Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNU6-702P-201ENST00000364982 107 ntBASIC-0.08□□□□□ -2.42
CLCF1Q9UBD9 RNU6-768P-201ENST00000384683 107 ntBASIC-0.08□□□□□ -2.42
CLCF1Q9UBD9 MIR548H2-201ENST00000408874 88 ntBASIC-0.08□□□□□ -2.42
CLCF1Q9UBD9 MTCYBP9-201ENST00000431021 303 ntBASIC-0.08□□□□□ -2.42
CLCF1Q9UBD9 RPL39P34-201ENST00000477141 156 ntBASIC-0.08□□□□□ -2.42
CLCF1Q9UBD9 MIR4743-201ENST00000584576 69 ntBASIC-0.08□□□□□ -2.42
CLCF1Q9UBD9 RNU7-10P-201ENST00000607194 63 ntBASIC-0.08□□□□□ -2.42
CLCF1Q9UBD9 MIR371B-201ENST00000638082 66 ntBASIC-0.08□□□□□ -2.42
CLCF1Q9UBD9 RNY1P2-201ENST00000364820 117 ntBASIC-0.09□□□□□ -2.42
CLCF1Q9UBD9 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.09□□□□□ -2.42
CLCF1Q9UBD9 RNU6-429P-201ENST00000384582 108 ntBASIC-0.09□□□□□ -2.42
CLCF1Q9UBD9 MIR892B-201ENST00000401279 77 ntBASIC-0.09□□□□□ -2.42
CLCF1Q9UBD9 AC108059.2-201ENST00000434626 151 ntBASIC-0.09□□□□□ -2.42
CLCF1Q9UBD9 AC107027.2-201ENST00000512197 115 ntBASIC-0.09□□□□□ -2.42
CLCF1Q9UBD9 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.09□□□□□ -2.42
CLCF1Q9UBD9 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.09□□□□□ -2.42
CLCF1Q9UBD9 AL359881.1-201ENST00000602916 267 ntBASIC-0.09□□□□□ -2.42
CLCF1Q9UBD9 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.1□□□□□ -2.43
CLCF1Q9UBD9 RNU6-726P-201ENST00000364680 107 ntBASIC-0.1□□□□□ -2.43
CLCF1Q9UBD9 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.1□□□□□ -2.43
CLCF1Q9UBD9 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.1□□□□□ -2.43
CLCF1Q9UBD9 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.1□□□□□ -2.43
CLCF1Q9UBD9 MIR145-201ENST00000384967 88 ntBASIC-0.1□□□□□ -2.43
CLCF1Q9UBD9 RNU6-918P-201ENST00000391219 106 ntBASIC-0.1□□□□□ -2.43
CLCF1Q9UBD9 RNU2-35P-201ENST00000516446 142 ntBASIC-0.1□□□□□ -2.43
CLCF1Q9UBD9 RNU6-782P-201ENST00000516852 104 ntBASIC-0.1□□□□□ -2.43
CLCF1Q9UBD9 AC138907.4-201ENST00000570107 226 ntBASIC-0.1□□□□□ -2.43
CLCF1Q9UBD9 RNU1-29P-201ENST00000606574 126 ntBASIC-0.1□□□□□ -2.43
CLCF1Q9UBD9 AC105081.1-201ENST00000617727 106 ntBASIC-0.1□□□□□ -2.43
CLCF1Q9UBD9 RNU6-312P-201ENST00000364629 107 ntBASIC-0.11□□□□□ -2.43
CLCF1Q9UBD9 RNU6-756P-201ENST00000383997 107 ntBASIC-0.11□□□□□ -2.43
CLCF1Q9UBD9 RNU6-929P-201ENST00000384429 107 ntBASIC-0.11□□□□□ -2.43
CLCF1Q9UBD9 SNORA75.5-201ENST00000391291 81 ntBASIC-0.11□□□□□ -2.43
CLCF1Q9UBD9 MIR3128-201ENST00000581957 66 ntBASIC-0.11□□□□□ -2.43
CLCF1Q9UBD9 MIR3149-201ENST00000584629 83 ntBASIC-0.11□□□□□ -2.43
CLCF1Q9UBD9 AC021443.1-201ENST00000604478 211 ntBASIC-0.11□□□□□ -2.43
CLCF1Q9UBD9 AC062037.2-201ENST00000610137 73 ntBASIC-0.11□□□□□ -2.43
CLCF1Q9UBD9 U7.6-201ENST00000610841 64 ntBASIC-0.11□□□□□ -2.43
CLCF1Q9UBD9 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.12□□□□□ -2.43
CLCF1Q9UBD9 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.12□□□□□ -2.43
CLCF1Q9UBD9 SNORA20.1-201ENST00000364790 130 ntBASIC-0.12□□□□□ -2.43
CLCF1Q9UBD9 RNU6-652P-201ENST00000365488 107 ntBASIC-0.12□□□□□ -2.43
CLCF1Q9UBD9 RNU4-69P-201ENST00000410677 143 ntBASIC-0.12□□□□□ -2.43
CLCF1Q9UBD9 RNU7-164P-201ENST00000459221 62 ntBASIC-0.12□□□□□ -2.43
CLCF1Q9UBD9 RNU6-240P-201ENST00000516098 97 ntBASIC-0.12□□□□□ -2.43
CLCF1Q9UBD9 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.12□□□□□ -2.43
CLCF1Q9UBD9 MIR5706-201ENST00000579841 80 ntBASIC-0.12□□□□□ -2.43
CLCF1Q9UBD9 AL162376.1-201ENST00000624117 175 ntBASIC-0.12□□□□□ -2.43
CLCF1Q9UBD9 MIR6844-201ENST00000637122 62 ntBASIC-0.12□□□□□ -2.43
CLCF1Q9UBD9 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.13□□□□□ -2.43
CLCF1Q9UBD9 MIR635-201ENST00000384830 98 ntBASIC-0.13□□□□□ -2.43
CLCF1Q9UBD9 MIR106A-201ENST00000384870 81 ntBASIC-0.13□□□□□ -2.43
CLCF1Q9UBD9 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.13□□□□□ -2.43
CLCF1Q9UBD9 RNU7-104P-201ENST00000459398 79 ntBASIC-0.13□□□□□ -2.43
CLCF1Q9UBD9 RNU7-161P-201ENST00000517289 62 ntBASIC-0.13□□□□□ -2.43
CLCF1Q9UBD9 MIR3646-201ENST00000578301 84 ntBASIC-0.13□□□□□ -2.43
CLCF1Q9UBD9 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.14□□□□□ -2.43
CLCF1Q9UBD9 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.14□□□□□ -2.43
CLCF1Q9UBD9 SNORD18B-201ENST00000365659 72 ntBASIC-0.14□□□□□ -2.43
CLCF1Q9UBD9 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.14□□□□□ -2.43
CLCF1Q9UBD9 MIR568-201ENST00000385036 95 ntBASIC-0.14□□□□□ -2.43
CLCF1Q9UBD9 RNU6-327P-201ENST00000516270 127 ntBASIC-0.14□□□□□ -2.43
CLCF1Q9UBD9 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.14□□□□□ -2.43
CLCF1Q9UBD9 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.15□□□□□ -2.43
CLCF1Q9UBD9 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.15□□□□□ -2.43
CLCF1Q9UBD9 RNA5SP403-201ENST00000363598 108 ntBASIC-0.15□□□□□ -2.43
CLCF1Q9UBD9 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.15□□□□□ -2.43
CLCF1Q9UBD9 SNORD77B-201ENST00000391112 67 ntBASIC-0.15□□□□□ -2.43
CLCF1Q9UBD9 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.15□□□□□ -2.43
CLCF1Q9UBD9 RNU6-111P-201ENST00000517179 105 ntBASIC-0.15□□□□□ -2.43
CLCF1Q9UBD9 SNORA70.25-201ENST00000612741 95 ntBASIC-0.15□□□□□ -2.43
CLCF1Q9UBD9 U4.1-201ENST00000620349 87 ntBASIC-0.15□□□□□ -2.43
CLCF1Q9UBD9 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.15□□□□□ -2.43
CLCF1Q9UBD9 AC073869.9-201ENST00000641610 120 ntBASIC-0.15□□□□□ -2.43
CLCF1Q9UBD9 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.16□□□□□ -2.44
CLCF1Q9UBD9 RNU6-449P-201ENST00000383914 107 ntBASIC-0.16□□□□□ -2.44
CLCF1Q9UBD9 RNU7-48P-201ENST00000458875 63 ntBASIC-0.16□□□□□ -2.44
CLCF1Q9UBD9 RNU7-123P-201ENST00000515911 60 ntBASIC-0.16□□□□□ -2.44
CLCF1Q9UBD9 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.16□□□□□ -2.44
CLCF1Q9UBD9 MIR4500-201ENST00000579472 76 ntBASIC-0.16□□□□□ -2.44
CLCF1Q9UBD9 MIR1295B-201ENST00000636144 60 ntBASIC-0.16□□□□□ -2.44
CLCF1Q9UBD9 MIR501-201ENST00000390204 84 ntBASIC-0.17□□□□□ -2.44
CLCF1Q9UBD9 SNORD41.1-201ENST00000391000 69 ntBASIC-0.17□□□□□ -2.44
CLCF1Q9UBD9 RNU6-269P-201ENST00000391077 97 ntBASIC-0.17□□□□□ -2.44
CLCF1Q9UBD9 RNU6-588P-201ENST00000410281 105 ntBASIC-0.17□□□□□ -2.44
CLCF1Q9UBD9 AL118496.2-201ENST00000448300 230 ntBASIC-0.17□□□□□ -2.44
CLCF1Q9UBD9 RNU7-159P-201ENST00000459284 62 ntBASIC-0.17□□□□□ -2.44
CLCF1Q9UBD9 MIR1270-201ENST00000459320 83 ntBASIC-0.17□□□□□ -2.44
CLCF1Q9UBD9 AC104692.1-201ENST00000472406 90 ntBASIC-0.17□□□□□ -2.44
CLCF1Q9UBD9 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.17□□□□□ -2.44
CLCF1Q9UBD9 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.18□□□□□ -2.44
CLCF1Q9UBD9 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.18□□□□□ -2.44
CLCF1Q9UBD9 RNU6-47P-201ENST00000383866 107 ntBASIC-0.18□□□□□ -2.44
CLCF1Q9UBD9 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.18□□□□□ -2.44
CLCF1Q9UBD9 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.18□□□□□ -2.44
CLCF1Q9UBD9 MIR206-201ENST00000384872 86 ntBASIC-0.18□□□□□ -2.44
CLCF1Q9UBD9 MIR329-2-201ENST00000385029 84 ntBASIC-0.18□□□□□ -2.44
CLCF1Q9UBD9 MIR599-201ENST00000385069 95 ntBASIC-0.18□□□□□ -2.44
CLCF1Q9UBD9 RNU6-239P-201ENST00000390990 99 ntBASIC-0.18□□□□□ -2.44
CLCF1Q9UBD9 MIR548I2-201ENST00000408348 149 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms