□□□□ -2.3
COL4A3BPQ9Y5P4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.66□□□□□ -2.3
COL4A3BPQ9Y5P4 MIR6513-201ENST00000621188 64 ntBASIC0.66□□□□□ -2.3
COL4A3BPQ9Y5P4 RNA5SP517-201ENST00000364724 117 ntBASIC0.65□□□□□ -2.31
COL4A3BPQ9Y5P4 Y_RNA.346-201ENST00000365385 112 ntBASIC0.65□□□□□ -2.31
COL4A3BPQ9Y5P4 RNU6-1211P-201ENST00000459179 105 ntBASIC0.65□□□□□ -2.31
COL4A3BPQ9Y5P4 MIR4639-201ENST00000584938 69 ntBASIC0.65□□□□□ -2.31
COL4A3BPQ9Y5P4 Y_RNA.127-201ENST00000363386 109 ntBASIC0.64□□□□□ -2.31
COL4A3BPQ9Y5P4 RNY4P6-201ENST00000363667 96 ntBASIC0.64□□□□□ -2.31
COL4A3BPQ9Y5P4 SNORD50.2-201ENST00000365465 70 ntBASIC0.64□□□□□ -2.31
COL4A3BPQ9Y5P4 RNU6-746P-201ENST00000384112 109 ntBASIC0.64□□□□□ -2.31
COL4A3BPQ9Y5P4 MIR548D2-201ENST00000384955 97 ntBASIC0.64□□□□□ -2.31
COL4A3BPQ9Y5P4 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
COL4A3BPQ9Y5P4 MT-TI-201ENST00000387365 69 ntBASIC0.64□□□□□ -2.31
COL4A3BPQ9Y5P4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.64□□□□□ -2.31
COL4A3BPQ9Y5P4 AC138869.1-201ENST00000568623 124 ntBASIC0.64□□□□□ -2.31
COL4A3BPQ9Y5P4 MIR4500-201ENST00000579472 76 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 220.6 ms