Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 U6.70-201ENST00000620287 104 ntBASIC1.27□□□□□ -2.21
CDK11AQ9UQ88 MIR3914-2-201ENST00000637339 95 ntBASIC1.27□□□□□ -2.21
CDK11AQ9UQ88 RNU6-369P-201ENST00000362515 102 ntBASIC1.26□□□□□ -2.21
CDK11AQ9UQ88 SNORD105-201ENST00000386910 85 ntBASIC1.26□□□□□ -2.21
CDK11AQ9UQ88 RNU1-119P-201ENST00000391122 165 ntBASIC1.26□□□□□ -2.21
CDK11AQ9UQ88 RNU4-83P-201ENST00000410863 133 ntBASIC1.26□□□□□ -2.21
CDK11AQ9UQ88 AC015818.7-201ENST00000428754 109 ntBASIC1.26□□□□□ -2.21
CDK11AQ9UQ88 AC087499.7-201ENST00000441958 109 ntBASIC1.26□□□□□ -2.21
CDK11AQ9UQ88 RNU6-1333P-201ENST00000516162 93 ntBASIC1.26□□□□□ -2.21
CDK11AQ9UQ88 RNU7-137P-201ENST00000516788 62 ntBASIC1.26□□□□□ -2.21
CDK11AQ9UQ88 RNU7-156P-201ENST00000517214 74 ntBASIC1.26□□□□□ -2.21
CDK11AQ9UQ88 AL589743.1-201ENST00000551932 2712 ntBASIC1.26□□□□□ -2.21
CDK11AQ9UQ88 MIR216A-201ENST00000385063 110 ntBASIC1.24□□□□□ -2.21
CDK11AQ9UQ88 Y_RNA.630-201ENST00000411370 108 ntBASIC1.24□□□□□ -2.21
CDK11AQ9UQ88 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.23□□□□□ -2.21
CDK11AQ9UQ88 SNORD115-19-201ENST00000363098 82 ntBASIC1.23□□□□□ -2.21
CDK11AQ9UQ88 RNU6-403P-201ENST00000363163 104 ntBASIC1.23□□□□□ -2.21
CDK11AQ9UQ88 SNORD115-18-201ENST00000363293 82 ntBASIC1.23□□□□□ -2.21
CDK11AQ9UQ88 SNORD115-17-201ENST00000364612 82 ntBASIC1.23□□□□□ -2.21
CDK11AQ9UQ88 MIR548D2-201ENST00000384955 97 ntBASIC1.23□□□□□ -2.21
CDK11AQ9UQ88 RNU7-56P-201ENST00000458744 62 ntBASIC1.23□□□□□ -2.21
CDK11AQ9UQ88 MIR1270-201ENST00000459320 83 ntBASIC1.23□□□□□ -2.21
CDK11AQ9UQ88 RNU6-351P-201ENST00000516097 100 ntBASIC1.23□□□□□ -2.21
CDK11AQ9UQ88 SNORD92-201ENST00000585078 85 ntBASIC1.23□□□□□ -2.21
CDK11AQ9UQ88 MIR4653-201ENST00000585107 83 ntBASIC1.23□□□□□ -2.21
CDK11AQ9UQ88 AC087741.2-201ENST00000619415 172 ntBASIC1.23□□□□□ -2.21
CDK11AQ9UQ88 MT-TI-201ENST00000387365 69 ntBASIC1.22□□□□□ -2.21
CDK11AQ9UQ88 AC138907.6-201ENST00000568401 126 ntBASIC1.22□□□□□ -2.21
CDK11AQ9UQ88 MIR4491-201ENST00000581087 68 ntBASIC1.22□□□□□ -2.21
CDK11AQ9UQ88 MIR6513-201ENST00000621188 64 ntBASIC1.22□□□□□ -2.21
CDK11AQ9UQ88 SNORD114-2-201ENST00000363953 78 ntBASIC1.21□□□□□ -2.22
CDK11AQ9UQ88 Y_RNA.205-201ENST00000364128 113 ntBASIC1.21□□□□□ -2.22
CDK11AQ9UQ88 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CDK11AQ9UQ88 RNU6-616P-201ENST00000384353 107 ntBASIC1.21□□□□□ -2.22
CDK11AQ9UQ88 Y_RNA.525-201ENST00000384570 113 ntBASIC1.21□□□□□ -2.22
CDK11AQ9UQ88 AL359881.1-201ENST00000602916 267 ntBASIC1.21□□□□□ -2.22
CDK11AQ9UQ88 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.21□□□□□ -2.22
CDK11AQ9UQ88 RNA5SP325-201ENST00000363756 130 ntBASIC1.2□□□□□ -2.22
CDK11AQ9UQ88 RNU6-22P-201ENST00000384355 107 ntBASIC1.2□□□□□ -2.22
CDK11AQ9UQ88 MIR206-201ENST00000384872 86 ntBASIC1.2□□□□□ -2.22
CDK11AQ9UQ88 MIR520H-201ENST00000385126 88 ntBASIC1.2□□□□□ -2.22
CDK11AQ9UQ88 Y_RNA.649-201ENST00000459077 103 ntBASIC1.2□□□□□ -2.22
CDK11AQ9UQ88 RNU7-2P-201ENST00000516096 62 ntBASIC1.2□□□□□ -2.22
CDK11AQ9UQ88 RNU6-406P-201ENST00000516470 107 ntBASIC1.2□□□□□ -2.22
CDK11AQ9UQ88 AL353765.1-201ENST00000605514 183 ntBASIC1.2□□□□□ -2.22
CDK11AQ9UQ88 MIR6835-201ENST00000621552 64 ntBASIC1.2□□□□□ -2.22
CDK11AQ9UQ88 SNORD113-1-201ENST00000365321 69 ntBASIC1.19□□□□□ -2.22
CDK11AQ9UQ88 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CDK11AQ9UQ88 SNORA72.6-201ENST00000384520 129 ntBASIC1.19□□□□□ -2.22
CDK11AQ9UQ88 Y_RNA.563-201ENST00000384707 108 ntBASIC1.19□□□□□ -2.22
CDK11AQ9UQ88 MIR548A3-201ENST00000385297 97 ntBASIC1.19□□□□□ -2.22
CDK11AQ9UQ88 RNU7-102P-201ENST00000458948 62 ntBASIC1.19□□□□□ -2.22
CDK11AQ9UQ88 RNU6-765P-201ENST00000516916 99 ntBASIC1.19□□□□□ -2.22
CDK11AQ9UQ88 DEFB131E-201ENST00000532329 154 ntBASIC1.19□□□□□ -2.22
CDK11AQ9UQ88 AC105081.1-201ENST00000617727 106 ntBASIC1.19□□□□□ -2.22
CDK11AQ9UQ88 Y_RNA.98-201ENST00000363109 102 ntBASIC1.18□□□□□ -2.22
CDK11AQ9UQ88 SNORD115-35-201ENST00000365122 82 ntBASIC1.18□□□□□ -2.22
CDK11AQ9UQ88 RNY1P4-201ENST00000384595 115 ntBASIC1.18□□□□□ -2.22
CDK11AQ9UQ88 Y_RNA.588-201ENST00000391254 102 ntBASIC1.18□□□□□ -2.22
CDK11AQ9UQ88 RNU6-735P-201ENST00000410612 107 ntBASIC1.18□□□□□ -2.22
CDK11AQ9UQ88 RNU6-479P-201ENST00000516348 105 ntBASIC1.18□□□□□ -2.22
CDK11AQ9UQ88 AL670379.3-201ENST00000605040 251 ntBASIC1.18□□□□□ -2.22
CDK11AQ9UQ88 MIR6082-201ENST00000613604 109 ntBASIC1.18□□□□□ -2.22
CDK11AQ9UQ88 RNU4-58P-201ENST00000363192 141 ntBASIC1.17□□□□□ -2.22
CDK11AQ9UQ88 RNA5SP133-201ENST00000363368 119 ntBASIC1.17□□□□□ -2.22
CDK11AQ9UQ88 RNY1P2-201ENST00000364820 117 ntBASIC1.17□□□□□ -2.22
CDK11AQ9UQ88 SNORD99-201ENST00000408612 74 ntBASIC1.17□□□□□ -2.22
CDK11AQ9UQ88 AC096949.1-201ENST00000412047 152 ntBASIC1.17□□□□□ -2.22
CDK11AQ9UQ88 AL606490.4-201ENST00000423117 127 ntBASIC1.17□□□□□ -2.22
CDK11AQ9UQ88 RNU7-48P-201ENST00000458875 63 ntBASIC1.17□□□□□ -2.22
CDK11AQ9UQ88 RNU6-313P-201ENST00000516317 112 ntBASIC1.17□□□□□ -2.22
CDK11AQ9UQ88 AL365222.1-201ENST00000614661 98 ntBASIC1.17□□□□□ -2.22
CDK11AQ9UQ88 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
CDK11AQ9UQ88 RNU6-865P-201ENST00000364772 107 ntBASIC1.16□□□□□ -2.22
CDK11AQ9UQ88 RNU6-1335P-201ENST00000365426 107 ntBASIC1.16□□□□□ -2.22
CDK11AQ9UQ88 Y_RNA.448-201ENST00000384185 108 ntBASIC1.16□□□□□ -2.22
CDK11AQ9UQ88 MIR605-201ENST00000385078 83 ntBASIC1.16□□□□□ -2.22
CDK11AQ9UQ88 RNU6-1168P-201ENST00000390831 104 ntBASIC1.16□□□□□ -2.22
CDK11AQ9UQ88 RNU6-1321P-201ENST00000390905 107 ntBASIC1.16□□□□□ -2.22
CDK11AQ9UQ88 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.16□□□□□ -2.22
CDK11AQ9UQ88 MIR4679-2-201ENST00000578358 77 ntBASIC1.16□□□□□ -2.22
CDK11AQ9UQ88 U6.109-201ENST00000636749 87 ntBASIC1.16□□□□□ -2.22
CDK11AQ9UQ88 MIR6866-201ENST00000638146 69 ntBASIC1.16□□□□□ -2.22
CDK11AQ9UQ88 Y_RNA.13-201ENST00000362403 112 ntBASIC1.15□□□□□ -2.23
CDK11AQ9UQ88 Y_RNA.42-201ENST00000362660 108 ntBASIC1.15□□□□□ -2.23
CDK11AQ9UQ88 Y_RNA.261-201ENST00000364631 102 ntBASIC1.15□□□□□ -2.23
CDK11AQ9UQ88 Y_RNA.507-201ENST00000384500 99 ntBASIC1.15□□□□□ -2.23
CDK11AQ9UQ88 MIR508-201ENST00000384857 115 ntBASIC1.15□□□□□ -2.23
CDK11AQ9UQ88 AL606753.1-201ENST00000427435 87 ntBASIC1.15□□□□□ -2.23
CDK11AQ9UQ88 RNU6-1194P-201ENST00000516208 104 ntBASIC1.15□□□□□ -2.23
CDK11AQ9UQ88 SNORD33.1-201ENST00000516213 88 ntBASIC1.15□□□□□ -2.23
CDK11AQ9UQ88 AC007012.1-201ENST00000567192 175 ntBASIC1.15□□□□□ -2.23
CDK11AQ9UQ88 AC090897.1-201ENST00000580909 226 ntBASIC1.15□□□□□ -2.23
CDK11AQ9UQ88 MIR8066-201ENST00000617280 78 ntBASIC1.15□□□□□ -2.23
CDK11AQ9UQ88 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CDK11AQ9UQ88 RNU6-110P-201ENST00000384508 104 ntBASIC1.14□□□□□ -2.23
CDK11AQ9UQ88 RNU6-1154P-201ENST00000391001 104 ntBASIC1.14□□□□□ -2.23
CDK11AQ9UQ88 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.14□□□□□ -2.23
CDK11AQ9UQ88 RPL39P34-201ENST00000477141 156 ntBASIC1.14□□□□□ -2.23
CDK11AQ9UQ88 RNU6-448P-201ENST00000517052 107 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms