Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 Y_RNA.567-201ENST00000384736 106 ntBASIC1.84□□□□□ -2.11
SEMA4AQ9H3S1 MIR548G-201ENST00000408442 89 ntBASIC1.84□□□□□ -2.11
SEMA4AQ9H3S1 AC027119.1-201ENST00000440877 241 ntBASIC1.84□□□□□ -2.11
SEMA4AQ9H3S1 AC008834.1-201ENST00000511612 175 ntBASIC1.84□□□□□ -2.11
SEMA4AQ9H3S1 RNU7-137P-201ENST00000516788 62 ntBASIC1.84□□□□□ -2.11
SEMA4AQ9H3S1 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.84□□□□□ -2.11
SEMA4AQ9H3S1 MIR4666B-201ENST00000578142 81 ntBASIC1.84□□□□□ -2.11
SEMA4AQ9H3S1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.84□□□□□ -2.11
SEMA4AQ9H3S1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.84□□□□□ -2.12
SEMA4AQ9H3S1 Y_RNA.96-201ENST00000363092 109 ntBASIC1.83□□□□□ -2.12
SEMA4AQ9H3S1 RNU6-1244P-201ENST00000363614 108 ntBASIC1.83□□□□□ -2.12
SEMA4AQ9H3S1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.83□□□□□ -2.12
SEMA4AQ9H3S1 MIR9-3-201ENST00000385084 90 ntBASIC1.83□□□□□ -2.12
SEMA4AQ9H3S1 HSPE1P24-201ENST00000450782 238 ntBASIC1.83□□□□□ -2.12
SEMA4AQ9H3S1 AC079140.2-201ENST00000506193 142 ntBASIC1.83□□□□□ -2.12
SEMA4AQ9H3S1 CYP3A52P-201ENST00000563326 91 ntBASIC1.83□□□□□ -2.12
SEMA4AQ9H3S1 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
SEMA4AQ9H3S1 RMST_2.1-201ENST00000617263 136 ntBASIC1.83□□□□□ -2.12
SEMA4AQ9H3S1 MIR6734-201ENST00000621166 68 ntBASIC1.83□□□□□ -2.12
SEMA4AQ9H3S1 AC025521.1-201ENST00000621624 286 ntBASIC1.83□□□□□ -2.12
SEMA4AQ9H3S1 Z97988.1-201ENST00000637697 135 ntBASIC1.83□□□□□ -2.12
SEMA4AQ9H3S1 RNU6-509P-201ENST00000363519 107 ntBASIC1.82□□□□□ -2.12
SEMA4AQ9H3S1 RNA5SP48-201ENST00000363969 126 ntBASIC1.82□□□□□ -2.12
SEMA4AQ9H3S1 MIR181B2-201ENST00000385004 89 ntBASIC1.82□□□□□ -2.12
SEMA4AQ9H3S1 RNU6-613P-201ENST00000410412 108 ntBASIC1.82□□□□□ -2.12
SEMA4AQ9H3S1 RPS29P11-201ENST00000496507 171 ntBASIC1.82□□□□□ -2.12
SEMA4AQ9H3S1 MTND5P40-201ENST00000559945 246 ntBASIC1.82□□□□□ -2.12
SEMA4AQ9H3S1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.82□□□□□ -2.12
SEMA4AQ9H3S1 AC012676.2-201ENST00000619258 186 ntBASIC1.82□□□□□ -2.12
SEMA4AQ9H3S1 MIR8063-201ENST00000621930 81 ntBASIC1.82□□□□□ -2.12
SEMA4AQ9H3S1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SEMA4AQ9H3S1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SEMA4AQ9H3S1 SNORD1A-201ENST00000364968 72 ntBASIC1.81□□□□□ -2.12
SEMA4AQ9H3S1 RNY1P13-201ENST00000365030 105 ntBASIC1.81□□□□□ -2.12
SEMA4AQ9H3S1 Y_RNA.426-201ENST00000384068 113 ntBASIC1.81□□□□□ -2.12
SEMA4AQ9H3S1 SNORD41-201ENST00000386967 70 ntBASIC1.81□□□□□ -2.12
SEMA4AQ9H3S1 RNU6-279P-201ENST00000391297 101 ntBASIC1.81□□□□□ -2.12
SEMA4AQ9H3S1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.81□□□□□ -2.12
SEMA4AQ9H3S1 RPL30P7-201ENST00000479312 323 ntBASIC1.81□□□□□ -2.12
SEMA4AQ9H3S1 AL513043.2-201ENST00000573941 143 ntBASIC1.81□□□□□ -2.12
SEMA4AQ9H3S1 RNU6-90P-201ENST00000606352 106 ntBASIC1.81□□□□□ -2.12
SEMA4AQ9H3S1 MIR4251-201ENST00000635819 61 ntBASIC1.81□□□□□ -2.12
SEMA4AQ9H3S1 AL161722.3-201ENST00000605789 2983 ntBASIC1.8□□□□□ -2.12
SEMA4AQ9H3S1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SEMA4AQ9H3S1 SNORA25.3-201ENST00000363205 127 ntBASIC1.8□□□□□ -2.12
SEMA4AQ9H3S1 RNU6-524P-201ENST00000384270 107 ntBASIC1.8□□□□□ -2.12
SEMA4AQ9H3S1 RNU7-48P-201ENST00000458875 63 ntBASIC1.8□□□□□ -2.12
SEMA4AQ9H3S1 SNORD111.1-201ENST00000516421 86 ntBASIC1.8□□□□□ -2.12
SEMA4AQ9H3S1 MIR4422-201ENST00000581938 83 ntBASIC1.8□□□□□ -2.12
SEMA4AQ9H3S1 MIR4439-201ENST00000583746 80 ntBASIC1.8□□□□□ -2.12
SEMA4AQ9H3S1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.8□□□□□ -2.12
SEMA4AQ9H3S1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
SEMA4AQ9H3S1 RNU1-78P-201ENST00000391248 165 ntBASIC1.79□□□□□ -2.12
SEMA4AQ9H3S1 MIR934-201ENST00000401241 83 ntBASIC1.79□□□□□ -2.12
SEMA4AQ9H3S1 RNU1-123P-201ENST00000458950 160 ntBASIC1.79□□□□□ -2.12
SEMA4AQ9H3S1 RNU6-922P-201ENST00000516753 99 ntBASIC1.79□□□□□ -2.12
SEMA4AQ9H3S1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.79□□□□□ -2.12
SEMA4AQ9H3S1 MIR4285-201ENST00000581001 85 ntBASIC1.79□□□□□ -2.12
SEMA4AQ9H3S1 RNU6-633P-201ENST00000362612 103 ntBASIC1.78□□□□□ -2.12
SEMA4AQ9H3S1 RNA5SP363-201ENST00000365072 115 ntBASIC1.78□□□□□ -2.12
SEMA4AQ9H3S1 SNORA2B-201ENST00000384583 137 ntBASIC1.78□□□□□ -2.12
SEMA4AQ9H3S1 RNA5SP237-201ENST00000410414 113 ntBASIC1.78□□□□□ -2.12
SEMA4AQ9H3S1 AC244023.1-201ENST00000426884 112 ntBASIC1.78□□□□□ -2.12
SEMA4AQ9H3S1 AC005908.1-201ENST00000468701 347 ntBASIC1.78□□□□□ -2.12
SEMA4AQ9H3S1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.78□□□□□ -2.12
SEMA4AQ9H3S1 RNU6-65P-201ENST00000516332 98 ntBASIC1.78□□□□□ -2.12
SEMA4AQ9H3S1 RNU7-153P-201ENST00000516455 62 ntBASIC1.78□□□□□ -2.12
SEMA4AQ9H3S1 AC141846.1-201ENST00000568348 142 ntBASIC1.78□□□□□ -2.12
SEMA4AQ9H3S1 AC242498.1-201ENST00000604134 111 ntBASIC1.78□□□□□ -2.12
SEMA4AQ9H3S1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.78□□□□□ -2.13
SEMA4AQ9H3S1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SEMA4AQ9H3S1 SNORD114-10-201ENST00000363409 72 ntBASIC1.77□□□□□ -2.13
SEMA4AQ9H3S1 Y_RNA.316-201ENST00000365118 111 ntBASIC1.77□□□□□ -2.13
SEMA4AQ9H3S1 SNORD38B-201ENST00000384690 67 ntBASIC1.77□□□□□ -2.13
SEMA4AQ9H3S1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.77□□□□□ -2.13
SEMA4AQ9H3S1 AC023790.1-201ENST00000482174 347 ntBASIC1.77□□□□□ -2.13
SEMA4AQ9H3S1 SNORD53B-201ENST00000577887 78 ntBASIC1.77□□□□□ -2.13
SEMA4AQ9H3S1 MIR3192-201ENST00000584920 77 ntBASIC1.77□□□□□ -2.13
SEMA4AQ9H3S1 SNORD38B-202ENST00000625943 69 ntBASIC1.77□□□□□ -2.13
SEMA4AQ9H3S1 Y_RNA.173-201ENST00000363776 113 ntBASIC1.76□□□□□ -2.13
SEMA4AQ9H3S1 Y_RNA.354-201ENST00000365448 111 ntBASIC1.76□□□□□ -2.13
SEMA4AQ9H3S1 RNU4-83P-201ENST00000410863 133 ntBASIC1.76□□□□□ -2.13
SEMA4AQ9H3S1 MIR3937-201ENST00000580135 106 ntBASIC1.76□□□□□ -2.13
SEMA4AQ9H3S1 AC090897.1-201ENST00000580909 226 ntBASIC1.76□□□□□ -2.13
SEMA4AQ9H3S1 PRELID3BP2-201ENST00000605362 201 ntBASIC1.76□□□□□ -2.13
SEMA4AQ9H3S1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
SEMA4AQ9H3S1 Y_RNA.98-201ENST00000363109 102 ntBASIC1.75□□□□□ -2.13
SEMA4AQ9H3S1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.75□□□□□ -2.13
SEMA4AQ9H3S1 RNU6-947P-201ENST00000516264 106 ntBASIC1.75□□□□□ -2.13
SEMA4AQ9H3S1 RNA5SP102-201ENST00000516865 106 ntBASIC1.75□□□□□ -2.13
SEMA4AQ9H3S1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SEMA4AQ9H3S1 Y_RNA.94-201ENST00000363068 106 ntBASIC1.74□□□□□ -2.13
SEMA4AQ9H3S1 RNU4-32P-201ENST00000363404 141 ntBASIC1.74□□□□□ -2.13
SEMA4AQ9H3S1 SNORA7.1-201ENST00000363750 139 ntBASIC1.74□□□□□ -2.13
SEMA4AQ9H3S1 RNU6-24P-201ENST00000384440 107 ntBASIC1.74□□□□□ -2.13
SEMA4AQ9H3S1 RNU6-205P-201ENST00000390858 107 ntBASIC1.74□□□□□ -2.13
SEMA4AQ9H3S1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.74□□□□□ -2.13
SEMA4AQ9H3S1 Y_RNA.607-201ENST00000410597 98 ntBASIC1.74□□□□□ -2.13
SEMA4AQ9H3S1 BX276092.1-201ENST00000427368 251 ntBASIC1.74□□□□□ -2.13
SEMA4AQ9H3S1 MIR4500-201ENST00000579472 76 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms