Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SNORA25.16-201ENST00000516741 121 ntBASIC0.62□□□□□ -2.31
NDE1Q9NXR1 RNU7-137P-201ENST00000516788 62 ntBASIC0.62□□□□□ -2.31
NDE1Q9NXR1 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.62□□□□□ -2.31
NDE1Q9NXR1 SNORD92-201ENST00000585078 85 ntBASIC0.62□□□□□ -2.31
NDE1Q9NXR1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.62□□□□□ -2.31
NDE1Q9NXR1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.62□□□□□ -2.31
NDE1Q9NXR1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
NDE1Q9NXR1 Y_RNA.30-201ENST00000362572 97 ntBASIC0.61□□□□□ -2.31
NDE1Q9NXR1 Y_RNA.42-201ENST00000362660 108 ntBASIC0.61□□□□□ -2.31
NDE1Q9NXR1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
NDE1Q9NXR1 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
NDE1Q9NXR1 Y_RNA.586-201ENST00000391146 98 ntBASIC0.61□□□□□ -2.31
NDE1Q9NXR1 AC133485.1-201ENST00000567176 124 ntBASIC0.61□□□□□ -2.31
NDE1Q9NXR1 AC138907.6-201ENST00000568401 126 ntBASIC0.61□□□□□ -2.31
NDE1Q9NXR1 MIR1273G-201ENST00000577677 100 ntBASIC0.61□□□□□ -2.31
NDE1Q9NXR1 MIR3612-201ENST00000579753 87 ntBASIC0.61□□□□□ -2.31
NDE1Q9NXR1 AL590095.2-201ENST00000604136 117 ntBASIC0.61□□□□□ -2.31
NDE1Q9NXR1 TUG1_4.1-201ENST00000619464 181 ntBASIC0.61□□□□□ -2.31
NDE1Q9NXR1 U6.109-201ENST00000636749 87 ntBASIC0.61□□□□□ -2.31
NDE1Q9NXR1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.6□□□□□ -2.31
NDE1Q9NXR1 RNA5SP133-201ENST00000363368 119 ntBASIC0.6□□□□□ -2.31
NDE1Q9NXR1 SNORA36.2-201ENST00000384004 127 ntBASIC0.6□□□□□ -2.31
NDE1Q9NXR1 RNU6-735P-201ENST00000410612 107 ntBASIC0.6□□□□□ -2.31
NDE1Q9NXR1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.6□□□□□ -2.31
NDE1Q9NXR1 RNU7-107P-201ENST00000459121 61 ntBASIC0.6□□□□□ -2.31
NDE1Q9NXR1 MIR4714-201ENST00000580728 77 ntBASIC0.6□□□□□ -2.31
NDE1Q9NXR1 RNU6-746P-201ENST00000384112 109 ntBASIC0.59□□□□□ -2.31
NDE1Q9NXR1 RNU6-616P-201ENST00000384353 107 ntBASIC0.59□□□□□ -2.31
NDE1Q9NXR1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
NDE1Q9NXR1 RNU6-1307P-201ENST00000391012 103 ntBASIC0.59□□□□□ -2.31
NDE1Q9NXR1 RNU7-6P-201ENST00000516845 62 ntBASIC0.59□□□□□ -2.31
NDE1Q9NXR1 RNU6-1234P-201ENST00000516877 103 ntBASIC0.59□□□□□ -2.31
NDE1Q9NXR1 DEFB131E-201ENST00000532329 154 ntBASIC0.59□□□□□ -2.31
NDE1Q9NXR1 MTND5P34-201ENST00000568888 325 ntBASIC0.59□□□□□ -2.31
NDE1Q9NXR1 AC090897.1-201ENST00000580909 226 ntBASIC0.59□□□□□ -2.31
NDE1Q9NXR1 MIR6082-201ENST00000613604 109 ntBASIC0.59□□□□□ -2.31
NDE1Q9NXR1 SNORD114-23-201ENST00000363536 72 ntBASIC0.58□□□□□ -2.32
NDE1Q9NXR1 Y_RNA.299-201ENST00000364973 94 ntBASIC0.58□□□□□ -2.32
NDE1Q9NXR1 Y_RNA.448-201ENST00000384185 108 ntBASIC0.58□□□□□ -2.32
NDE1Q9NXR1 Y_RNA.528-201ENST00000384575 108 ntBASIC0.58□□□□□ -2.32
NDE1Q9NXR1 MIR206-201ENST00000384872 86 ntBASIC0.58□□□□□ -2.32
NDE1Q9NXR1 RNU6-1321P-201ENST00000390905 107 ntBASIC0.58□□□□□ -2.32
NDE1Q9NXR1 SNORD77B-201ENST00000391112 67 ntBASIC0.58□□□□□ -2.32
NDE1Q9NXR1 Y_RNA.630-201ENST00000411370 108 ntBASIC0.58□□□□□ -2.32
NDE1Q9NXR1 RNU6-772P-201ENST00000516042 105 ntBASIC0.58□□□□□ -2.32
NDE1Q9NXR1 RNU6-531P-201ENST00000516694 104 ntBASIC0.58□□□□□ -2.32
NDE1Q9NXR1 AC138749.4-201ENST00000563970 127 ntBASIC0.58□□□□□ -2.32
NDE1Q9NXR1 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
NDE1Q9NXR1 MIR6835-201ENST00000621552 64 ntBASIC0.58□□□□□ -2.32
NDE1Q9NXR1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
NDE1Q9NXR1 SNORD58C-201ENST00000365223 64 ntBASIC0.57□□□□□ -2.32
NDE1Q9NXR1 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
NDE1Q9NXR1 AC002350.1-201ENST00000490759 375 ntBASIC0.57□□□□□ -2.32
NDE1Q9NXR1 RNU6-448P-201ENST00000517052 107 ntBASIC0.57□□□□□ -2.32
NDE1Q9NXR1 AC087741.2-201ENST00000619415 172 ntBASIC0.57□□□□□ -2.32
NDE1Q9NXR1 MIR6513-201ENST00000621188 64 ntBASIC0.57□□□□□ -2.32
NDE1Q9NXR1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
NDE1Q9NXR1 MIR18A-201ENST00000362310 71 ntBASIC0.56□□□□□ -2.32
NDE1Q9NXR1 SNORD114-10-201ENST00000363409 72 ntBASIC0.56□□□□□ -2.32
NDE1Q9NXR1 MIR548M-201ENST00000408260 86 ntBASIC0.56□□□□□ -2.32
NDE1Q9NXR1 SUMO1P3-201ENST00000439961 304 ntBASIC0.56□□□□□ -2.32
NDE1Q9NXR1 MIR3163-201ENST00000581592 73 ntBASIC0.56□□□□□ -2.32
NDE1Q9NXR1 Y_RNA.773-201ENST00000607168 90 ntBASIC0.56□□□□□ -2.32
NDE1Q9NXR1 AC025166.1-201ENST00000612411 163 ntBASIC0.56□□□□□ -2.32
NDE1Q9NXR1 Y_RNA.198-201ENST00000364013 98 ntBASIC0.55□□□□□ -2.32
NDE1Q9NXR1 Y_RNA.213-201ENST00000364178 111 ntBASIC0.55□□□□□ -2.32
NDE1Q9NXR1 Y_RNA.218-201ENST00000364218 104 ntBASIC0.55□□□□□ -2.32
NDE1Q9NXR1 MIR508-201ENST00000384857 115 ntBASIC0.55□□□□□ -2.32
NDE1Q9NXR1 RNA5SP136-201ENST00000410906 107 ntBASIC0.55□□□□□ -2.32
NDE1Q9NXR1 COX6CP6-201ENST00000490840 228 ntBASIC0.55□□□□□ -2.32
NDE1Q9NXR1 Y_RNA.697-201ENST00000516776 113 ntBASIC0.55□□□□□ -2.32
NDE1Q9NXR1 MIR1255B1-201ENST00000636325 63 ntBASIC0.55□□□□□ -2.32
NDE1Q9NXR1 MTND5P18-201ENST00000445624 1801 ntBASIC0.54□□□□□ -2.32
NDE1Q9NXR1 Y_RNA.32-201ENST00000362589 110 ntBASIC0.54□□□□□ -2.32
NDE1Q9NXR1 Y_RNA.115-201ENST00000363272 98 ntBASIC0.54□□□□□ -2.32
NDE1Q9NXR1 Y_RNA.119-201ENST00000363301 96 ntBASIC0.54□□□□□ -2.32
NDE1Q9NXR1 RNU6-704P-201ENST00000364162 103 ntBASIC0.54□□□□□ -2.32
NDE1Q9NXR1 MIR539-201ENST00000365690 78 ntBASIC0.54□□□□□ -2.32
NDE1Q9NXR1 RNU6-291P-201ENST00000384720 107 ntBASIC0.54□□□□□ -2.32
NDE1Q9NXR1 MIRLET7F2-201ENST00000385277 83 ntBASIC0.54□□□□□ -2.32
NDE1Q9NXR1 SNORD100-201ENST00000408573 76 ntBASIC0.54□□□□□ -2.32
NDE1Q9NXR1 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.54□□□□□ -2.32
NDE1Q9NXR1 RNU7-2P-201ENST00000516096 62 ntBASIC0.54□□□□□ -2.32
NDE1Q9NXR1 RNU6-1194P-201ENST00000516208 104 ntBASIC0.54□□□□□ -2.32
NDE1Q9NXR1 AC010487.4-201ENST00000637027 61 ntBASIC0.54□□□□□ -2.32
NDE1Q9NXR1 MIR924-201ENST00000638017 53 ntBASIC0.54□□□□□ -2.32
NDE1Q9NXR1 RNA5SP117-201ENST00000365294 118 ntBASIC0.53□□□□□ -2.32
NDE1Q9NXR1 RNU6-110P-201ENST00000384508 104 ntBASIC0.53□□□□□ -2.32
NDE1Q9NXR1 MIR644A-201ENST00000385262 94 ntBASIC0.53□□□□□ -2.32
NDE1Q9NXR1 RNU6-679P-201ENST00000391003 106 ntBASIC0.53□□□□□ -2.32
NDE1Q9NXR1 MIR936-201ENST00000401264 98 ntBASIC0.53□□□□□ -2.32
NDE1Q9NXR1 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
NDE1Q9NXR1 RNU7-48P-201ENST00000458875 63 ntBASIC0.53□□□□□ -2.32
NDE1Q9NXR1 RNU6-765P-201ENST00000516916 99 ntBASIC0.53□□□□□ -2.32
NDE1Q9NXR1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
NDE1Q9NXR1 AL157777.2-201ENST00000258070 137 ntBASIC0.52□□□□□ -2.33
NDE1Q9NXR1 Y_RNA.71-201ENST00000362892 104 ntBASIC0.52□□□□□ -2.33
NDE1Q9NXR1 RNU4-58P-201ENST00000363192 141 ntBASIC0.52□□□□□ -2.33
NDE1Q9NXR1 SNORA63.5-201ENST00000363548 123 ntBASIC0.52□□□□□ -2.33
NDE1Q9NXR1 RNA5SP457-201ENST00000363657 124 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms