Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 Y_RNA.188-201ENST00000363952 111 ntBASIC0.11□□□□□ -2.39
EXOSC3Q9NQT5 RNY1P2-201ENST00000364820 117 ntBASIC0.11□□□□□ -2.39
EXOSC3Q9NQT5 RNU6-716P-201ENST00000365621 103 ntBASIC0.11□□□□□ -2.39
EXOSC3Q9NQT5 MIR598-201ENST00000384868 97 ntBASIC0.11□□□□□ -2.39
EXOSC3Q9NQT5 Y_RNA.690-201ENST00000516603 95 ntBASIC0.11□□□□□ -2.39
EXOSC3Q9NQT5 RNU7-121P-201ENST00000516604 62 ntBASIC0.11□□□□□ -2.39
EXOSC3Q9NQT5 RNU6-861P-201ENST00000516745 106 ntBASIC0.11□□□□□ -2.39
EXOSC3Q9NQT5 MIR4752-201ENST00000579672 72 ntBASIC0.11□□□□□ -2.39
EXOSC3Q9NQT5 DNAJC19P2-201ENST00000593340 302 ntBASIC0.11□□□□□ -2.39
EXOSC3Q9NQT5 AC098479.1-201ENST00000609225 154 ntBASIC0.11□□□□□ -2.39
EXOSC3Q9NQT5 MIR924-201ENST00000638017 53 ntBASIC0.11□□□□□ -2.39
EXOSC3Q9NQT5 SNORD115-24-201ENST00000363528 82 ntBASIC0.1□□□□□ -2.39
EXOSC3Q9NQT5 Y_RNA.298-201ENST00000364960 107 ntBASIC0.1□□□□□ -2.39
EXOSC3Q9NQT5 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
EXOSC3Q9NQT5 RNU4-69P-201ENST00000410677 143 ntBASIC0.1□□□□□ -2.39
EXOSC3Q9NQT5 snoU13.18-201ENST00000459483 104 ntBASIC0.1□□□□□ -2.39
EXOSC3Q9NQT5 RNU7-129P-201ENST00000516128 62 ntBASIC0.1□□□□□ -2.39
EXOSC3Q9NQT5 RNU6-388P-201ENST00000517012 105 ntBASIC0.1□□□□□ -2.39
EXOSC3Q9NQT5 RNU6-389P-201ENST00000517048 105 ntBASIC0.1□□□□□ -2.39
EXOSC3Q9NQT5 RNU6-1318P-201ENST00000365389 103 ntBASIC0.09□□□□□ -2.4
EXOSC3Q9NQT5 RNU6-1321P-201ENST00000390905 107 ntBASIC0.09□□□□□ -2.4
EXOSC3Q9NQT5 PCNPP3-201ENST00000393579 471 ntBASIC0.09□□□□□ -2.4
EXOSC3Q9NQT5 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.09□□□□□ -2.4
EXOSC3Q9NQT5 MIR4514-201ENST00000581410 57 ntBASIC0.09□□□□□ -2.4
EXOSC3Q9NQT5 MIR4315-1-201ENST00000636800 73 ntBASIC0.09□□□□□ -2.4
EXOSC3Q9NQT5 MIR4315-2-201ENST00000640925 73 ntBASIC0.09□□□□□ -2.4
EXOSC3Q9NQT5 SNORA9.1-201ENST00000362412 131 ntBASIC0.08□□□□□ -2.4
EXOSC3Q9NQT5 Y_RNA.56-201ENST00000362798 112 ntBASIC0.08□□□□□ -2.4
EXOSC3Q9NQT5 Y_RNA.240-201ENST00000364469 95 ntBASIC0.08□□□□□ -2.4
EXOSC3Q9NQT5 Y_RNA.251-201ENST00000364551 99 ntBASIC0.08□□□□□ -2.4
EXOSC3Q9NQT5 AC108059.2-201ENST00000434626 151 ntBASIC0.08□□□□□ -2.4
EXOSC3Q9NQT5 RNU6-138P-201ENST00000515952 107 ntBASIC0.08□□□□□ -2.4
EXOSC3Q9NQT5 AC108081.1-201ENST00000604358 221 ntBASIC0.08□□□□□ -2.4
EXOSC3Q9NQT5 AC010487.4-201ENST00000637027 61 ntBASIC0.08□□□□□ -2.4
EXOSC3Q9NQT5 RNU6-1126P-201ENST00000384002 107 ntBASIC0.07□□□□□ -2.4
EXOSC3Q9NQT5 Y_RNA.448-201ENST00000384185 108 ntBASIC0.07□□□□□ -2.4
EXOSC3Q9NQT5 MIR206-201ENST00000384872 86 ntBASIC0.07□□□□□ -2.4
EXOSC3Q9NQT5 MIR760-201ENST00000390220 80 ntBASIC0.07□□□□□ -2.4
EXOSC3Q9NQT5 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.07□□□□□ -2.4
EXOSC3Q9NQT5 RNY4P20-201ENST00000516678 93 ntBASIC0.07□□□□□ -2.4
EXOSC3Q9NQT5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.06□□□□□ -2.4
EXOSC3Q9NQT5 RNU6-682P-201ENST00000363843 106 ntBASIC0.06□□□□□ -2.4
EXOSC3Q9NQT5 RNU6-200P-201ENST00000364743 107 ntBASIC0.06□□□□□ -2.4
EXOSC3Q9NQT5 Y_RNA.299-201ENST00000364973 94 ntBASIC0.06□□□□□ -2.4
EXOSC3Q9NQT5 RNU4-11P-201ENST00000365287 132 ntBASIC0.06□□□□□ -2.4
EXOSC3Q9NQT5 RNU6-429P-201ENST00000384582 108 ntBASIC0.06□□□□□ -2.4
EXOSC3Q9NQT5 Y_RNA.552-201ENST00000384665 112 ntBASIC0.06□□□□□ -2.4
EXOSC3Q9NQT5 RNU6-1104P-201ENST00000384723 104 ntBASIC0.06□□□□□ -2.4
EXOSC3Q9NQT5 RNU6-1307P-201ENST00000391012 103 ntBASIC0.06□□□□□ -2.4
EXOSC3Q9NQT5 SNORD77B-201ENST00000391112 67 ntBASIC0.06□□□□□ -2.4
EXOSC3Q9NQT5 AL603914.1-201ENST00000401964 204 ntBASIC0.06□□□□□ -2.4
EXOSC3Q9NQT5 RNU7-120P-201ENST00000459334 63 ntBASIC0.06□□□□□ -2.4
EXOSC3Q9NQT5 Y_RNA.662-201ENST00000516028 97 ntBASIC0.06□□□□□ -2.4
EXOSC3Q9NQT5 MIR4500-201ENST00000579472 76 ntBASIC0.06□□□□□ -2.4
EXOSC3Q9NQT5 RNA5SP214-201ENST00000363378 118 ntBASIC0.05□□□□□ -2.4
EXOSC3Q9NQT5 Y_RNA.272-201ENST00000364696 102 ntBASIC0.05□□□□□ -2.4
EXOSC3Q9NQT5 Y_RNA.355-201ENST00000365462 98 ntBASIC0.05□□□□□ -2.4
EXOSC3Q9NQT5 Y_RNA.401-201ENST00000383965 117 ntBASIC0.05□□□□□ -2.4
EXOSC3Q9NQT5 MIR548L-201ENST00000408303 86 ntBASIC0.05□□□□□ -2.4
EXOSC3Q9NQT5 AC244505.6-201ENST00000452829 130 ntBASIC0.05□□□□□ -2.4
EXOSC3Q9NQT5 RNU7-48P-201ENST00000458875 63 ntBASIC0.05□□□□□ -2.4
EXOSC3Q9NQT5 RNU7-104P-201ENST00000459398 79 ntBASIC0.05□□□□□ -2.4
EXOSC3Q9NQT5 AC074198.2-201ENST00000508153 258 ntBASIC0.05□□□□□ -2.4
EXOSC3Q9NQT5 RNU6-1232P-201ENST00000516299 86 ntBASIC0.05□□□□□ -2.4
EXOSC3Q9NQT5 RNU7-161P-201ENST00000517289 62 ntBASIC0.05□□□□□ -2.4
EXOSC3Q9NQT5 AC138869.1-201ENST00000568623 124 ntBASIC0.05□□□□□ -2.4
EXOSC3Q9NQT5 MIR548H5-201ENST00000580314 60 ntBASIC0.05□□□□□ -2.4
EXOSC3Q9NQT5 AC104408.1-201ENST00000605241 170 ntBASIC0.05□□□□□ -2.4
EXOSC3Q9NQT5 AL137067.1-201ENST00000615933 120 ntBASIC0.05□□□□□ -2.4
EXOSC3Q9NQT5 Y_RNA.508-201ENST00000384502 114 ntBASIC0.04□□□□□ -2.4
EXOSC3Q9NQT5 MIR643-201ENST00000385267 97 ntBASIC0.04□□□□□ -2.4
EXOSC3Q9NQT5 RNU6-127P-201ENST00000390897 107 ntBASIC0.04□□□□□ -2.4
EXOSC3Q9NQT5 AC023932.2-201ENST00000603176 175 ntBASIC0.04□□□□□ -2.4
EXOSC3Q9NQT5 PVT1_3.1-201ENST00000620853 95 ntBASIC0.04□□□□□ -2.4
EXOSC3Q9NQT5 RNU6-726P-201ENST00000364680 107 ntBASIC0.03□□□□□ -2.4
EXOSC3Q9NQT5 Y_RNA.441-201ENST00000384123 112 ntBASIC0.03□□□□□ -2.4
EXOSC3Q9NQT5 Y_RNA.476-201ENST00000384347 108 ntBASIC0.03□□□□□ -2.4
EXOSC3Q9NQT5 RNU6-616P-201ENST00000384353 107 ntBASIC0.03□□□□□ -2.4
EXOSC3Q9NQT5 RNU1-29P-201ENST00000606574 126 ntBASIC0.03□□□□□ -2.4
EXOSC3Q9NQT5 MIR499B-201ENST00000636498 73 ntBASIC0.03□□□□□ -2.4
EXOSC3Q9NQT5 Y_RNA.29-201ENST00000362570 113 ntBASIC0.02□□□□□ -2.41
EXOSC3Q9NQT5 Y_RNA.98-201ENST00000363109 102 ntBASIC0.02□□□□□ -2.41
EXOSC3Q9NQT5 SNORA42.1-201ENST00000363515 137 ntBASIC0.02□□□□□ -2.41
EXOSC3Q9NQT5 RNU6-151P-201ENST00000364158 107 ntBASIC0.02□□□□□ -2.41
EXOSC3Q9NQT5 Y_RNA.221-201ENST00000364248 96 ntBASIC0.02□□□□□ -2.41
EXOSC3Q9NQT5 SNORD114-9-201ENST00000364370 72 ntBASIC0.02□□□□□ -2.41
EXOSC3Q9NQT5 RNA5SP128-201ENST00000365305 116 ntBASIC0.02□□□□□ -2.41
EXOSC3Q9NQT5 SNORA2A-201ENST00000383885 135 ntBASIC0.02□□□□□ -2.41
EXOSC3Q9NQT5 MIR635-201ENST00000384830 98 ntBASIC0.02□□□□□ -2.41
EXOSC3Q9NQT5 RNU6-460P-201ENST00000391158 108 ntBASIC0.02□□□□□ -2.41
EXOSC3Q9NQT5 RNU6-1135P-201ENST00000411083 103 ntBASIC0.02□□□□□ -2.41
EXOSC3Q9NQT5 BX276092.1-201ENST00000427368 251 ntBASIC0.02□□□□□ -2.41
EXOSC3Q9NQT5 RPL39P34-201ENST00000477141 156 ntBASIC0.02□□□□□ -2.41
EXOSC3Q9NQT5 TRAJ51-201ENST00000504127 63 ntBASIC0.02□□□□□ -2.41
EXOSC3Q9NQT5 RNU7-2P-201ENST00000516096 62 ntBASIC0.02□□□□□ -2.41
EXOSC3Q9NQT5 SNORD114-5-201ENST00000362928 70 ntBASIC0.01□□□□□ -2.41
EXOSC3Q9NQT5 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
EXOSC3Q9NQT5 RNU4-67P-201ENST00000364569 141 ntBASIC0.01□□□□□ -2.41
EXOSC3Q9NQT5 RNU7-197P-201ENST00000458836 62 ntBASIC0.01□□□□□ -2.41
EXOSC3Q9NQT5 SNORA81.3-201ENST00000517283 198 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms