Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RNU6-122P-201ENST00000516818 107 ntBASIC3.29□□□□□ -1.88
TRIM35Q9UPQ4 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM35Q9UPQ4 AC093010.3-201ENST00000570269 15214 ntBASIC3.29□□□□□ -1.88
TRIM35Q9UPQ4 RNU1-148P-201ENST00000384472 162 ntBASIC3.28□□□□□ -1.88
TRIM35Q9UPQ4 RNA5SP385-201ENST00000515947 110 ntBASIC3.28□□□□□ -1.88
TRIM35Q9UPQ4 RNU6-1265P-201ENST00000516342 103 ntBASIC3.28□□□□□ -1.88
TRIM35Q9UPQ4 AC103810.8-201ENST00000607347 118 ntBASIC3.28□□□□□ -1.88
TRIM35Q9UPQ4 AC073869.9-201ENST00000641610 120 ntBASIC3.28□□□□□ -1.88
TRIM35Q9UPQ4 AP006437.1-201ENST00000641440 3685 ntBASIC3.28□□□□□ -1.89
TRIM35Q9UPQ4 RNA5SP456-201ENST00000364002 114 ntBASIC3.27□□□□□ -1.89
TRIM35Q9UPQ4 MIR518A2-201ENST00000384966 87 ntBASIC3.27□□□□□ -1.89
TRIM35Q9UPQ4 RN7SKP123-201ENST00000410732 291 ntBASIC3.27□□□□□ -1.89
TRIM35Q9UPQ4 MIR18B-201ENST00000454574 71 ntBASIC3.27□□□□□ -1.89
TRIM35Q9UPQ4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM35Q9UPQ4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM35Q9UPQ4 MAPK10-266ENST00000641066 6555 ntBASIC3.26□□□□□ -1.89
TRIM35Q9UPQ4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM35Q9UPQ4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM35Q9UPQ4 MIR377-201ENST00000362145 69 ntBASIC3.26□□□□□ -1.89
TRIM35Q9UPQ4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TRIM35Q9UPQ4 SNORD75.2-201ENST00000408784 58 ntBASIC3.26□□□□□ -1.89
TRIM35Q9UPQ4 RNA5SP344-201ENST00000411081 104 ntBASIC3.26□□□□□ -1.89
TRIM35Q9UPQ4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TRIM35Q9UPQ4 Y_RNA.500-201ENST00000384466 111 ntBASIC3.25□□□□□ -1.89
TRIM35Q9UPQ4 MIR599-201ENST00000385069 95 ntBASIC3.25□□□□□ -1.89
TRIM35Q9UPQ4 RNU6-360P-201ENST00000390944 104 ntBASIC3.25□□□□□ -1.89
TRIM35Q9UPQ4 RNA5SP299-201ENST00000391203 116 ntBASIC3.25□□□□□ -1.89
TRIM35Q9UPQ4 RN7SL274P-201ENST00000492268 272 ntBASIC3.25□□□□□ -1.89
TRIM35Q9UPQ4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM35Q9UPQ4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM35Q9UPQ4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
TRIM35Q9UPQ4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM35Q9UPQ4 Y_RNA.379-201ENST00000365653 102 ntBASIC3.24□□□□□ -1.89
TRIM35Q9UPQ4 SNORD41-201ENST00000386967 70 ntBASIC3.24□□□□□ -1.89
TRIM35Q9UPQ4 AC015688.6-201ENST00000577737 104 ntBASIC3.24□□□□□ -1.89
TRIM35Q9UPQ4 MIR5092-201ENST00000583139 88 ntBASIC3.24□□□□□ -1.89
TRIM35Q9UPQ4 RNU6-203P-201ENST00000384038 104 ntBASIC3.23□□□□□ -1.89
TRIM35Q9UPQ4 AL359511.1-201ENST00000402970 211 ntBASIC3.23□□□□□ -1.89
TRIM35Q9UPQ4 AL513328.1-201ENST00000446460 224 ntBASIC3.23□□□□□ -1.89
TRIM35Q9UPQ4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM35Q9UPQ4 RPL23AP94-201ENST00000512518 302 ntBASIC3.23□□□□□ -1.89
TRIM35Q9UPQ4 Evf-2_5p.1-201ENST00000614213 142 ntBASIC3.23□□□□□ -1.89
TRIM35Q9UPQ4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM35Q9UPQ4 AC023934.1-201ENST00000574529 2389 ntBASIC3.22□□□□□ -1.89
TRIM35Q9UPQ4 RNA5SP289-201ENST00000362332 137 ntBASIC3.22□□□□□ -1.89
TRIM35Q9UPQ4 RNU6-1039P-201ENST00000383931 107 ntBASIC3.22□□□□□ -1.89
TRIM35Q9UPQ4 RNU7-24P-201ENST00000458867 62 ntBASIC3.22□□□□□ -1.89
TRIM35Q9UPQ4 MIR6082-201ENST00000613604 109 ntBASIC3.22□□□□□ -1.89
TRIM35Q9UPQ4 MIR194-1-201ENST00000384892 85 ntBASIC3.21□□□□□ -1.9
TRIM35Q9UPQ4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TRIM35Q9UPQ4 AC004965.1-201ENST00000413033 213 ntBASIC3.21□□□□□ -1.9
TRIM35Q9UPQ4 RPL23AP42-201ENST00000471152 471 ntBASIC3.21□□□□□ -1.9
TRIM35Q9UPQ4 AC138907.6-201ENST00000568401 126 ntBASIC3.21□□□□□ -1.9
TRIM35Q9UPQ4 AC138869.1-201ENST00000568623 124 ntBASIC3.21□□□□□ -1.9
TRIM35Q9UPQ4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TRIM35Q9UPQ4 Y_RNA.13-201ENST00000362403 112 ntBASIC3.2□□□□□ -1.9
TRIM35Q9UPQ4 RNA5SP215-201ENST00000363440 122 ntBASIC3.2□□□□□ -1.9
TRIM35Q9UPQ4 RNU6-645P-201ENST00000364649 106 ntBASIC3.2□□□□□ -1.9
TRIM35Q9UPQ4 SNRPGP19-201ENST00000603826 189 ntBASIC3.2□□□□□ -1.9
TRIM35Q9UPQ4 RNU6-92P-201ENST00000605893 104 ntBASIC3.2□□□□□ -1.9
TRIM35Q9UPQ4 MIR6509-201ENST00000614603 85 ntBASIC3.2□□□□□ -1.9
TRIM35Q9UPQ4 MIR6516-201ENST00000630554 81 ntBASIC3.2□□□□□ -1.9
TRIM35Q9UPQ4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM35Q9UPQ4 RNA5SP100-201ENST00000410903 110 ntBASIC3.19□□□□□ -1.9
TRIM35Q9UPQ4 RNA5SP59-201ENST00000410922 110 ntBASIC3.19□□□□□ -1.9
TRIM35Q9UPQ4 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.19□□□□□ -1.9
TRIM35Q9UPQ4 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.19□□□□□ -1.9
TRIM35Q9UPQ4 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.19□□□□□ -1.9
TRIM35Q9UPQ4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM35Q9UPQ4 RNU6-580P-201ENST00000365159 107 ntBASIC3.18□□□□□ -1.9
TRIM35Q9UPQ4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM35Q9UPQ4 MIR887-201ENST00000401258 79 ntBASIC3.18□□□□□ -1.9
TRIM35Q9UPQ4 RNU6-287P-201ENST00000516230 98 ntBASIC3.18□□□□□ -1.9
TRIM35Q9UPQ4 RNU6-765P-201ENST00000516916 99 ntBASIC3.18□□□□□ -1.9
TRIM35Q9UPQ4 AC046143.2-201ENST00000609789 160 ntBASIC3.18□□□□□ -1.9
TRIM35Q9UPQ4 5S_rRNA.15-201ENST00000611169 127 ntBASIC3.18□□□□□ -1.9
TRIM35Q9UPQ4 RNU1-51P-201ENST00000365345 176 ntBASIC3.17□□□□□ -1.9
TRIM35Q9UPQ4 MIR627-201ENST00000384979 97 ntBASIC3.17□□□□□ -1.9
TRIM35Q9UPQ4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.17□□□□□ -1.9
TRIM35Q9UPQ4 SNORA31.17-201ENST00000516953 127 ntBASIC3.17□□□□□ -1.9
TRIM35Q9UPQ4 U1.36-201ENST00000620684 176 ntBASIC3.17□□□□□ -1.9
TRIM35Q9UPQ4 AC009487.2-201ENST00000420969 6821 ntBASIC3.17□□□□□ -1.9
TRIM35Q9UPQ4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM35Q9UPQ4 MIR21-201ENST00000362134 72 ntBASIC3.16□□□□□ -1.9
TRIM35Q9UPQ4 RNU6-1312P-201ENST00000362425 108 ntBASIC3.16□□□□□ -1.9
TRIM35Q9UPQ4 RNU6-495P-201ENST00000362995 107 ntBASIC3.16□□□□□ -1.9
TRIM35Q9UPQ4 RNU7-185P-201ENST00000459215 60 ntBASIC3.16□□□□□ -1.9
TRIM35Q9UPQ4 AC026436.1-201ENST00000510537 270 ntBASIC3.16□□□□□ -1.9
TRIM35Q9UPQ4 RNU6-922P-201ENST00000516753 99 ntBASIC3.16□□□□□ -1.9
TRIM35Q9UPQ4 MIR4298-201ENST00000584380 73 ntBASIC3.16□□□□□ -1.9
TRIM35Q9UPQ4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.16□□□□□ -1.9
TRIM35Q9UPQ4 RNA5SP259-201ENST00000365541 109 ntBASIC3.15□□□□□ -1.91
TRIM35Q9UPQ4 MIR1291-201ENST00000627649 87 ntBASIC3.15□□□□□ -1.91
TRIM35Q9UPQ4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM35Q9UPQ4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM35Q9UPQ4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TRIM35Q9UPQ4 SUMO2P12-201ENST00000405924 140 ntBASIC3.14□□□□□ -1.91
TRIM35Q9UPQ4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM35Q9UPQ4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
TRIM35Q9UPQ4 SNORD115-44-201ENST00000365391 82 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms