Protein–RNA interactions for Protein: Q9Y5I3

PCDHA1, Protocadherin alpha-1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1Q9Y5I3 AC015818.7-201ENST00000428754 109 ntBASIC1.08□□□□□ -2.24
PCDHA1Q9Y5I3 AC087499.7-201ENST00000441958 109 ntBASIC1.08□□□□□ -2.24
PCDHA1Q9Y5I3 MIR4491-201ENST00000581087 68 ntBASIC1.08□□□□□ -2.24
PCDHA1Q9Y5I3 SNORD92-201ENST00000585078 85 ntBASIC1.08□□□□□ -2.24
PCDHA1Q9Y5I3 RNU6-363P-201ENST00000362895 105 ntBASIC1.07□□□□□ -2.24
PCDHA1Q9Y5I3 MIR548A1-201ENST00000385041 97 ntBASIC1.07□□□□□ -2.24
PCDHA1Q9Y5I3 RNU6-1064P-201ENST00000410626 104 ntBASIC1.07□□□□□ -2.24
PCDHA1Q9Y5I3 PDCD5P2-201ENST00000507570 312 ntBASIC1.07□□□□□ -2.24
PCDHA1Q9Y5I3 RNU7-156P-201ENST00000517214 74 ntBASIC1.07□□□□□ -2.24
PCDHA1Q9Y5I3 AC133485.1-201ENST00000567176 124 ntBASIC1.07□□□□□ -2.24
PCDHA1Q9Y5I3 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
PCDHA1Q9Y5I3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.07□□□□□ -2.24
PCDHA1Q9Y5I3 RMST_2.1-201ENST00000617263 136 ntBASIC1.07□□□□□ -2.24
PCDHA1Q9Y5I3 Y_RNA.273-201ENST00000364703 102 ntBASIC1.06□□□□□ -2.24
PCDHA1Q9Y5I3 RNY1P2-201ENST00000364820 117 ntBASIC1.06□□□□□ -2.24
PCDHA1Q9Y5I3 RNU6-476P-201ENST00000384726 107 ntBASIC1.06□□□□□ -2.24
PCDHA1Q9Y5I3 RNU6-1321P-201ENST00000390905 107 ntBASIC1.06□□□□□ -2.24
PCDHA1Q9Y5I3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.06□□□□□ -2.24
PCDHA1Q9Y5I3 RNU4-83P-201ENST00000410863 133 ntBASIC1.06□□□□□ -2.24
PCDHA1Q9Y5I3 snoU13.18-201ENST00000459483 104 ntBASIC1.06□□□□□ -2.24
PCDHA1Q9Y5I3 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
PCDHA1Q9Y5I3 MIR3973-201ENST00000579824 107 ntBASIC1.06□□□□□ -2.24
PCDHA1Q9Y5I3 MIR548AI-201ENST00000579940 88 ntBASIC1.06□□□□□ -2.24
PCDHA1Q9Y5I3 MIR6857-201ENST00000613267 93 ntBASIC1.06□□□□□ -2.24
PCDHA1Q9Y5I3 AC105081.1-201ENST00000617727 106 ntBASIC1.06□□□□□ -2.24
PCDHA1Q9Y5I3 MIR6734-201ENST00000621166 68 ntBASIC1.06□□□□□ -2.24
PCDHA1Q9Y5I3 MIR1255B1-201ENST00000636325 63 ntBASIC1.06□□□□□ -2.24
PCDHA1Q9Y5I3 Y_RNA.85-201ENST00000363014 111 ntBASIC1.05□□□□□ -2.24
PCDHA1Q9Y5I3 Y_RNA.98-201ENST00000363109 102 ntBASIC1.05□□□□□ -2.24
PCDHA1Q9Y5I3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
PCDHA1Q9Y5I3 RNU6-1056P-201ENST00000383996 107 ntBASIC1.05□□□□□ -2.24
PCDHA1Q9Y5I3 SNORD105-201ENST00000386910 85 ntBASIC1.05□□□□□ -2.24
PCDHA1Q9Y5I3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
PCDHA1Q9Y5I3 AC211469.2-201ENST00000605461 205 ntBASIC1.05□□□□□ -2.24
PCDHA1Q9Y5I3 MIR8066-201ENST00000617280 78 ntBASIC1.05□□□□□ -2.24
PCDHA1Q9Y5I3 MIR6788-201ENST00000618842 66 ntBASIC1.05□□□□□ -2.24
PCDHA1Q9Y5I3 AL162726.3-218ENST00000636401 95 ntBASIC1.05□□□□□ -2.24
PCDHA1Q9Y5I3 RNU4-67P-201ENST00000364569 141 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 Y_RNA.281-201ENST00000364774 94 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 Y_RNA.291-201ENST00000364886 113 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 Y_RNA.448-201ENST00000384185 108 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 RNU6-364P-201ENST00000384387 107 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 SNORD116-21-201ENST00000384507 92 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 RNU6-880P-201ENST00000384526 107 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 MIR520F-201ENST00000384824 87 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 MIR548J-201ENST00000408833 112 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 MIR1912-201ENST00000410389 80 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 RNU7-48P-201ENST00000458875 63 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 UBL5P1-201ENST00000507979 193 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 RNU6-521P-201ENST00000516663 105 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 RNU6-765P-201ENST00000516916 99 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 AC138749.4-201ENST00000563970 127 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 MTND5P34-201ENST00000568888 325 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 MIR6082-201ENST00000613604 109 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 MIR7111-201ENST00000619751 72 ntBASIC1.04□□□□□ -2.24
PCDHA1Q9Y5I3 Y_RNA.42-201ENST00000362660 108 ntBASIC1.03□□□□□ -2.24
PCDHA1Q9Y5I3 RNU6-403P-201ENST00000363163 104 ntBASIC1.03□□□□□ -2.24
PCDHA1Q9Y5I3 Y_RNA.309-201ENST00000365046 111 ntBASIC1.03□□□□□ -2.24
PCDHA1Q9Y5I3 Y_RNA.328-201ENST00000365208 113 ntBASIC1.03□□□□□ -2.24
PCDHA1Q9Y5I3 Y_RNA.507-201ENST00000384500 99 ntBASIC1.03□□□□□ -2.24
PCDHA1Q9Y5I3 RNU1-119P-201ENST00000391122 165 ntBASIC1.03□□□□□ -2.24
PCDHA1Q9Y5I3 Y_RNA.629-201ENST00000411368 105 ntBASIC1.03□□□□□ -2.24
PCDHA1Q9Y5I3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.03□□□□□ -2.24
PCDHA1Q9Y5I3 RNU6-1194P-201ENST00000516208 104 ntBASIC1.03□□□□□ -2.24
PCDHA1Q9Y5I3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.03□□□□□ -2.24
PCDHA1Q9Y5I3 AL035470.1-201ENST00000622571 220 ntBASIC1.03□□□□□ -2.24
PCDHA1Q9Y5I3 RNA5SP133-201ENST00000363368 119 ntBASIC1.02□□□□□ -2.25
PCDHA1Q9Y5I3 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
PCDHA1Q9Y5I3 Y_RNA.549-201ENST00000384657 102 ntBASIC1.02□□□□□ -2.25
PCDHA1Q9Y5I3 RNU6-1307P-201ENST00000391012 103 ntBASIC1.02□□□□□ -2.25
PCDHA1Q9Y5I3 RNU7-102P-201ENST00000458948 62 ntBASIC1.02□□□□□ -2.25
PCDHA1Q9Y5I3 RNU6-1018P-201ENST00000516577 106 ntBASIC1.02□□□□□ -2.25
PCDHA1Q9Y5I3 MIR4698-201ENST00000577795 80 ntBASIC1.02□□□□□ -2.25
PCDHA1Q9Y5I3 MIR151B-201ENST00000584249 96 ntBASIC1.02□□□□□ -2.25
PCDHA1Q9Y5I3 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
PCDHA1Q9Y5I3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.02□□□□□ -2.25
PCDHA1Q9Y5I3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
PCDHA1Q9Y5I3 Y_RNA.13-201ENST00000362403 112 ntBASIC1.01□□□□□ -2.25
PCDHA1Q9Y5I3 RNU6-865P-201ENST00000364772 107 ntBASIC1.01□□□□□ -2.25
PCDHA1Q9Y5I3 RNU6-1335P-201ENST00000365426 107 ntBASIC1.01□□□□□ -2.25
PCDHA1Q9Y5I3 RNU6-409P-201ENST00000384114 104 ntBASIC1.01□□□□□ -2.25
PCDHA1Q9Y5I3 RNU6-816P-201ENST00000390914 107 ntBASIC1.01□□□□□ -2.25
PCDHA1Q9Y5I3 RNU6-1268P-201ENST00000391214 107 ntBASIC1.01□□□□□ -2.25
PCDHA1Q9Y5I3 RNU6-1239P-201ENST00000391310 107 ntBASIC1.01□□□□□ -2.25
PCDHA1Q9Y5I3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.01□□□□□ -2.25
PCDHA1Q9Y5I3 RNU6-412P-201ENST00000516434 106 ntBASIC1.01□□□□□ -2.25
PCDHA1Q9Y5I3 AP001362.1-201ENST00000625165 124 ntBASIC1.01□□□□□ -2.25
PCDHA1Q9Y5I3 U6.109-201ENST00000636749 87 ntBASIC1.01□□□□□ -2.25
PCDHA1Q9Y5I3 Y_RNA.35-201ENST00000362601 101 ntBASIC1□□□□□ -2.25
PCDHA1Q9Y5I3 Y_RNA.119-201ENST00000363301 96 ntBASIC1□□□□□ -2.25
PCDHA1Q9Y5I3 MIR520H-201ENST00000385126 88 ntBASIC1□□□□□ -2.25
PCDHA1Q9Y5I3 SNORA25.16-201ENST00000516741 121 ntBASIC1□□□□□ -2.25
PCDHA1Q9Y5I3 RNU6-1223P-201ENST00000517124 104 ntBASIC1□□□□□ -2.25
PCDHA1Q9Y5I3 AC068339.1-201ENST00000526965 141 ntBASIC1□□□□□ -2.25
PCDHA1Q9Y5I3 AC090897.1-201ENST00000580909 226 ntBASIC1□□□□□ -2.25
PCDHA1Q9Y5I3 AC008608.1-201ENST00000603910 127 ntBASIC1□□□□□ -2.25
PCDHA1Q9Y5I3 Y_RNA.49-201ENST00000362714 112 ntBASIC0.99□□□□□ -2.25
PCDHA1Q9Y5I3 RNU4-58P-201ENST00000363192 141 ntBASIC0.99□□□□□ -2.25
PCDHA1Q9Y5I3 SNORA63.5-201ENST00000363548 123 ntBASIC0.99□□□□□ -2.25
PCDHA1Q9Y5I3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms