Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHGA4Q9Y5G9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHGA4Q9Y5G9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHGA4Q9Y5G9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDHGA4Q9Y5G9 MIR5194-201ENST00000582634 120 ntBASIC2.92□□□□□ -1.94
PCDHGA4Q9Y5G9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDHGA4Q9Y5G9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHGA4Q9Y5G9 MIR22-201ENST00000362190 85 ntBASIC2.91□□□□□ -1.94
PCDHGA4Q9Y5G9 AC244098.3-201ENST00000424803 96 ntBASIC2.91□□□□□ -1.94
PCDHGA4Q9Y5G9 RN7SL20P-201ENST00000488827 297 ntBASIC2.91□□□□□ -1.94
PCDHGA4Q9Y5G9 MIR3945-201ENST00000581853 98 ntBASIC2.91□□□□□ -1.94
PCDHGA4Q9Y5G9 SNRPGP19-201ENST00000603826 189 ntBASIC2.91□□□□□ -1.94
PCDHGA4Q9Y5G9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.9□□□□□ -1.95
PCDHGA4Q9Y5G9 RNU6-580P-201ENST00000365159 107 ntBASIC2.9□□□□□ -1.95
PCDHGA4Q9Y5G9 AL161935.2-201ENST00000414627 60 ntBASIC2.9□□□□□ -1.95
PCDHGA4Q9Y5G9 AC104984.5-201ENST00000586878 94 ntBASIC2.9□□□□□ -1.95
PCDHGA4Q9Y5G9 MIR6082-201ENST00000613604 109 ntBASIC2.9□□□□□ -1.95
PCDHGA4Q9Y5G9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
PCDHGA4Q9Y5G9 MIR599-201ENST00000385069 95 ntBASIC2.89□□□□□ -1.95
PCDHGA4Q9Y5G9 RNA5SP274-201ENST00000410484 108 ntBASIC2.89□□□□□ -1.95
PCDHGA4Q9Y5G9 RNA5SP270-201ENST00000411361 118 ntBASIC2.89□□□□□ -1.95
PCDHGA4Q9Y5G9 RNA5SP82-201ENST00000516707 92 ntBASIC2.89□□□□□ -1.95
PCDHGA4Q9Y5G9 RNU6-1057P-201ENST00000517162 102 ntBASIC2.89□□□□□ -1.95
PCDHGA4Q9Y5G9 GHRLOS.1-201ENST00000610995 70 ntBASIC2.89□□□□□ -1.95
PCDHGA4Q9Y5G9 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.89□□□□□ -1.95
PCDHGA4Q9Y5G9 MIR6715A-201ENST00000615929 79 ntBASIC2.89□□□□□ -1.95
PCDHGA4Q9Y5G9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PCDHGA4Q9Y5G9 Y_RNA.13-201ENST00000362403 112 ntBASIC2.88□□□□□ -1.95
PCDHGA4Q9Y5G9 RNU6-382P-201ENST00000365181 106 ntBASIC2.88□□□□□ -1.95
PCDHGA4Q9Y5G9 U3.27-201ENST00000391237 200 ntBASIC2.88□□□□□ -1.95
PCDHGA4Q9Y5G9 snoU13.25-201ENST00000458945 104 ntBASIC2.88□□□□□ -1.95
PCDHGA4Q9Y5G9 AP003716.2-201ENST00000528260 108 ntBASIC2.88□□□□□ -1.95
PCDHGA4Q9Y5G9 MIR4319-201ENST00000577285 85 ntBASIC2.88□□□□□ -1.95
PCDHGA4Q9Y5G9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.88□□□□□ -1.95
PCDHGA4Q9Y5G9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
PCDHGA4Q9Y5G9 AC023934.1-201ENST00000574529 2389 ntBASIC2.87□□□□□ -1.95
PCDHGA4Q9Y5G9 SNORA16B-201ENST00000364674 135 ntBASIC2.87□□□□□ -1.95
PCDHGA4Q9Y5G9 MTND4LP1-201ENST00000446263 157 ntBASIC2.87□□□□□ -1.95
PCDHGA4Q9Y5G9 RNU7-185P-201ENST00000459215 60 ntBASIC2.87□□□□□ -1.95
PCDHGA4Q9Y5G9 AL133373.1-201ENST00000497098 94 ntBASIC2.87□□□□□ -1.95
PCDHGA4Q9Y5G9 RNU6-1265P-201ENST00000516342 103 ntBASIC2.87□□□□□ -1.95
PCDHGA4Q9Y5G9 AC138907.6-201ENST00000568401 126 ntBASIC2.87□□□□□ -1.95
PCDHGA4Q9Y5G9 AC138869.1-201ENST00000568623 124 ntBASIC2.87□□□□□ -1.95
PCDHGA4Q9Y5G9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHGA4Q9Y5G9 RNU6-1079P-201ENST00000362861 110 ntBASIC2.86□□□□□ -1.95
PCDHGA4Q9Y5G9 RNU6-668P-201ENST00000364180 107 ntBASIC2.86□□□□□ -1.95
PCDHGA4Q9Y5G9 RNA5SP95-201ENST00000410319 137 ntBASIC2.86□□□□□ -1.95
PCDHGA4Q9Y5G9 RNA5SP184-201ENST00000411071 108 ntBASIC2.86□□□□□ -1.95
PCDHGA4Q9Y5G9 RNA5SP450-201ENST00000411206 102 ntBASIC2.86□□□□□ -1.95
PCDHGA4Q9Y5G9 RNU6-982P-201ENST00000516216 102 ntBASIC2.86□□□□□ -1.95
PCDHGA4Q9Y5G9 RNU6-542P-201ENST00000516405 103 ntBASIC2.86□□□□□ -1.95
PCDHGA4Q9Y5G9 RNU6-765P-201ENST00000516916 99 ntBASIC2.86□□□□□ -1.95
PCDHGA4Q9Y5G9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCDHGA4Q9Y5G9 MIR103A2-201ENST00000362154 78 ntBASIC2.85□□□□□ -1.95
PCDHGA4Q9Y5G9 SNORA67.1-201ENST00000364749 141 ntBASIC2.85□□□□□ -1.95
PCDHGA4Q9Y5G9 MIR1257-201ENST00000408490 117 ntBASIC2.85□□□□□ -1.95
PCDHGA4Q9Y5G9 MIR1185-1-201ENST00000408598 86 ntBASIC2.85□□□□□ -1.95
PCDHGA4Q9Y5G9 RN7SL633P-201ENST00000488974 297 ntBASIC2.85□□□□□ -1.95
PCDHGA4Q9Y5G9 RNU6-947P-201ENST00000516264 106 ntBASIC2.85□□□□□ -1.95
PCDHGA4Q9Y5G9 MIR4435-1-201ENST00000582552 80 ntBASIC2.85□□□□□ -1.95
PCDHGA4Q9Y5G9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.85□□□□□ -1.95
PCDHGA4Q9Y5G9 AC092634.7-201ENST00000621022 103 ntBASIC2.85□□□□□ -1.95
PCDHGA4Q9Y5G9 AC062016.1-201ENST00000355719 319 ntBASIC2.84□□□□□ -1.95
PCDHGA4Q9Y5G9 Y_RNA.258-201ENST00000364613 105 ntBASIC2.84□□□□□ -1.95
PCDHGA4Q9Y5G9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.84□□□□□ -1.95
PCDHGA4Q9Y5G9 JTBP1-201ENST00000441314 247 ntBASIC2.84□□□□□ -1.95
PCDHGA4Q9Y5G9 RNU6-250P-201ENST00000516958 103 ntBASIC2.84□□□□□ -1.95
PCDHGA4Q9Y5G9 MIR4658-201ENST00000584344 65 ntBASIC2.84□□□□□ -1.95
PCDHGA4Q9Y5G9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHGA4Q9Y5G9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.83□□□□□ -1.96
PCDHGA4Q9Y5G9 Y_RNA.722-201ENST00000517279 114 ntBASIC2.83□□□□□ -1.96
PCDHGA4Q9Y5G9 AL078603.1-201ENST00000603824 313 ntBASIC2.83□□□□□ -1.96
PCDHGA4Q9Y5G9 AL596028.1-201ENST00000326971 197 ntBASIC2.82□□□□□ -1.96
PCDHGA4Q9Y5G9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDHGA4Q9Y5G9 MIR466-201ENST00000580653 84 ntBASIC2.82□□□□□ -1.96
PCDHGA4Q9Y5G9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHGA4Q9Y5G9 RNA5SP432-201ENST00000362480 116 ntBASIC2.81□□□□□ -1.96
PCDHGA4Q9Y5G9 RNA5SP264-201ENST00000363115 107 ntBASIC2.81□□□□□ -1.96
PCDHGA4Q9Y5G9 RNU6-940P-201ENST00000363433 104 ntBASIC2.81□□□□□ -1.96
PCDHGA4Q9Y5G9 SNORA25.5-201ENST00000363782 126 ntBASIC2.81□□□□□ -1.96
PCDHGA4Q9Y5G9 SNORA9.2-201ENST00000365361 133 ntBASIC2.81□□□□□ -1.96
PCDHGA4Q9Y5G9 Y_RNA.375-201ENST00000365625 101 ntBASIC2.81□□□□□ -1.96
PCDHGA4Q9Y5G9 AC108938.1-201ENST00000451204 136 ntBASIC2.81□□□□□ -1.96
PCDHGA4Q9Y5G9 SNORA31.11-201ENST00000516528 139 ntBASIC2.81□□□□□ -1.96
PCDHGA4Q9Y5G9 AC107016.2-201ENST00000547968 190 ntBASIC2.81□□□□□ -1.96
PCDHGA4Q9Y5G9 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.81□□□□□ -1.96
PCDHGA4Q9Y5G9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
PCDHGA4Q9Y5G9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
PCDHGA4Q9Y5G9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHGA4Q9Y5G9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHGA4Q9Y5G9 RNU6-851P-201ENST00000384565 107 ntBASIC2.8□□□□□ -1.96
PCDHGA4Q9Y5G9 RPS29P6-201ENST00000438196 145 ntBASIC2.8□□□□□ -1.96
PCDHGA4Q9Y5G9 AC015688.6-201ENST00000577737 104 ntBASIC2.8□□□□□ -1.96
PCDHGA4Q9Y5G9 MIR3920-201ENST00000581751 86 ntBASIC2.8□□□□□ -1.96
PCDHGA4Q9Y5G9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHGA4Q9Y5G9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
PCDHGA4Q9Y5G9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHGA4Q9Y5G9 ZNF658B-202ENST00000615961 3375 ntBASIC2.8□□□□□ -1.96
PCDHGA4Q9Y5G9 RNU6-808P-201ENST00000391233 108 ntBASIC2.79□□□□□ -1.96
PCDHGA4Q9Y5G9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms