Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC097510.1-201ENST00000510945 133 ntBASIC-1.66□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.66□□□□□ -2.68
VPS29Q9UBQ0 RNU6-706P-201ENST00000517229 104 ntBASIC-1.66□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.67□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.67□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.67□□□□□ -2.68
VPS29Q9UBQ0 MTND4LP30-201ENST00000454092 297 ntBASIC-1.67□□□□□ -2.68
VPS29Q9UBQ0 SNORA40.14-201ENST00000516543 86 ntBASIC-1.67□□□□□ -2.68
VPS29Q9UBQ0 MIR3908-201ENST00000579798 126 ntBASIC-1.67□□□□□ -2.68
VPS29Q9UBQ0 MIR3688-2-201ENST00000636963 87 ntBASIC-1.67□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.68□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.68□□□□□ -2.68
VPS29Q9UBQ0 MIR582-201ENST00000365731 98 ntBASIC-1.68□□□□□ -2.68
VPS29Q9UBQ0 AL606845.1-201ENST00000404881 255 ntBASIC-1.68□□□□□ -2.68
VPS29Q9UBQ0 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.68□□□□□ -2.68
VPS29Q9UBQ0 AP001362.1-201ENST00000625165 124 ntBASIC-1.68□□□□□ -2.68
VPS29Q9UBQ0 snoR1.1-201ENST00000628177 80 ntBASIC-1.68□□□□□ -2.68
VPS29Q9UBQ0 snoU18.1-201ENST00000629629 71 ntBASIC-1.68□□□□□ -2.68
VPS29Q9UBQ0 RNU4-32P-201ENST00000363404 141 ntBASIC-1.69□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.69□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.69□□□□□ -2.68
VPS29Q9UBQ0 SNORD114-17-201ENST00000364699 75 ntBASIC-1.69□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.69□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.69□□□□□ -2.68
VPS29Q9UBQ0 MIR1270-201ENST00000459320 83 ntBASIC-1.69□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.69□□□□□ -2.68
VPS29Q9UBQ0 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.69□□□□□ -2.68
VPS29Q9UBQ0 AL442663.2-201ENST00000554385 511 ntBASIC-1.69□□□□□ -2.68
VPS29Q9UBQ0 SNORA25.1-201ENST00000362326 128 ntBASIC-1.7□□□□□ -2.68
VPS29Q9UBQ0 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.7□□□□□ -2.68
VPS29Q9UBQ0 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.7□□□□□ -2.68
VPS29Q9UBQ0 MIR206-201ENST00000384872 86 ntBASIC-1.7□□□□□ -2.68
VPS29Q9UBQ0 SNORA79-201ENST00000408376 140 ntBASIC-1.7□□□□□ -2.68
VPS29Q9UBQ0 SNORA20.3-201ENST00000516880 132 ntBASIC-1.7□□□□□ -2.68
VPS29Q9UBQ0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.7□□□□□ -2.68
VPS29Q9UBQ0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.7□□□□□ -2.68
VPS29Q9UBQ0 MIR376A1-201ENST00000616574 68 ntBASIC-1.7□□□□□ -2.68
VPS29Q9UBQ0 MIR4320-201ENST00000636981 65 ntBASIC-1.7□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.71□□□□□ -2.68
VPS29Q9UBQ0 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.71□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.71□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.71□□□□□ -2.68
VPS29Q9UBQ0 MIR516A2-201ENST00000384888 90 ntBASIC-1.71□□□□□ -2.68
VPS29Q9UBQ0 MIR516A1-201ENST00000385033 90 ntBASIC-1.71□□□□□ -2.68
VPS29Q9UBQ0 MIR548E-201ENST00000408287 88 ntBASIC-1.71□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.72□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.72□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.72□□□□□ -2.68
VPS29Q9UBQ0 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.72□□□□□ -2.68
VPS29Q9UBQ0 RNU6-592P-201ENST00000411333 103 ntBASIC-1.72□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.73□□□□□ -2.69
VPS29Q9UBQ0 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.73□□□□□ -2.69
VPS29Q9UBQ0 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.73□□□□□ -2.69
VPS29Q9UBQ0 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.73□□□□□ -2.69
VPS29Q9UBQ0 TRDV1-202ENST00000621643 102 ntBASIC-1.73□□□□□ -2.69
VPS29Q9UBQ0 AL606534.2-204ENST00000635008 178 ntBASIC-1.73□□□□□ -2.69
VPS29Q9UBQ0 U6.100-201ENST00000636230 99 ntBASIC-1.73□□□□□ -2.69
VPS29Q9UBQ0 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.74□□□□□ -2.69
VPS29Q9UBQ0 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.74□□□□□ -2.69
VPS29Q9UBQ0 MIR124-2-201ENST00000385081 109 ntBASIC-1.74□□□□□ -2.69
VPS29Q9UBQ0 MIR616-201ENST00000385293 97 ntBASIC-1.74□□□□□ -2.69
VPS29Q9UBQ0 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.74□□□□□ -2.69
VPS29Q9UBQ0 RNU6-850P-201ENST00000516934 103 ntBASIC-1.74□□□□□ -2.69
VPS29Q9UBQ0 RNU6-762P-201ENST00000517107 102 ntBASIC-1.74□□□□□ -2.69
VPS29Q9UBQ0 AC037487.3-201ENST00000606668 112 ntBASIC-1.74□□□□□ -2.69
VPS29Q9UBQ0 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.75□□□□□ -2.69
VPS29Q9UBQ0 RNU6-588P-201ENST00000410281 105 ntBASIC-1.75□□□□□ -2.69
VPS29Q9UBQ0 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.75□□□□□ -2.69
VPS29Q9UBQ0 AL161932.1-201ENST00000437408 146 ntBASIC-1.75□□□□□ -2.69
VPS29Q9UBQ0 MTND1P29-201ENST00000448112 647 ntBASIC-1.75□□□□□ -2.69
VPS29Q9UBQ0 SNORD57-201ENST00000448188 72 ntBASIC-1.75□□□□□ -2.69
VPS29Q9UBQ0 RNU6-559P-201ENST00000516151 98 ntBASIC-1.75□□□□□ -2.69
VPS29Q9UBQ0 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.75□□□□□ -2.69
VPS29Q9UBQ0 RNU6-453P-201ENST00000516819 85 ntBASIC-1.75□□□□□ -2.69
VPS29Q9UBQ0 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.76□□□□□ -2.69
VPS29Q9UBQ0 RNU6-290P-201ENST00000365212 101 ntBASIC-1.76□□□□□ -2.69
VPS29Q9UBQ0 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.76□□□□□ -2.69
VPS29Q9UBQ0 AC138207.3-201ENST00000585289 166 ntBASIC-1.76□□□□□ -2.69
VPS29Q9UBQ0 SNORD58B-201ENST00000607313 66 ntBASIC-1.76□□□□□ -2.69
VPS29Q9UBQ0 AC103591.3-201ENST00000608684 209 ntBASIC-1.76□□□□□ -2.69
VPS29Q9UBQ0 SNORD81.2-201ENST00000365153 76 ntBASIC-1.77□□□□□ -2.69
VPS29Q9UBQ0 RNU6-211P-201ENST00000384047 107 ntBASIC-1.77□□□□□ -2.69
VPS29Q9UBQ0 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.77□□□□□ -2.69
VPS29Q9UBQ0 MIR624-201ENST00000385217 97 ntBASIC-1.77□□□□□ -2.69
VPS29Q9UBQ0 RNA5SP476-201ENST00000516613 103 ntBASIC-1.77□□□□□ -2.69
VPS29Q9UBQ0 AC025253.1-201ENST00000613623 543 ntBASIC-1.77□□□□□ -2.69
VPS29Q9UBQ0 MIR548O2-201ENST00000616090 70 ntBASIC-1.77□□□□□ -2.69
VPS29Q9UBQ0 U4.5-201ENST00000617137 123 ntBASIC-1.77□□□□□ -2.69
VPS29Q9UBQ0 AC022079.1-201ENST00000621546 602 ntBASIC-1.77□□□□□ -2.69
VPS29Q9UBQ0 AC132825.6-201ENST00000638861 357 ntBASIC-1.77□□□□□ -2.69
VPS29Q9UBQ0 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.78□□□□□ -2.69
VPS29Q9UBQ0 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.78□□□□□ -2.69
VPS29Q9UBQ0 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.78□□□□□ -2.69
VPS29Q9UBQ0 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.78□□□□□ -2.69
VPS29Q9UBQ0 AC009779.6-201ENST00000603972 165 ntBASIC-1.78□□□□□ -2.69
VPS29Q9UBQ0 MIR376B-201ENST00000614515 100 ntBASIC-1.78□□□□□ -2.69
VPS29Q9UBQ0 AC084781.2-201ENST00000615568 161 ntBASIC-1.78□□□□□ -2.69
VPS29Q9UBQ0 AC087741.2-201ENST00000619415 172 ntBASIC-1.78□□□□□ -2.69
VPS29Q9UBQ0 SNORD115-23-201ENST00000364461 82 ntBASIC-1.79□□□□□ -2.7
VPS29Q9UBQ0 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.79□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 221.5 ms