Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 RNU4-32P-201ENST00000363404 141 ntBASIC1.99□□□□□ -2.09
ZFYVE1Q9HBF4 Y_RNA.221-201ENST00000364248 96 ntBASIC1.99□□□□□ -2.09
ZFYVE1Q9HBF4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.99□□□□□ -2.09
ZFYVE1Q9HBF4 AL161932.1-201ENST00000437408 146 ntBASIC1.99□□□□□ -2.09
ZFYVE1Q9HBF4 RNU6-857P-201ENST00000515893 110 ntBASIC1.99□□□□□ -2.09
ZFYVE1Q9HBF4 RNU6-531P-201ENST00000516694 104 ntBASIC1.99□□□□□ -2.09
ZFYVE1Q9HBF4 AP003716.2-201ENST00000528260 108 ntBASIC1.99□□□□□ -2.09
ZFYVE1Q9HBF4 MIR8066-201ENST00000617280 78 ntBASIC1.99□□□□□ -2.09
ZFYVE1Q9HBF4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ZFYVE1Q9HBF4 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
ZFYVE1Q9HBF4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.98□□□□□ -2.09
ZFYVE1Q9HBF4 MIR5089-201ENST00000580047 84 ntBASIC1.98□□□□□ -2.09
ZFYVE1Q9HBF4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.98□□□□□ -2.09
ZFYVE1Q9HBF4 RNU6-403P-201ENST00000363163 104 ntBASIC1.97□□□□□ -2.09
ZFYVE1Q9HBF4 RNU4-52P-201ENST00000384209 138 ntBASIC1.97□□□□□ -2.09
ZFYVE1Q9HBF4 SNORA72.6-201ENST00000384520 129 ntBASIC1.97□□□□□ -2.09
ZFYVE1Q9HBF4 MIR519C-201ENST00000385053 87 ntBASIC1.97□□□□□ -2.09
ZFYVE1Q9HBF4 SNORD93-201ENST00000408813 74 ntBASIC1.97□□□□□ -2.09
ZFYVE1Q9HBF4 SNRPGP12-201ENST00000449481 213 ntBASIC1.97□□□□□ -2.09
ZFYVE1Q9HBF4 AC048334.1-201ENST00000477975 159 ntBASIC1.97□□□□□ -2.09
ZFYVE1Q9HBF4 MIR514B-201ENST00000516774 80 ntBASIC1.97□□□□□ -2.09
ZFYVE1Q9HBF4 AL512310.8-201ENST00000550183 120 ntBASIC1.97□□□□□ -2.09
ZFYVE1Q9HBF4 MIR4491-201ENST00000581087 68 ntBASIC1.97□□□□□ -2.09
ZFYVE1Q9HBF4 ZNF355P-201ENST00000427301 3216 ntBASIC1.96□□□□□ -2.1
ZFYVE1Q9HBF4 Y_RNA.316-201ENST00000365118 111 ntBASIC1.96□□□□□ -2.1
ZFYVE1Q9HBF4 MIR516A2-201ENST00000384888 90 ntBASIC1.96□□□□□ -2.1
ZFYVE1Q9HBF4 MIR516A1-201ENST00000385033 90 ntBASIC1.96□□□□□ -2.1
ZFYVE1Q9HBF4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
ZFYVE1Q9HBF4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.96□□□□□ -2.1
ZFYVE1Q9HBF4 HMGN2P38-201ENST00000423806 265 ntBASIC1.96□□□□□ -2.1
ZFYVE1Q9HBF4 RPL30P7-201ENST00000479312 323 ntBASIC1.96□□□□□ -2.1
ZFYVE1Q9HBF4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ZFYVE1Q9HBF4 AL359851.1-201ENST00000569460 4997 ntBASIC1.96□□□□□ -2.1
ZFYVE1Q9HBF4 SNORD33-201ENST00000362761 85 ntBASIC1.95□□□□□ -2.1
ZFYVE1Q9HBF4 RNU6-279P-201ENST00000391297 101 ntBASIC1.95□□□□□ -2.1
ZFYVE1Q9HBF4 Y_RNA.607-201ENST00000410597 98 ntBASIC1.95□□□□□ -2.1
ZFYVE1Q9HBF4 RNA5SP489-201ENST00000410986 109 ntBASIC1.95□□□□□ -2.1
ZFYVE1Q9HBF4 RNU7-85P-201ENST00000458851 63 ntBASIC1.95□□□□□ -2.1
ZFYVE1Q9HBF4 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
ZFYVE1Q9HBF4 snoU13.11-201ENST00000459219 104 ntBASIC1.95□□□□□ -2.1
ZFYVE1Q9HBF4 RN7SKP88-201ENST00000516847 250 ntBASIC1.95□□□□□ -2.1
ZFYVE1Q9HBF4 7SK.8-201ENST00000612110 250 ntBASIC1.95□□□□□ -2.1
ZFYVE1Q9HBF4 7SK.11-201ENST00000615477 250 ntBASIC1.95□□□□□ -2.1
ZFYVE1Q9HBF4 7SK.13-201ENST00000622040 250 ntBASIC1.95□□□□□ -2.1
ZFYVE1Q9HBF4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.94□□□□□ -2.1
ZFYVE1Q9HBF4 MIR889-201ENST00000401280 79 ntBASIC1.94□□□□□ -2.1
ZFYVE1Q9HBF4 SNORD83.1-201ENST00000411362 77 ntBASIC1.94□□□□□ -2.1
ZFYVE1Q9HBF4 SNORD4B-201ENST00000459083 72 ntBASIC1.94□□□□□ -2.1
ZFYVE1Q9HBF4 AC093729.1-201ENST00000513074 128 ntBASIC1.94□□□□□ -2.1
ZFYVE1Q9HBF4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
ZFYVE1Q9HBF4 MT-TN-201ENST00000387400 73 ntBASIC1.93□□□□□ -2.1
ZFYVE1Q9HBF4 MIR764-201ENST00000390811 85 ntBASIC1.93□□□□□ -2.1
ZFYVE1Q9HBF4 RPS27P16-201ENST00000425758 201 ntBASIC1.93□□□□□ -2.1
ZFYVE1Q9HBF4 MIR7843-201ENST00000622274 79 ntBASIC1.93□□□□□ -2.1
ZFYVE1Q9HBF4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.93□□□□□ -2.1
ZFYVE1Q9HBF4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
ZFYVE1Q9HBF4 U8.13-201ENST00000390842 128 ntBASIC1.92□□□□□ -2.1
ZFYVE1Q9HBF4 Y_RNA.588-201ENST00000391254 102 ntBASIC1.92□□□□□ -2.1
ZFYVE1Q9HBF4 RNU7-106P-201ENST00000459514 67 ntBASIC1.92□□□□□ -2.1
ZFYVE1Q9HBF4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.92□□□□□ -2.1
ZFYVE1Q9HBF4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
ZFYVE1Q9HBF4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.92□□□□□ -2.1
ZFYVE1Q9HBF4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.92□□□□□ -2.1
ZFYVE1Q9HBF4 AP000553.5-201ENST00000641933 54 ntBASIC1.92□□□□□ -2.1
ZFYVE1Q9HBF4 AC023934.1-201ENST00000574529 2389 ntBASIC1.92□□□□□ -2.1
ZFYVE1Q9HBF4 RNU1-36P-201ENST00000365130 165 ntBASIC1.91□□□□□ -2.1
ZFYVE1Q9HBF4 MT-TF-201ENST00000387314 71 ntBASIC1.91□□□□□ -2.1
ZFYVE1Q9HBF4 MIR934-201ENST00000401241 83 ntBASIC1.91□□□□□ -2.1
ZFYVE1Q9HBF4 SNORA31.2-201ENST00000516019 134 ntBASIC1.91□□□□□ -2.1
ZFYVE1Q9HBF4 RNU11-2P-201ENST00000516898 142 ntBASIC1.91□□□□□ -2.1
ZFYVE1Q9HBF4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.91□□□□□ -2.1
ZFYVE1Q9HBF4 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.91□□□□□ -2.1
ZFYVE1Q9HBF4 RNA5SP432-201ENST00000362480 116 ntBASIC1.9□□□□□ -2.11
ZFYVE1Q9HBF4 Y_RNA.94-201ENST00000363068 106 ntBASIC1.9□□□□□ -2.11
ZFYVE1Q9HBF4 SNORD115-37-201ENST00000363768 82 ntBASIC1.9□□□□□ -2.11
ZFYVE1Q9HBF4 MIR504-201ENST00000385065 83 ntBASIC1.9□□□□□ -2.11
ZFYVE1Q9HBF4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
ZFYVE1Q9HBF4 RNU1-78P-201ENST00000391248 165 ntBASIC1.9□□□□□ -2.11
ZFYVE1Q9HBF4 RNA5SP338-201ENST00000410495 85 ntBASIC1.9□□□□□ -2.11
ZFYVE1Q9HBF4 AC023827.1-201ENST00000569247 97 ntBASIC1.9□□□□□ -2.11
ZFYVE1Q9HBF4 MIR3198-2-201ENST00000577868 80 ntBASIC1.9□□□□□ -2.11
ZFYVE1Q9HBF4 MIR4448-201ENST00000584360 86 ntBASIC1.9□□□□□ -2.11
ZFYVE1Q9HBF4 AL096840.1-201ENST00000603287 93 ntBASIC1.9□□□□□ -2.11
ZFYVE1Q9HBF4 AC013244.2-201ENST00000603396 103 ntBASIC1.9□□□□□ -2.11
ZFYVE1Q9HBF4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.9□□□□□ -2.11
ZFYVE1Q9HBF4 RNU6-571P-201ENST00000384128 107 ntBASIC1.89□□□□□ -2.11
ZFYVE1Q9HBF4 RNU6-24P-201ENST00000384440 107 ntBASIC1.89□□□□□ -2.11
ZFYVE1Q9HBF4 RNA5SP182-201ENST00000516064 82 ntBASIC1.89□□□□□ -2.11
ZFYVE1Q9HBF4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ZFYVE1Q9HBF4 SNORD36A-201ENST00000362874 73 ntBASIC1.88□□□□□ -2.11
ZFYVE1Q9HBF4 SNORA75.2-201ENST00000391138 150 ntBASIC1.88□□□□□ -2.11
ZFYVE1Q9HBF4 SNORA75.3-201ENST00000391231 150 ntBASIC1.88□□□□□ -2.11
ZFYVE1Q9HBF4 AL591806.2-201ENST00000433122 173 ntBASIC1.88□□□□□ -2.11
ZFYVE1Q9HBF4 AC008834.1-201ENST00000511612 175 ntBASIC1.88□□□□□ -2.11
ZFYVE1Q9HBF4 AC140658.3-201ENST00000567603 271 ntBASIC1.88□□□□□ -2.11
ZFYVE1Q9HBF4 RNU6-580P-201ENST00000365159 107 ntBASIC1.87□□□□□ -2.11
ZFYVE1Q9HBF4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.87□□□□□ -2.11
ZFYVE1Q9HBF4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.87□□□□□ -2.11
ZFYVE1Q9HBF4 AC003989.2-201ENST00000440224 169 ntBASIC1.87□□□□□ -2.11
ZFYVE1Q9HBF4 RNU7-185P-201ENST00000459215 60 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 215.3 ms