Protein–RNA interactions for Protein: Q9NP99

TREM1, Triggering receptor expressed on myeloid cells 1, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1Q9NP99 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.46□□□□□ -2.64
TREM1Q9NP99 RNU6-226P-201ENST00000363778 107 ntBASIC-1.46□□□□□ -2.64
TREM1Q9NP99 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.46□□□□□ -2.64
TREM1Q9NP99 SNORA32-201ENST00000384072 121 ntBASIC-1.46□□□□□ -2.64
TREM1Q9NP99 RNU6-571P-201ENST00000384128 107 ntBASIC-1.46□□□□□ -2.64
TREM1Q9NP99 MIR8485-201ENST00000401372 91 ntBASIC-1.46□□□□□ -2.64
TREM1Q9NP99 SERF1AP1-201ENST00000514575 187 ntBASIC-1.46□□□□□ -2.64
TREM1Q9NP99 RNA5SP476-201ENST00000516613 103 ntBASIC-1.46□□□□□ -2.64
TREM1Q9NP99 AL365205.2-201ENST00000594586 68 ntBASIC-1.46□□□□□ -2.64
TREM1Q9NP99 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.46□□□□□ -2.64
TREM1Q9NP99 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.47□□□□□ -2.64
TREM1Q9NP99 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.47□□□□□ -2.64
TREM1Q9NP99 RNU4-10P-201ENST00000364383 140 ntBASIC-1.47□□□□□ -2.64
TREM1Q9NP99 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.47□□□□□ -2.64
TREM1Q9NP99 MIR1277-201ENST00000408536 78 ntBASIC-1.47□□□□□ -2.64
TREM1Q9NP99 AL353813.1-201ENST00000440700 253 ntBASIC-1.47□□□□□ -2.64
TREM1Q9NP99 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.47□□□□□ -2.64
TREM1Q9NP99 HSPE1P25-201ENST00000455484 251 ntBASIC-1.47□□□□□ -2.64
TREM1Q9NP99 RNU7-113P-201ENST00000459273 62 ntBASIC-1.47□□□□□ -2.64
TREM1Q9NP99 AC107027.2-201ENST00000512197 115 ntBASIC-1.47□□□□□ -2.64
TREM1Q9NP99 MIR6129-201ENST00000616087 109 ntBASIC-1.47□□□□□ -2.64
TREM1Q9NP99 AC112487.2-201ENST00000637950 304 ntBASIC-1.47□□□□□ -2.64
TREM1Q9NP99 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.48□□□□□ -2.65
TREM1Q9NP99 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.48□□□□□ -2.65
TREM1Q9NP99 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.48□□□□□ -2.65
TREM1Q9NP99 SNORD115-20-201ENST00000365099 82 ntBASIC-1.48□□□□□ -2.65
TREM1Q9NP99 RNU7-134P-201ENST00000458997 64 ntBASIC-1.48□□□□□ -2.65
TREM1Q9NP99 SNORA20.3-201ENST00000516880 132 ntBASIC-1.48□□□□□ -2.65
TREM1Q9NP99 AC007012.1-201ENST00000567192 175 ntBASIC-1.48□□□□□ -2.65
TREM1Q9NP99 AC006504.6-201ENST00000590142 199 ntBASIC-1.48□□□□□ -2.65
TREM1Q9NP99 MIR1246-201ENST00000636535 73 ntBASIC-1.48□□□□□ -2.65
TREM1Q9NP99 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.49□□□□□ -2.65
TREM1Q9NP99 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.49□□□□□ -2.65
TREM1Q9NP99 MIR548I2-201ENST00000408348 149 ntBASIC-1.49□□□□□ -2.65
TREM1Q9NP99 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.49□□□□□ -2.65
TREM1Q9NP99 AC097510.1-201ENST00000510945 133 ntBASIC-1.49□□□□□ -2.65
TREM1Q9NP99 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.5□□□□□ -2.65
TREM1Q9NP99 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.5□□□□□ -2.65
TREM1Q9NP99 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.5□□□□□ -2.65
TREM1Q9NP99 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.5□□□□□ -2.65
TREM1Q9NP99 RNU7-106P-201ENST00000459514 67 ntBASIC-1.5□□□□□ -2.65
TREM1Q9NP99 SNORD18.2-201ENST00000459604 70 ntBASIC-1.5□□□□□ -2.65
TREM1Q9NP99 RNU6-287P-201ENST00000516230 98 ntBASIC-1.5□□□□□ -2.65
TREM1Q9NP99 AL008718.3-201ENST00000610217 321 ntBASIC-1.5□□□□□ -2.65
TREM1Q9NP99 AL606534.2-204ENST00000635008 178 ntBASIC-1.5□□□□□ -2.65
TREM1Q9NP99 MIR1285-2-201ENST00000408311 88 ntBASIC-1.51□□□□□ -2.65
TREM1Q9NP99 RNA5SP144-201ENST00000410846 116 ntBASIC-1.51□□□□□ -2.65
TREM1Q9NP99 RNU6-130P-201ENST00000411112 103 ntBASIC-1.51□□□□□ -2.65
TREM1Q9NP99 HAR1A.1-201ENST00000459583 118 ntBASIC-1.51□□□□□ -2.65
TREM1Q9NP99 RNU6-559P-201ENST00000516151 98 ntBASIC-1.51□□□□□ -2.65
TREM1Q9NP99 RNU6-358P-201ENST00000516564 75 ntBASIC-1.51□□□□□ -2.65
TREM1Q9NP99 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.51□□□□□ -2.65
TREM1Q9NP99 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.51□□□□□ -2.65
TREM1Q9NP99 RNU6-845P-201ENST00000362578 103 ntBASIC-1.52□□□□□ -2.65
TREM1Q9NP99 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.52□□□□□ -2.65
TREM1Q9NP99 MIR582-201ENST00000365731 98 ntBASIC-1.52□□□□□ -2.65
TREM1Q9NP99 RNU6-102P-201ENST00000384485 104 ntBASIC-1.52□□□□□ -2.65
TREM1Q9NP99 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.52□□□□□ -2.65
TREM1Q9NP99 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.52□□□□□ -2.65
TREM1Q9NP99 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.52□□□□□ -2.65
TREM1Q9NP99 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.52□□□□□ -2.65
TREM1Q9NP99 MIR376A1-201ENST00000616574 68 ntBASIC-1.52□□□□□ -2.65
TREM1Q9NP99 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.53□□□□□ -2.65
TREM1Q9NP99 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.53□□□□□ -2.65
TREM1Q9NP99 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.53□□□□□ -2.65
TREM1Q9NP99 SNORD114-17-201ENST00000364699 75 ntBASIC-1.53□□□□□ -2.65
TREM1Q9NP99 RNU1-115P-201ENST00000365329 160 ntBASIC-1.53□□□□□ -2.65
TREM1Q9NP99 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.53□□□□□ -2.65
TREM1Q9NP99 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.53□□□□□ -2.65
TREM1Q9NP99 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.53□□□□□ -2.65
TREM1Q9NP99 AL442663.2-201ENST00000554385 511 ntBASIC-1.53□□□□□ -2.65
TREM1Q9NP99 AC113139.1-201ENST00000605049 239 ntBASIC-1.53□□□□□ -2.65
TREM1Q9NP99 RNU6-170P-201ENST00000362832 104 ntBASIC-1.54□□□□□ -2.66
TREM1Q9NP99 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.54□□□□□ -2.66
TREM1Q9NP99 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.54□□□□□ -2.66
TREM1Q9NP99 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.54□□□□□ -2.66
TREM1Q9NP99 MIR527-201ENST00000385244 85 ntBASIC-1.54□□□□□ -2.66
TREM1Q9NP99 MIR889-201ENST00000401280 79 ntBASIC-1.54□□□□□ -2.66
TREM1Q9NP99 MIR4520-1-201ENST00000582609 70 ntBASIC-1.54□□□□□ -2.66
TREM1Q9NP99 AC037487.3-201ENST00000606668 112 ntBASIC-1.54□□□□□ -2.66
TREM1Q9NP99 MIR6502-201ENST00000617296 76 ntBASIC-1.54□□□□□ -2.66
TREM1Q9NP99 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.54□□□□□ -2.66
TREM1Q9NP99 snoU18.1-201ENST00000629629 71 ntBASIC-1.54□□□□□ -2.66
TREM1Q9NP99 SNORA25.1-201ENST00000362326 128 ntBASIC-1.55□□□□□ -2.66
TREM1Q9NP99 RNY1P6-201ENST00000384193 109 ntBASIC-1.55□□□□□ -2.66
TREM1Q9NP99 RNU6-662P-201ENST00000384253 104 ntBASIC-1.55□□□□□ -2.66
TREM1Q9NP99 RNU6-592P-201ENST00000411333 103 ntBASIC-1.55□□□□□ -2.66
TREM1Q9NP99 SCARNA15-202ENST00000516881 127 ntBASIC-1.55□□□□□ -2.66
TREM1Q9NP99 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.55□□□□□ -2.66
TREM1Q9NP99 MIR548AE2-201ENST00000583456 67 ntBASIC-1.55□□□□□ -2.66
TREM1Q9NP99 MIR198-201ENST00000637333 62 ntBASIC-1.55□□□□□ -2.66
TREM1Q9NP99 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.56□□□□□ -2.66
TREM1Q9NP99 SNORA79-201ENST00000408376 140 ntBASIC-1.56□□□□□ -2.66
TREM1Q9NP99 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.56□□□□□ -2.66
TREM1Q9NP99 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.56□□□□□ -2.66
TREM1Q9NP99 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.57□□□□□ -2.66
TREM1Q9NP99 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.57□□□□□ -2.66
TREM1Q9NP99 MIR29B1-201ENST00000385015 81 ntBASIC-1.57□□□□□ -2.66
TREM1Q9NP99 MT-TT-201ENST00000387460 66 ntBASIC-1.57□□□□□ -2.66
TREM1Q9NP99 AL606845.1-201ENST00000404881 255 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms