Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 MIR6733-201ENST00000635723 61 ntBASIC3.19□□□□□ -1.9
PHF8Q9UPP1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.19□□□□□ -1.9
PHF8Q9UPP1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PHF8Q9UPP1 MIR377-201ENST00000362145 69 ntBASIC3.18□□□□□ -1.9
PHF8Q9UPP1 RNU6-681P-201ENST00000364012 104 ntBASIC3.18□□□□□ -1.9
PHF8Q9UPP1 Y_RNA.239-201ENST00000364444 113 ntBASIC3.18□□□□□ -1.9
PHF8Q9UPP1 SNORD115-31-201ENST00000365318 82 ntBASIC3.18□□□□□ -1.9
PHF8Q9UPP1 snoU13.17-201ENST00000458802 104 ntBASIC3.18□□□□□ -1.9
PHF8Q9UPP1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PHF8Q9UPP1 RNU6-154P-201ENST00000384306 106 ntBASIC3.17□□□□□ -1.9
PHF8Q9UPP1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.17□□□□□ -1.9
PHF8Q9UPP1 RPS27P16-201ENST00000425758 201 ntBASIC3.17□□□□□ -1.9
PHF8Q9UPP1 SNORA25.16-201ENST00000516741 121 ntBASIC3.17□□□□□ -1.9
PHF8Q9UPP1 RNU6-922P-201ENST00000516753 99 ntBASIC3.17□□□□□ -1.9
PHF8Q9UPP1 RNU11-2P-201ENST00000516898 142 ntBASIC3.17□□□□□ -1.9
PHF8Q9UPP1 AL353997.5-201ENST00000618886 171 ntBASIC3.17□□□□□ -1.9
PHF8Q9UPP1 FO624990.1-201ENST00000636373 85 ntBASIC3.17□□□□□ -1.9
PHF8Q9UPP1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PHF8Q9UPP1 RNU6-340P-201ENST00000364005 107 ntBASIC3.16□□□□□ -1.9
PHF8Q9UPP1 Y_RNA.207-201ENST00000364142 106 ntBASIC3.16□□□□□ -1.9
PHF8Q9UPP1 RNU6-291P-201ENST00000384720 107 ntBASIC3.16□□□□□ -1.9
PHF8Q9UPP1 RNU6-987P-201ENST00000384759 104 ntBASIC3.16□□□□□ -1.9
PHF8Q9UPP1 Y_RNA.588-201ENST00000391254 102 ntBASIC3.16□□□□□ -1.9
PHF8Q9UPP1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.16□□□□□ -1.9
PHF8Q9UPP1 MIR4529-201ENST00000578110 78 ntBASIC3.16□□□□□ -1.9
PHF8Q9UPP1 MIR548H5-201ENST00000580314 60 ntBASIC3.16□□□□□ -1.9
PHF8Q9UPP1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PHF8Q9UPP1 SNORD100-201ENST00000408573 76 ntBASIC3.15□□□□□ -1.91
PHF8Q9UPP1 SNORD93-201ENST00000408813 74 ntBASIC3.15□□□□□ -1.91
PHF8Q9UPP1 MIR18B-201ENST00000454574 71 ntBASIC3.15□□□□□ -1.91
PHF8Q9UPP1 Y_RNA.676-201ENST00000516393 96 ntBASIC3.15□□□□□ -1.91
PHF8Q9UPP1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
PHF8Q9UPP1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PHF8Q9UPP1 MIR101-2-201ENST00000362195 79 ntBASIC3.14□□□□□ -1.91
PHF8Q9UPP1 SNORA25.3-201ENST00000363205 127 ntBASIC3.14□□□□□ -1.91
PHF8Q9UPP1 SNORA67.3-201ENST00000384366 140 ntBASIC3.14□□□□□ -1.91
PHF8Q9UPP1 Y_RNA.536-201ENST00000384621 113 ntBASIC3.14□□□□□ -1.91
PHF8Q9UPP1 AC244636.1-201ENST00000421152 228 ntBASIC3.14□□□□□ -1.91
PHF8Q9UPP1 JTBP1-201ENST00000441314 247 ntBASIC3.14□□□□□ -1.91
PHF8Q9UPP1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.14□□□□□ -1.91
PHF8Q9UPP1 GHRLOS.1-201ENST00000610995 70 ntBASIC3.14□□□□□ -1.91
PHF8Q9UPP1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PHF8Q9UPP1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PHF8Q9UPP1 MIR221-201ENST00000385135 110 ntBASIC3.13□□□□□ -1.91
PHF8Q9UPP1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.13□□□□□ -1.91
PHF8Q9UPP1 TRDV1-202ENST00000621643 102 ntBASIC3.13□□□□□ -1.91
PHF8Q9UPP1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
PHF8Q9UPP1 RNU6-330P-201ENST00000363015 107 ntBASIC3.12□□□□□ -1.91
PHF8Q9UPP1 Y_RNA.371-201ENST00000365591 113 ntBASIC3.12□□□□□ -1.91
PHF8Q9UPP1 SNORD88.1-201ENST00000408684 91 ntBASIC3.12□□□□□ -1.91
PHF8Q9UPP1 RNU4-37P-201ENST00000410214 84 ntBASIC3.12□□□□□ -1.91
PHF8Q9UPP1 RNU7-195P-201ENST00000458793 62 ntBASIC3.12□□□□□ -1.91
PHF8Q9UPP1 RNA5SP458-201ENST00000516188 119 ntBASIC3.12□□□□□ -1.91
PHF8Q9UPP1 SNORA31.25-201ENST00000517242 134 ntBASIC3.12□□□□□ -1.91
PHF8Q9UPP1 AC005520.4-201ENST00000604337 90 ntBASIC3.12□□□□□ -1.91
PHF8Q9UPP1 uc_338.6-201ENST00000613544 171 ntBASIC3.12□□□□□ -1.91
PHF8Q9UPP1 RNU6-1260P-201ENST00000362944 107 ntBASIC3.11□□□□□ -1.91
PHF8Q9UPP1 RNU1-36P-201ENST00000365130 165 ntBASIC3.11□□□□□ -1.91
PHF8Q9UPP1 Y_RNA.606-201ENST00000410579 103 ntBASIC3.11□□□□□ -1.91
PHF8Q9UPP1 TRAJ51-201ENST00000504127 63 ntBASIC3.11□□□□□ -1.91
PHF8Q9UPP1 Y_RNA.809-201ENST00000516058 95 ntBASIC3.11□□□□□ -1.91
PHF8Q9UPP1 RNU6-250P-201ENST00000516958 103 ntBASIC3.11□□□□□ -1.91
PHF8Q9UPP1 MIR3675-201ENST00000583661 73 ntBASIC3.11□□□□□ -1.91
PHF8Q9UPP1 MIR6516-201ENST00000630554 81 ntBASIC3.11□□□□□ -1.91
PHF8Q9UPP1 MIR219B-201ENST00000637023 88 ntBASIC3.11□□□□□ -1.91
PHF8Q9UPP1 MTND4LP19-201ENST00000403051 166 ntBASIC3.1□□□□□ -1.91
PHF8Q9UPP1 RPL23AP42-201ENST00000471152 471 ntBASIC3.1□□□□□ -1.91
PHF8Q9UPP1 SNRPGP19-201ENST00000603826 189 ntBASIC3.1□□□□□ -1.91
PHF8Q9UPP1 RNU6-403P-201ENST00000363163 104 ntBASIC3.09□□□□□ -1.91
PHF8Q9UPP1 AL133373.1-201ENST00000497098 94 ntBASIC3.09□□□□□ -1.91
PHF8Q9UPP1 AP003716.2-201ENST00000528260 108 ntBASIC3.09□□□□□ -1.91
PHF8Q9UPP1 RNU6-664P-201ENST00000362381 107 ntBASIC3.08□□□□□ -1.92
PHF8Q9UPP1 Y_RNA.56-201ENST00000362798 112 ntBASIC3.08□□□□□ -1.92
PHF8Q9UPP1 RNU6-580P-201ENST00000365159 107 ntBASIC3.08□□□□□ -1.92
PHF8Q9UPP1 SNORD101-201ENST00000384027 73 ntBASIC3.08□□□□□ -1.92
PHF8Q9UPP1 RNU6-895P-201ENST00000384125 103 ntBASIC3.08□□□□□ -1.92
PHF8Q9UPP1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PHF8Q9UPP1 MIR8053-201ENST00000613344 75 ntBASIC3.08□□□□□ -1.92
PHF8Q9UPP1 MIR21-201ENST00000362134 72 ntBASIC3.07□□□□□ -1.92
PHF8Q9UPP1 MIR4696-201ENST00000581431 70 ntBASIC3.07□□□□□ -1.92
PHF8Q9UPP1 AL049779.4-201ENST00000604500 156 ntBASIC3.07□□□□□ -1.92
PHF8Q9UPP1 MIR6766-201ENST00000622641 72 ntBASIC3.07□□□□□ -1.92
PHF8Q9UPP1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PHF8Q9UPP1 SNORA25.4-201ENST00000363666 124 ntBASIC3.06□□□□□ -1.92
PHF8Q9UPP1 U8.13-201ENST00000390842 128 ntBASIC3.06□□□□□ -1.92
PHF8Q9UPP1 RNU6-630P-201ENST00000391258 106 ntBASIC3.06□□□□□ -1.92
PHF8Q9UPP1 AC097510.1-201ENST00000510945 133 ntBASIC3.06□□□□□ -1.92
PHF8Q9UPP1 MIR514B-201ENST00000516774 80 ntBASIC3.06□□□□□ -1.92
PHF8Q9UPP1 MIR4446-201ENST00000578505 67 ntBASIC3.06□□□□□ -1.92
PHF8Q9UPP1 RNU2-19P-201ENST00000517288 84 ntBASIC3.05□□□□□ -1.92
PHF8Q9UPP1 AC013244.2-201ENST00000603396 103 ntBASIC3.05□□□□□ -1.92
PHF8Q9UPP1 DLEU2_3.1-201ENST00000620005 73 ntBASIC3.05□□□□□ -1.92
PHF8Q9UPP1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PHF8Q9UPP1 RNA5SP393-201ENST00000363423 117 ntBASIC3.04□□□□□ -1.92
PHF8Q9UPP1 snoU13.25-201ENST00000458945 104 ntBASIC3.04□□□□□ -1.92
PHF8Q9UPP1 RNU6-295P-201ENST00000516901 104 ntBASIC3.04□□□□□ -1.92
PHF8Q9UPP1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC3.04□□□□□ -1.92
PHF8Q9UPP1 MTRNR2L2-201ENST00000604882 87 ntBASIC3.04□□□□□ -1.92
PHF8Q9UPP1 AC010297.1-201ENST00000623948 149 ntBASIC3.04□□□□□ -1.92
PHF8Q9UPP1 AL596028.1-201ENST00000326971 197 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms