Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 RNU6-580P-201ENST00000365159 107 ntBASIC2.07□□□□□ -2.08
CXXC1Q9P0U4 SNORA2B-201ENST00000384583 137 ntBASIC2.07□□□□□ -2.08
CXXC1Q9P0U4 SNORA26.2-201ENST00000390922 122 ntBASIC2.07□□□□□ -2.08
CXXC1Q9P0U4 AC103810.7-201ENST00000607821 91 ntBASIC2.07□□□□□ -2.08
CXXC1Q9P0U4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CXXC1Q9P0U4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CXXC1Q9P0U4 RNU6-392P-201ENST00000364926 101 ntBASIC2.06□□□□□ -2.08
CXXC1Q9P0U4 Y_RNA.330-201ENST00000365230 109 ntBASIC2.06□□□□□ -2.08
CXXC1Q9P0U4 AC048334.1-201ENST00000477975 159 ntBASIC2.06□□□□□ -2.08
CXXC1Q9P0U4 SNORA31.2-201ENST00000516019 134 ntBASIC2.06□□□□□ -2.08
CXXC1Q9P0U4 RNU6-762P-201ENST00000517107 102 ntBASIC2.06□□□□□ -2.08
CXXC1Q9P0U4 RNU6-902P-201ENST00000517212 91 ntBASIC2.06□□□□□ -2.08
CXXC1Q9P0U4 AC138749.4-201ENST00000563970 127 ntBASIC2.06□□□□□ -2.08
CXXC1Q9P0U4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CXXC1Q9P0U4 HSBP1P2-201ENST00000299671 229 ntBASIC2.05□□□□□ -2.08
CXXC1Q9P0U4 RNA5SP133-201ENST00000363368 119 ntBASIC2.05□□□□□ -2.08
CXXC1Q9P0U4 RNU6-1244P-201ENST00000363614 108 ntBASIC2.05□□□□□ -2.08
CXXC1Q9P0U4 RNU6-53P-201ENST00000365367 106 ntBASIC2.05□□□□□ -2.08
CXXC1Q9P0U4 MIR450A2-201ENST00000385022 100 ntBASIC2.05□□□□□ -2.08
CXXC1Q9P0U4 AC104435.1-201ENST00000483483 166 ntBASIC2.05□□□□□ -2.08
CXXC1Q9P0U4 AC079804.2-201ENST00000490376 200 ntBASIC2.05□□□□□ -2.08
CXXC1Q9P0U4 AC090897.1-201ENST00000580909 226 ntBASIC2.05□□□□□ -2.08
CXXC1Q9P0U4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CXXC1Q9P0U4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CXXC1Q9P0U4 RNU6-1125P-201ENST00000363601 107 ntBASIC2.04□□□□□ -2.08
CXXC1Q9P0U4 Y_RNA.173-201ENST00000363776 113 ntBASIC2.04□□□□□ -2.08
CXXC1Q9P0U4 Y_RNA.191-201ENST00000363972 113 ntBASIC2.04□□□□□ -2.08
CXXC1Q9P0U4 Y_RNA.327-201ENST00000365201 102 ntBASIC2.04□□□□□ -2.08
CXXC1Q9P0U4 RNU6-480P-201ENST00000384332 107 ntBASIC2.04□□□□□ -2.08
CXXC1Q9P0U4 RNU7-95P-201ENST00000459222 64 ntBASIC2.04□□□□□ -2.08
CXXC1Q9P0U4 MIR4500-201ENST00000579472 76 ntBASIC2.04□□□□□ -2.08
CXXC1Q9P0U4 AL512598.1-201ENST00000610158 273 ntBASIC2.04□□□□□ -2.08
CXXC1Q9P0U4 uc_338.6-201ENST00000613544 171 ntBASIC2.04□□□□□ -2.08
CXXC1Q9P0U4 SNORD114-26-201ENST00000363543 72 ntBASIC2.03□□□□□ -2.08
CXXC1Q9P0U4 SNORD58A-201ENST00000383875 65 ntBASIC2.03□□□□□ -2.08
CXXC1Q9P0U4 SNORD93-201ENST00000408813 74 ntBASIC2.03□□□□□ -2.08
CXXC1Q9P0U4 RMST_2.1-201ENST00000617263 136 ntBASIC2.03□□□□□ -2.08
CXXC1Q9P0U4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.02□□□□□ -2.09
CXXC1Q9P0U4 Y_RNA.119-201ENST00000363301 96 ntBASIC2.02□□□□□ -2.09
CXXC1Q9P0U4 RNA5SP325-201ENST00000363756 130 ntBASIC2.02□□□□□ -2.09
CXXC1Q9P0U4 SNORD113.3-201ENST00000364630 78 ntBASIC2.02□□□□□ -2.09
CXXC1Q9P0U4 RNY4P29-201ENST00000410801 97 ntBASIC2.02□□□□□ -2.09
CXXC1Q9P0U4 RNU1-98P-201ENST00000458992 160 ntBASIC2.02□□□□□ -2.09
CXXC1Q9P0U4 RNA5SP220-201ENST00000516298 104 ntBASIC2.02□□□□□ -2.09
CXXC1Q9P0U4 MIR4452-201ENST00000583004 71 ntBASIC2.02□□□□□ -2.09
CXXC1Q9P0U4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.02□□□□□ -2.09
CXXC1Q9P0U4 RNU4-52P-201ENST00000384209 138 ntBASIC2.01□□□□□ -2.09
CXXC1Q9P0U4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CXXC1Q9P0U4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.01□□□□□ -2.09
CXXC1Q9P0U4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.01□□□□□ -2.09
CXXC1Q9P0U4 MIRLET7G-201ENST00000362280 84 ntBASIC2□□□□□ -2.09
CXXC1Q9P0U4 Y_RNA.17-201ENST00000362433 111 ntBASIC2□□□□□ -2.09
CXXC1Q9P0U4 Y_RNA.190-201ENST00000363964 101 ntBASIC2□□□□□ -2.09
CXXC1Q9P0U4 RNU6-820P-201ENST00000384273 107 ntBASIC2□□□□□ -2.09
CXXC1Q9P0U4 SNORD116-22-201ENST00000384430 92 ntBASIC2□□□□□ -2.09
CXXC1Q9P0U4 AL591704.2-201ENST00000421658 181 ntBASIC2□□□□□ -2.09
CXXC1Q9P0U4 MIR4255-201ENST00000579351 72 ntBASIC2□□□□□ -2.09
CXXC1Q9P0U4 AL078603.1-201ENST00000603824 313 ntBASIC2□□□□□ -2.09
CXXC1Q9P0U4 AC023934.1-201ENST00000574529 2389 ntBASIC1.99□□□□□ -2.09
CXXC1Q9P0U4 SNORA75.2-201ENST00000391138 150 ntBASIC1.99□□□□□ -2.09
CXXC1Q9P0U4 SNORA75.3-201ENST00000391231 150 ntBASIC1.99□□□□□ -2.09
CXXC1Q9P0U4 MIR1257-201ENST00000408490 117 ntBASIC1.99□□□□□ -2.09
CXXC1Q9P0U4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.99□□□□□ -2.09
CXXC1Q9P0U4 MIR6779-201ENST00000617283 64 ntBASIC1.99□□□□□ -2.09
CXXC1Q9P0U4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CXXC1Q9P0U4 AC008163.1-202ENST00000636004 2889 ntBASIC1.99□□□□□ -2.09
CXXC1Q9P0U4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CXXC1Q9P0U4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CXXC1Q9P0U4 RNU4-58P-201ENST00000363192 141 ntBASIC1.98□□□□□ -2.09
CXXC1Q9P0U4 RNU1-36P-201ENST00000365130 165 ntBASIC1.98□□□□□ -2.09
CXXC1Q9P0U4 RNU6-571P-201ENST00000384128 107 ntBASIC1.98□□□□□ -2.09
CXXC1Q9P0U4 SNORA72.6-201ENST00000384520 129 ntBASIC1.98□□□□□ -2.09
CXXC1Q9P0U4 AC090255.1-201ENST00000495779 349 ntBASIC1.98□□□□□ -2.09
CXXC1Q9P0U4 RN7SKP12-201ENST00000516275 143 ntBASIC1.98□□□□□ -2.09
CXXC1Q9P0U4 RNU1-40P-201ENST00000516816 164 ntBASIC1.98□□□□□ -2.09
CXXC1Q9P0U4 RNU1-97P-201ENST00000516872 164 ntBASIC1.98□□□□□ -2.09
CXXC1Q9P0U4 RNU6-403P-201ENST00000363163 104 ntBASIC1.97□□□□□ -2.09
CXXC1Q9P0U4 RNA5SP160-201ENST00000364866 120 ntBASIC1.97□□□□□ -2.09
CXXC1Q9P0U4 SNORA80D-201ENST00000384488 135 ntBASIC1.97□□□□□ -2.09
CXXC1Q9P0U4 SNORD111-201ENST00000408139 94 ntBASIC1.97□□□□□ -2.09
CXXC1Q9P0U4 SNRPGP12-201ENST00000449481 213 ntBASIC1.97□□□□□ -2.09
CXXC1Q9P0U4 MIR4491-201ENST00000581087 68 ntBASIC1.97□□□□□ -2.09
CXXC1Q9P0U4 AC062037.1-201ENST00000605302 128 ntBASIC1.97□□□□□ -2.09
CXXC1Q9P0U4 MIR6734-201ENST00000621166 68 ntBASIC1.97□□□□□ -2.09
CXXC1Q9P0U4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.97□□□□□ -2.09
CXXC1Q9P0U4 MIR494-201ENST00000349529 81 ntBASIC1.96□□□□□ -2.1
CXXC1Q9P0U4 RNU6-934P-201ENST00000365154 107 ntBASIC1.96□□□□□ -2.1
CXXC1Q9P0U4 MIR181B2-201ENST00000385004 89 ntBASIC1.96□□□□□ -2.1
CXXC1Q9P0U4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.96□□□□□ -2.1
CXXC1Q9P0U4 Y_RNA.593-201ENST00000410292 98 ntBASIC1.96□□□□□ -2.1
CXXC1Q9P0U4 HMGN2P38-201ENST00000423806 265 ntBASIC1.96□□□□□ -2.1
CXXC1Q9P0U4 RNU7-185P-201ENST00000459215 60 ntBASIC1.96□□□□□ -2.1
CXXC1Q9P0U4 AC036111.3-201ENST00000526389 112 ntBASIC1.96□□□□□ -2.1
CXXC1Q9P0U4 IGLL4P-201ENST00000614590 133 ntBASIC1.96□□□□□ -2.1
CXXC1Q9P0U4 MIR8066-201ENST00000617280 78 ntBASIC1.96□□□□□ -2.1
CXXC1Q9P0U4 Y_RNA.57-201ENST00000362806 113 ntBASIC1.95□□□□□ -2.1
CXXC1Q9P0U4 RNY1P1-201ENST00000364372 112 ntBASIC1.95□□□□□ -2.1
CXXC1Q9P0U4 RNU6-910P-201ENST00000390844 107 ntBASIC1.95□□□□□ -2.1
CXXC1Q9P0U4 RNU4-83P-201ENST00000410863 133 ntBASIC1.95□□□□□ -2.1
CXXC1Q9P0U4 SNORD83.1-201ENST00000411362 77 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms