Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 Y_RNA.119-201ENST00000363301 96 ntBASIC0.87□□□□□ -2.27
DDX56Q9NY93 SNORD115-17-201ENST00000364612 82 ntBASIC0.87□□□□□ -2.27
DDX56Q9NY93 RNA5SP117-201ENST00000365294 118 ntBASIC0.87□□□□□ -2.27
DDX56Q9NY93 MIR146A-201ENST00000385201 99 ntBASIC0.87□□□□□ -2.27
DDX56Q9NY93 SNORD100-201ENST00000408573 76 ntBASIC0.87□□□□□ -2.27
DDX56Q9NY93 MIR1276-201ENST00000408707 83 ntBASIC0.87□□□□□ -2.27
DDX56Q9NY93 AL606490.4-201ENST00000423117 127 ntBASIC0.87□□□□□ -2.27
DDX56Q9NY93 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
DDX56Q9NY93 Y_RNA.712-201ENST00000517011 92 ntBASIC0.87□□□□□ -2.27
DDX56Q9NY93 AP003327.1-201ENST00000529684 127 ntBASIC0.87□□□□□ -2.27
DDX56Q9NY93 MIR3910-1-201ENST00000580936 111 ntBASIC0.87□□□□□ -2.27
DDX56Q9NY93 MIR6504-201ENST00000613520 61 ntBASIC0.87□□□□□ -2.27
DDX56Q9NY93 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
DDX56Q9NY93 SNORD115-35-201ENST00000365122 82 ntBASIC0.86□□□□□ -2.27
DDX56Q9NY93 SNORD116-14-201ENST00000383894 92 ntBASIC0.86□□□□□ -2.27
DDX56Q9NY93 SNORD116-17-201ENST00000383929 92 ntBASIC0.86□□□□□ -2.27
DDX56Q9NY93 SNORD116-15-201ENST00000384445 92 ntBASIC0.86□□□□□ -2.27
DDX56Q9NY93 SNORD116-19-201ENST00000384729 92 ntBASIC0.86□□□□□ -2.27
DDX56Q9NY93 MIR548D2-201ENST00000384955 97 ntBASIC0.86□□□□□ -2.27
DDX56Q9NY93 AC002350.1-201ENST00000490759 375 ntBASIC0.86□□□□□ -2.27
DDX56Q9NY93 RNU6-765P-201ENST00000516916 99 ntBASIC0.86□□□□□ -2.27
DDX56Q9NY93 MIR1255B1-201ENST00000636325 63 ntBASIC0.86□□□□□ -2.27
DDX56Q9NY93 MIR3914-2-201ENST00000637339 95 ntBASIC0.86□□□□□ -2.27
DDX56Q9NY93 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
DDX56Q9NY93 RNY4P6-201ENST00000363667 96 ntBASIC0.85□□□□□ -2.27
DDX56Q9NY93 RNY1P2-201ENST00000364820 117 ntBASIC0.85□□□□□ -2.27
DDX56Q9NY93 RNA5SP247-201ENST00000411181 105 ntBASIC0.85□□□□□ -2.27
DDX56Q9NY93 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.85□□□□□ -2.27
DDX56Q9NY93 RNU7-48P-201ENST00000458875 63 ntBASIC0.85□□□□□ -2.27
DDX56Q9NY93 RNU6-1333P-201ENST00000516162 93 ntBASIC0.85□□□□□ -2.27
DDX56Q9NY93 MTND5P34-201ENST00000568888 325 ntBASIC0.85□□□□□ -2.27
DDX56Q9NY93 AL590095.2-201ENST00000604136 117 ntBASIC0.85□□□□□ -2.27
DDX56Q9NY93 Y_RNA.98-201ENST00000363109 102 ntBASIC0.84□□□□□ -2.27
DDX56Q9NY93 RNU4-58P-201ENST00000363192 141 ntBASIC0.84□□□□□ -2.27
DDX56Q9NY93 Y_RNA.127-201ENST00000363386 109 ntBASIC0.84□□□□□ -2.27
DDX56Q9NY93 Y_RNA.226-201ENST00000364337 114 ntBASIC0.84□□□□□ -2.27
DDX56Q9NY93 RNU6-521P-201ENST00000516663 105 ntBASIC0.84□□□□□ -2.27
DDX56Q9NY93 MIR18A-201ENST00000362310 71 ntBASIC0.83□□□□□ -2.28
DDX56Q9NY93 Y_RNA.191-201ENST00000363972 113 ntBASIC0.83□□□□□ -2.28
DDX56Q9NY93 Y_RNA.261-201ENST00000364631 102 ntBASIC0.83□□□□□ -2.28
DDX56Q9NY93 Y_RNA.328-201ENST00000365208 113 ntBASIC0.83□□□□□ -2.28
DDX56Q9NY93 Y_RNA.344-201ENST00000365381 112 ntBASIC0.83□□□□□ -2.28
DDX56Q9NY93 MIR1287-201ENST00000408492 90 ntBASIC0.83□□□□□ -2.28
DDX56Q9NY93 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.83□□□□□ -2.28
DDX56Q9NY93 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.83□□□□□ -2.28
DDX56Q9NY93 Y_RNA.697-201ENST00000516776 113 ntBASIC0.83□□□□□ -2.28
DDX56Q9NY93 MIR4698-201ENST00000577795 80 ntBASIC0.83□□□□□ -2.28
DDX56Q9NY93 RNU6-865P-201ENST00000364772 107 ntBASIC0.82□□□□□ -2.28
DDX56Q9NY93 MIR140-201ENST00000385282 100 ntBASIC0.82□□□□□ -2.28
DDX56Q9NY93 Y_RNA.649-201ENST00000459077 103 ntBASIC0.82□□□□□ -2.28
DDX56Q9NY93 AC018659.1-201ENST00000551083 169 ntBASIC0.82□□□□□ -2.28
DDX56Q9NY93 MIR3973-201ENST00000579824 107 ntBASIC0.82□□□□□ -2.28
DDX56Q9NY93 AL365222.1-201ENST00000614661 98 ntBASIC0.82□□□□□ -2.28
DDX56Q9NY93 AC132825.6-201ENST00000638861 357 ntBASIC0.82□□□□□ -2.28
DDX56Q9NY93 RNY1P8-201ENST00000383970 114 ntBASIC0.81□□□□□ -2.28
DDX56Q9NY93 Y_RNA.536-201ENST00000384621 113 ntBASIC0.81□□□□□ -2.28
DDX56Q9NY93 SNORA7.5-201ENST00000410672 110 ntBASIC0.81□□□□□ -2.28
DDX56Q9NY93 SNORD33.1-201ENST00000516213 88 ntBASIC0.81□□□□□ -2.28
DDX56Q9NY93 RNU6-469P-201ENST00000516253 101 ntBASIC0.81□□□□□ -2.28
DDX56Q9NY93 RNA5SP121-201ENST00000516537 101 ntBASIC0.81□□□□□ -2.28
DDX56Q9NY93 MIR4500-201ENST00000579472 76 ntBASIC0.81□□□□□ -2.28
DDX56Q9NY93 MIR376B-201ENST00000614515 100 ntBASIC0.81□□□□□ -2.28
DDX56Q9NY93 U6.95-201ENST00000636931 70 ntBASIC0.81□□□□□ -2.28
DDX56Q9NY93 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
DDX56Q9NY93 RNU6-429P-201ENST00000384582 108 ntBASIC0.8□□□□□ -2.28
DDX56Q9NY93 RNU6-291P-201ENST00000384720 107 ntBASIC0.8□□□□□ -2.28
DDX56Q9NY93 RNU6-535P-201ENST00000384722 107 ntBASIC0.8□□□□□ -2.28
DDX56Q9NY93 MIR548A1-201ENST00000385041 97 ntBASIC0.8□□□□□ -2.28
DDX56Q9NY93 RNU6-1194P-201ENST00000516208 104 ntBASIC0.8□□□□□ -2.28
DDX56Q9NY93 MIR4452-201ENST00000583004 71 ntBASIC0.8□□□□□ -2.28
DDX56Q9NY93 AP001362.1-201ENST00000625165 124 ntBASIC0.8□□□□□ -2.28
DDX56Q9NY93 MIR101-2-201ENST00000362195 79 ntBASIC0.79□□□□□ -2.28
DDX56Q9NY93 RNU4-67P-201ENST00000364569 141 ntBASIC0.79□□□□□ -2.28
DDX56Q9NY93 RNU1-93P-201ENST00000364704 169 ntBASIC0.79□□□□□ -2.28
DDX56Q9NY93 Y_RNA.362-201ENST00000365518 110 ntBASIC0.79□□□□□ -2.28
DDX56Q9NY93 MIR34C-201ENST00000384831 77 ntBASIC0.79□□□□□ -2.28
DDX56Q9NY93 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
DDX56Q9NY93 AC008267.6-201ENST00000441664 139 ntBASIC0.79□□□□□ -2.28
DDX56Q9NY93 AC007012.1-201ENST00000567192 175 ntBASIC0.79□□□□□ -2.28
DDX56Q9NY93 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.79□□□□□ -2.28
DDX56Q9NY93 uc_338.16-201ENST00000621804 95 ntBASIC0.79□□□□□ -2.28
DDX56Q9NY93 Y_RNA.32-201ENST00000362589 110 ntBASIC0.78□□□□□ -2.28
DDX56Q9NY93 RNU6-363P-201ENST00000362895 105 ntBASIC0.78□□□□□ -2.28
DDX56Q9NY93 Y_RNA.174-201ENST00000363781 105 ntBASIC0.78□□□□□ -2.28
DDX56Q9NY93 Y_RNA.224-201ENST00000364308 111 ntBASIC0.78□□□□□ -2.28
DDX56Q9NY93 SNORD114-22-201ENST00000365423 72 ntBASIC0.78□□□□□ -2.28
DDX56Q9NY93 MIR644A-201ENST00000385262 94 ntBASIC0.78□□□□□ -2.28
DDX56Q9NY93 MIR548A3-201ENST00000385297 97 ntBASIC0.78□□□□□ -2.28
DDX56Q9NY93 SNORA31.14-201ENST00000516728 116 ntBASIC0.78□□□□□ -2.28
DDX56Q9NY93 MIR3678-201ENST00000578455 94 ntBASIC0.78□□□□□ -2.28
DDX56Q9NY93 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
DDX56Q9NY93 MIR96-201ENST00000362288 78 ntBASIC0.77□□□□□ -2.29
DDX56Q9NY93 RNU6-1117P-201ENST00000384525 104 ntBASIC0.77□□□□□ -2.29
DDX56Q9NY93 RNU6-679P-201ENST00000391003 106 ntBASIC0.77□□□□□ -2.29
DDX56Q9NY93 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.77□□□□□ -2.29
DDX56Q9NY93 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
DDX56Q9NY93 MIR373-201ENST00000362273 69 ntBASIC0.76□□□□□ -2.29
DDX56Q9NY93 RNA5SP245-201ENST00000364239 121 ntBASIC0.76□□□□□ -2.29
DDX56Q9NY93 Y_RNA.353-201ENST00000365440 108 ntBASIC0.76□□□□□ -2.29
DDX56Q9NY93 Y_RNA.360-201ENST00000365512 102 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms