Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MIR3163-201ENST00000581592 73 ntBASIC0.88□□□□□ -2.27
CLIP2Q9UDT6 RNU6-94P-201ENST00000607728 107 ntBASIC0.88□□□□□ -2.27
CLIP2Q9UDT6 AC105081.1-201ENST00000617727 106 ntBASIC0.88□□□□□ -2.27
CLIP2Q9UDT6 MIR6740-201ENST00000618268 113 ntBASIC0.88□□□□□ -2.27
CLIP2Q9UDT6 MIR6835-201ENST00000621552 64 ntBASIC0.88□□□□□ -2.27
CLIP2Q9UDT6 MIR4679-1-201ENST00000637619 75 ntBASIC0.88□□□□□ -2.27
CLIP2Q9UDT6 MIR6866-201ENST00000638146 69 ntBASIC0.88□□□□□ -2.27
CLIP2Q9UDT6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CLIP2Q9UDT6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
CLIP2Q9UDT6 SNORD115-19-201ENST00000363098 82 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 SNORD115-18-201ENST00000363293 82 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 RNY4P6-201ENST00000363667 96 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 SNORD115-17-201ENST00000364612 82 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 Y_RNA.430-201ENST00000384081 110 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 SNORA51.5-201ENST00000384126 131 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 RNY1P7-201ENST00000384743 110 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 MIR577-201ENST00000385196 96 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 RNU6-205P-201ENST00000390858 107 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 SNORA75.2-201ENST00000391138 150 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 SNORA75.3-201ENST00000391231 150 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 RNU4-69P-201ENST00000410677 143 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 AC015818.7-201ENST00000428754 109 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 AC087499.7-201ENST00000441958 109 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 snoU13.16-201ENST00000459350 104 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 RNU6-795P-201ENST00000516323 103 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 SNORD67.1-201ENST00000516618 108 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 RNA5SP170-201ENST00000517150 101 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 AP003716.2-201ENST00000528260 108 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 MIR4714-201ENST00000580728 77 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 AL162726.3-218ENST00000636401 95 ntBASIC0.87□□□□□ -2.27
CLIP2Q9UDT6 HSBP1P2-201ENST00000299671 229 ntBASIC0.86□□□□□ -2.27
CLIP2Q9UDT6 RNU6-766P-201ENST00000362478 107 ntBASIC0.86□□□□□ -2.27
CLIP2Q9UDT6 RNU6-1131P-201ENST00000364955 107 ntBASIC0.86□□□□□ -2.27
CLIP2Q9UDT6 Y_RNA.360-201ENST00000365512 102 ntBASIC0.86□□□□□ -2.27
CLIP2Q9UDT6 MIR759-201ENST00000390224 91 ntBASIC0.86□□□□□ -2.27
CLIP2Q9UDT6 AC096949.1-201ENST00000412047 152 ntBASIC0.86□□□□□ -2.27
CLIP2Q9UDT6 RPS3AP1-201ENST00000413190 320 ntBASIC0.86□□□□□ -2.27
CLIP2Q9UDT6 RPL39P25-201ENST00000449384 154 ntBASIC0.86□□□□□ -2.27
CLIP2Q9UDT6 RNU6-904P-201ENST00000516206 101 ntBASIC0.86□□□□□ -2.27
CLIP2Q9UDT6 MIR5582-201ENST00000579697 68 ntBASIC0.86□□□□□ -2.27
CLIP2Q9UDT6 AC020891.4-201ENST00000605745 93 ntBASIC0.86□□□□□ -2.27
CLIP2Q9UDT6 AC012531.4-201ENST00000616509 177 ntBASIC0.86□□□□□ -2.27
CLIP2Q9UDT6 AP001318.4-201ENST00000616637 121 ntBASIC0.86□□□□□ -2.27
CLIP2Q9UDT6 MIR6516-201ENST00000630554 81 ntBASIC0.86□□□□□ -2.27
CLIP2Q9UDT6 RNU6-1255P-201ENST00000363434 112 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 RNU6-1099P-201ENST00000363533 107 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 RNU4-67P-201ENST00000364569 141 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 RNU6-32P-201ENST00000383948 107 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 RNU6-13P-201ENST00000384248 107 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 RNU6-12P-201ENST00000384604 107 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 RNU6-41P-201ENST00000384741 107 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 MIR206-201ENST00000384872 86 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 RNU6-1321P-201ENST00000390905 107 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 AL606490.4-201ENST00000423117 127 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 Y_RNA.677-201ENST00000516401 85 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 RNU6-521P-201ENST00000516663 105 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 RNU7-35P-201ENST00000517174 62 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 AC133485.1-201ENST00000567176 124 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 AC138907.6-201ENST00000568401 126 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 AC106800.4-201ENST00000614905 153 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 SEPT14P17-201ENST00000617978 177 ntBASIC0.85□□□□□ -2.27
CLIP2Q9UDT6 RNU6-363P-201ENST00000362895 105 ntBASIC0.84□□□□□ -2.27
CLIP2Q9UDT6 RNA5SP264-201ENST00000363115 107 ntBASIC0.84□□□□□ -2.27
CLIP2Q9UDT6 Y_RNA.155-201ENST00000363632 101 ntBASIC0.84□□□□□ -2.27
CLIP2Q9UDT6 RNY1P13-201ENST00000365030 105 ntBASIC0.84□□□□□ -2.27
CLIP2Q9UDT6 MIR34C-201ENST00000384831 77 ntBASIC0.84□□□□□ -2.27
CLIP2Q9UDT6 MIR508-201ENST00000384857 115 ntBASIC0.84□□□□□ -2.27
CLIP2Q9UDT6 MIR942-201ENST00000401111 86 ntBASIC0.84□□□□□ -2.27
CLIP2Q9UDT6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.84□□□□□ -2.27
CLIP2Q9UDT6 RNY4P30-201ENST00000410216 95 ntBASIC0.84□□□□□ -2.27
CLIP2Q9UDT6 RNU6-1086P-201ENST00000410930 100 ntBASIC0.84□□□□□ -2.27
CLIP2Q9UDT6 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.84□□□□□ -2.27
CLIP2Q9UDT6 RNU7-79P-201ENST00000516082 62 ntBASIC0.84□□□□□ -2.27
CLIP2Q9UDT6 RNU6-412P-201ENST00000516434 106 ntBASIC0.84□□□□□ -2.27
CLIP2Q9UDT6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.84□□□□□ -2.27
CLIP2Q9UDT6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.84□□□□□ -2.27
CLIP2Q9UDT6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.84□□□□□ -2.27
CLIP2Q9UDT6 Y_RNA.448-201ENST00000384185 108 ntBASIC0.83□□□□□ -2.28
CLIP2Q9UDT6 RNU6-1201P-201ENST00000384227 107 ntBASIC0.83□□□□□ -2.28
CLIP2Q9UDT6 Y_RNA.467-201ENST00000384297 102 ntBASIC0.83□□□□□ -2.28
CLIP2Q9UDT6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.83□□□□□ -2.28
CLIP2Q9UDT6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.83□□□□□ -2.28
CLIP2Q9UDT6 RNU6-162P-201ENST00000516228 103 ntBASIC0.83□□□□□ -2.28
CLIP2Q9UDT6 RNU7-137P-201ENST00000516788 62 ntBASIC0.83□□□□□ -2.28
CLIP2Q9UDT6 RNU6-1006P-201ENST00000516998 103 ntBASIC0.83□□□□□ -2.28
CLIP2Q9UDT6 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.83□□□□□ -2.28
CLIP2Q9UDT6 AC141846.1-201ENST00000568348 142 ntBASIC0.83□□□□□ -2.28
CLIP2Q9UDT6 MIR3152-201ENST00000579801 74 ntBASIC0.83□□□□□ -2.28
CLIP2Q9UDT6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.83□□□□□ -2.28
CLIP2Q9UDT6 MIR30D-201ENST00000362283 70 ntBASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 Y_RNA.43-201ENST00000362670 111 ntBASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 Y_RNA.49-201ENST00000362714 112 ntBASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 RNY3P2-201ENST00000362918 102 ntBASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 RNU6-832P-201ENST00000363319 107 ntBASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 Y_RNA.309-201ENST00000365046 111 ntBASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 Y_RNA.342-201ENST00000365352 113 ntBASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 MIR608-201ENST00000384820 100 ntBASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 MIR588-201ENST00000384900 83 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms