Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.47□□□□□ -2.01
RTN4Q9NQC3 MIR449A-201ENST00000362113 91 ntBASIC2.46□□□□□ -2.02
RTN4Q9NQC3 SNORD58A-201ENST00000383875 65 ntBASIC2.46□□□□□ -2.02
RTN4Q9NQC3 MIR635-201ENST00000384830 98 ntBASIC2.46□□□□□ -2.02
RTN4Q9NQC3 SUMO2P12-201ENST00000405924 140 ntBASIC2.46□□□□□ -2.02
RTN4Q9NQC3 RNA5SP508-201ENST00000411327 119 ntBASIC2.46□□□□□ -2.02
RTN4Q9NQC3 RNU1-98P-201ENST00000458992 160 ntBASIC2.46□□□□□ -2.02
RTN4Q9NQC3 Y_RNA.697-201ENST00000516776 113 ntBASIC2.46□□□□□ -2.02
RTN4Q9NQC3 MIR4435-1-201ENST00000582552 80 ntBASIC2.46□□□□□ -2.02
RTN4Q9NQC3 MIR548Z-201ENST00000584743 97 ntBASIC2.46□□□□□ -2.02
RTN4Q9NQC3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RTN4Q9NQC3 RNU6-1131P-201ENST00000364955 107 ntBASIC2.45□□□□□ -2.02
RTN4Q9NQC3 SNORA67.4-201ENST00000384688 142 ntBASIC2.45□□□□□ -2.02
RTN4Q9NQC3 MIR4672-201ENST00000583126 81 ntBASIC2.45□□□□□ -2.02
RTN4Q9NQC3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RTN4Q9NQC3 MIR520F-201ENST00000384824 87 ntBASIC2.44□□□□□ -2.02
RTN4Q9NQC3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.44□□□□□ -2.02
RTN4Q9NQC3 MIR3124-201ENST00000582636 67 ntBASIC2.44□□□□□ -2.02
RTN4Q9NQC3 AC013244.2-201ENST00000603396 103 ntBASIC2.44□□□□□ -2.02
RTN4Q9NQC3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RTN4Q9NQC3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RTN4Q9NQC3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
RTN4Q9NQC3 RNU1-124P-201ENST00000363861 145 ntBASIC2.43□□□□□ -2.02
RTN4Q9NQC3 RNA5SP24-201ENST00000516478 95 ntBASIC2.43□□□□□ -2.02
RTN4Q9NQC3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.43□□□□□ -2.02
RTN4Q9NQC3 Y_RNA.290-201ENST00000364879 114 ntBASIC2.42□□□□□ -2.02
RTN4Q9NQC3 SNORD114-24-201ENST00000365029 72 ntBASIC2.42□□□□□ -2.02
RTN4Q9NQC3 RNU7-56P-201ENST00000458744 62 ntBASIC2.42□□□□□ -2.02
RTN4Q9NQC3 RNU7-102P-201ENST00000458948 62 ntBASIC2.42□□□□□ -2.02
RTN4Q9NQC3 RNA5SP363-201ENST00000365072 115 ntBASIC2.41□□□□□ -2.02
RTN4Q9NQC3 MIR618-201ENST00000385287 98 ntBASIC2.41□□□□□ -2.02
RTN4Q9NQC3 MIR942-201ENST00000401111 86 ntBASIC2.41□□□□□ -2.02
RTN4Q9NQC3 SNORD100-201ENST00000408573 76 ntBASIC2.41□□□□□ -2.02
RTN4Q9NQC3 AC015818.7-201ENST00000428754 109 ntBASIC2.41□□□□□ -2.02
RTN4Q9NQC3 AC087499.7-201ENST00000441958 109 ntBASIC2.41□□□□□ -2.02
RTN4Q9NQC3 AC025627.3-201ENST00000582078 182 ntBASIC2.41□□□□□ -2.02
RTN4Q9NQC3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RTN4Q9NQC3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
RTN4Q9NQC3 MIR26B-201ENST00000362251 77 ntBASIC2.4□□□□□ -2.03
RTN4Q9NQC3 RNU6-369P-201ENST00000362515 102 ntBASIC2.4□□□□□ -2.03
RTN4Q9NQC3 RNU6-294P-201ENST00000364999 102 ntBASIC2.4□□□□□ -2.03
RTN4Q9NQC3 MIR488-201ENST00000365739 83 ntBASIC2.4□□□□□ -2.03
RTN4Q9NQC3 Y_RNA.558-201ENST00000384685 113 ntBASIC2.4□□□□□ -2.03
RTN4Q9NQC3 MIR181B2-201ENST00000385004 89 ntBASIC2.4□□□□□ -2.03
RTN4Q9NQC3 RNU6-844P-201ENST00000517175 102 ntBASIC2.4□□□□□ -2.03
RTN4Q9NQC3 AL645939.4-201ENST00000604495 135 ntBASIC2.4□□□□□ -2.03
RTN4Q9NQC3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RTN4Q9NQC3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RTN4Q9NQC3 RNU6-1254P-201ENST00000391266 104 ntBASIC2.39□□□□□ -2.03
RTN4Q9NQC3 MIR3122-201ENST00000577243 73 ntBASIC2.39□□□□□ -2.03
RTN4Q9NQC3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
RTN4Q9NQC3 RNU6-243P-201ENST00000391140 107 ntBASIC2.38□□□□□ -2.03
RTN4Q9NQC3 RNA5SP200-201ENST00000516360 103 ntBASIC2.38□□□□□ -2.03
RTN4Q9NQC3 AC138907.6-201ENST00000568401 126 ntBASIC2.38□□□□□ -2.03
RTN4Q9NQC3 AC138869.1-201ENST00000568623 124 ntBASIC2.38□□□□□ -2.03
RTN4Q9NQC3 Y_RNA.536-201ENST00000384621 113 ntBASIC2.37□□□□□ -2.03
RTN4Q9NQC3 MIR519A1-201ENST00000385257 85 ntBASIC2.37□□□□□ -2.03
RTN4Q9NQC3 BTF3P4-201ENST00000418852 495 ntBASIC2.37□□□□□ -2.03
RTN4Q9NQC3 RNU1-41P-201ENST00000516161 162 ntBASIC2.37□□□□□ -2.03
RTN4Q9NQC3 RNU1-48P-201ENST00000516400 162 ntBASIC2.37□□□□□ -2.03
RTN4Q9NQC3 RNU6-448P-201ENST00000517052 107 ntBASIC2.37□□□□□ -2.03
RTN4Q9NQC3 RNA5SP404-201ENST00000517118 132 ntBASIC2.37□□□□□ -2.03
RTN4Q9NQC3 RNU4-82P-201ENST00000362443 140 ntBASIC2.36□□□□□ -2.03
RTN4Q9NQC3 Y_RNA.174-201ENST00000363781 105 ntBASIC2.36□□□□□ -2.03
RTN4Q9NQC3 AL512598.1-201ENST00000610158 273 ntBASIC2.36□□□□□ -2.03
RTN4Q9NQC3 RMST_2.1-201ENST00000617263 136 ntBASIC2.36□□□□□ -2.03
RTN4Q9NQC3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RTN4Q9NQC3 RNU6-162P-201ENST00000516228 103 ntBASIC2.35□□□□□ -2.03
RTN4Q9NQC3 RNA5SP289-201ENST00000362332 137 ntBASIC2.34□□□□□ -2.03
RTN4Q9NQC3 SNORD89-201ENST00000390981 114 ntBASIC2.34□□□□□ -2.03
RTN4Q9NQC3 RN7SL429P-201ENST00000479090 223 ntBASIC2.34□□□□□ -2.03
RTN4Q9NQC3 RN7SL489P-201ENST00000486185 223 ntBASIC2.34□□□□□ -2.03
RTN4Q9NQC3 RN7SL327P-201ENST00000488659 223 ntBASIC2.34□□□□□ -2.03
RTN4Q9NQC3 AL513043.2-201ENST00000573941 143 ntBASIC2.34□□□□□ -2.03
RTN4Q9NQC3 RN7SL853P-201ENST00000617250 223 ntBASIC2.34□□□□□ -2.03
RTN4Q9NQC3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
RTN4Q9NQC3 RNU6-535P-201ENST00000384722 107 ntBASIC2.33□□□□□ -2.04
RTN4Q9NQC3 RNU6-997P-201ENST00000384725 107 ntBASIC2.33□□□□□ -2.04
RTN4Q9NQC3 SNORD63B-201ENST00000411005 70 ntBASIC2.33□□□□□ -2.04
RTN4Q9NQC3 AC026421.1-201ENST00000519101 163 ntBASIC2.33□□□□□ -2.04
RTN4Q9NQC3 AC104984.5-201ENST00000586878 94 ntBASIC2.33□□□□□ -2.04
RTN4Q9NQC3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RTN4Q9NQC3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RTN4Q9NQC3 SNORD105-201ENST00000386910 85 ntBASIC2.32□□□□□ -2.04
RTN4Q9NQC3 MIR6715A-201ENST00000615929 79 ntBASIC2.32□□□□□ -2.04
RTN4Q9NQC3 RNU6-49P-201ENST00000384256 107 ntBASIC2.31□□□□□ -2.04
RTN4Q9NQC3 SNORD116-22-201ENST00000384430 92 ntBASIC2.31□□□□□ -2.04
RTN4Q9NQC3 MIR6132-201ENST00000622083 109 ntBASIC2.31□□□□□ -2.04
RTN4Q9NQC3 RNU6-1134P-201ENST00000365156 101 ntBASIC2.3□□□□□ -2.04
RTN4Q9NQC3 AC092628.1-201ENST00000436250 252 ntBASIC2.3□□□□□ -2.04
RTN4Q9NQC3 AC097635.1-201ENST00000450678 155 ntBASIC2.3□□□□□ -2.04
RTN4Q9NQC3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RTN4Q9NQC3 MIR520H-201ENST00000385126 88 ntBASIC2.29□□□□□ -2.04
RTN4Q9NQC3 RNU6-135P-201ENST00000516769 101 ntBASIC2.29□□□□□ -2.04
RTN4Q9NQC3 AL157834.3-201ENST00000615543 103 ntBASIC2.29□□□□□ -2.04
RTN4Q9NQC3 AC025521.1-201ENST00000621624 286 ntBASIC2.29□□□□□ -2.04
RTN4Q9NQC3 RNU6-939P-201ENST00000384634 107 ntBASIC2.28□□□□□ -2.04
RTN4Q9NQC3 Y_RNA.648-201ENST00000459455 110 ntBASIC2.28□□□□□ -2.04
RTN4Q9NQC3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.28□□□□□ -2.04
RTN4Q9NQC3 RNY1P7-201ENST00000384743 110 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms