Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
UBQLN3Q9H347 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.32□□□□□ -2.36
UBQLN3Q9H347 Y_RNA.8-201ENST00000362353 102 ntBASIC0.31□□□□□ -2.36
UBQLN3Q9H347 Y_RNA.32-201ENST00000362589 110 ntBASIC0.31□□□□□ -2.36
UBQLN3Q9H347 Y_RNA.150-201ENST00000363562 102 ntBASIC0.31□□□□□ -2.36
UBQLN3Q9H347 RNU6-804P-201ENST00000384286 107 ntBASIC0.31□□□□□ -2.36
UBQLN3Q9H347 SNORA8.2-201ENST00000384372 139 ntBASIC0.31□□□□□ -2.36
UBQLN3Q9H347 MIR193B-201ENST00000384907 83 ntBASIC0.31□□□□□ -2.36
UBQLN3Q9H347 PCNPP3-201ENST00000393579 471 ntBASIC0.31□□□□□ -2.36
UBQLN3Q9H347 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
UBQLN3Q9H347 SNORA31.14-201ENST00000516728 116 ntBASIC0.31□□□□□ -2.36
UBQLN3Q9H347 MTND5P34-201ENST00000568888 325 ntBASIC0.31□□□□□ -2.36
UBQLN3Q9H347 AL359881.1-201ENST00000602916 267 ntBASIC0.31□□□□□ -2.36
UBQLN3Q9H347 FTX_2.1-201ENST00000618816 94 ntBASIC0.31□□□□□ -2.36
UBQLN3Q9H347 MIR103A1-201ENST00000362165 78 ntBASIC0.3□□□□□ -2.36
UBQLN3Q9H347 RNA5SP133-201ENST00000363368 119 ntBASIC0.3□□□□□ -2.36
UBQLN3Q9H347 Y_RNA.298-201ENST00000364960 107 ntBASIC0.3□□□□□ -2.36
UBQLN3Q9H347 RNU6-291P-201ENST00000384720 107 ntBASIC0.3□□□□□ -2.36
UBQLN3Q9H347 RNU6-535P-201ENST00000384722 107 ntBASIC0.3□□□□□ -2.36
UBQLN3Q9H347 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
UBQLN3Q9H347 Y_RNA.580-201ENST00000391004 95 ntBASIC0.3□□□□□ -2.36
UBQLN3Q9H347 RNU6-531P-201ENST00000516694 104 ntBASIC0.3□□□□□ -2.36
UBQLN3Q9H347 RNU7-137P-201ENST00000516788 62 ntBASIC0.3□□□□□ -2.36
UBQLN3Q9H347 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.3□□□□□ -2.36
UBQLN3Q9H347 AL137067.1-201ENST00000615933 120 ntBASIC0.3□□□□□ -2.36
UBQLN3Q9H347 AC105081.1-201ENST00000617727 106 ntBASIC0.3□□□□□ -2.36
UBQLN3Q9H347 U6.109-201ENST00000636749 87 ntBASIC0.3□□□□□ -2.36
UBQLN3Q9H347 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.3□□□□□ -2.36
UBQLN3Q9H347 SNORD44.1-201ENST00000363202 61 ntBASIC0.29□□□□□ -2.36
UBQLN3Q9H347 SNORD118-201ENST00000363593 134 ntBASIC0.29□□□□□ -2.36
UBQLN3Q9H347 Y_RNA.174-201ENST00000363781 105 ntBASIC0.29□□□□□ -2.36
UBQLN3Q9H347 Y_RNA.270-201ENST00000364693 104 ntBASIC0.29□□□□□ -2.36
UBQLN3Q9H347 RNU6-915P-201ENST00000364943 103 ntBASIC0.29□□□□□ -2.36
UBQLN3Q9H347 Y_RNA.398-201ENST00000383952 99 ntBASIC0.29□□□□□ -2.36
UBQLN3Q9H347 Y_RNA.536-201ENST00000384621 113 ntBASIC0.29□□□□□ -2.36
UBQLN3Q9H347 RNU6-1194P-201ENST00000516208 104 ntBASIC0.29□□□□□ -2.36
UBQLN3Q9H347 RNY4P20-201ENST00000516678 93 ntBASIC0.29□□□□□ -2.36
UBQLN3Q9H347 MIR3144-201ENST00000579460 79 ntBASIC0.29□□□□□ -2.36
UBQLN3Q9H347 SNORA36.1-201ENST00000363424 132 ntBASIC0.28□□□□□ -2.36
UBQLN3Q9H347 RNU6-886P-201ENST00000384319 105 ntBASIC0.28□□□□□ -2.36
UBQLN3Q9H347 RNU6-1104P-201ENST00000384723 104 ntBASIC0.28□□□□□ -2.36
UBQLN3Q9H347 MIR513C-201ENST00000401352 84 ntBASIC0.28□□□□□ -2.36
UBQLN3Q9H347 RNU4-69P-201ENST00000410677 143 ntBASIC0.28□□□□□ -2.36
UBQLN3Q9H347 SNRPGP12-201ENST00000449481 213 ntBASIC0.28□□□□□ -2.36
UBQLN3Q9H347 AC138749.4-201ENST00000563970 127 ntBASIC0.28□□□□□ -2.36
UBQLN3Q9H347 MIR1273G-201ENST00000577677 100 ntBASIC0.28□□□□□ -2.36
UBQLN3Q9H347 RNU4-58P-201ENST00000363192 141 ntBASIC0.27□□□□□ -2.37
UBQLN3Q9H347 SNORD114-10-201ENST00000363409 72 ntBASIC0.27□□□□□ -2.37
UBQLN3Q9H347 RNU6-1229P-201ENST00000364295 107 ntBASIC0.27□□□□□ -2.37
UBQLN3Q9H347 Y_RNA.299-201ENST00000364973 94 ntBASIC0.27□□□□□ -2.37
UBQLN3Q9H347 RNA5SP268-201ENST00000516828 124 ntBASIC0.27□□□□□ -2.37
UBQLN3Q9H347 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.27□□□□□ -2.37
UBQLN3Q9H347 MTND5P41-201ENST00000517498 206 ntBASIC0.27□□□□□ -2.37
UBQLN3Q9H347 IGKV1-22-201ENST00000524313 326 ntBASIC0.27□□□□□ -2.37
UBQLN3Q9H347 MIR3121-201ENST00000579680 77 ntBASIC0.27□□□□□ -2.37
UBQLN3Q9H347 MIR548X2-201ENST00000579776 100 ntBASIC0.27□□□□□ -2.37
UBQLN3Q9H347 Y_RNA.119-201ENST00000363301 96 ntBASIC0.26□□□□□ -2.37
UBQLN3Q9H347 RNU6-1327P-201ENST00000365302 105 ntBASIC0.26□□□□□ -2.37
UBQLN3Q9H347 SUMO1P3-201ENST00000439961 304 ntBASIC0.26□□□□□ -2.37
UBQLN3Q9H347 Y_RNA.692-201ENST00000516627 105 ntBASIC0.26□□□□□ -2.37
UBQLN3Q9H347 RNA5SP62-201ENST00000363457 110 ntBASIC0.25□□□□□ -2.37
UBQLN3Q9H347 SNORA63.5-201ENST00000363548 123 ntBASIC0.25□□□□□ -2.37
UBQLN3Q9H347 RNA5SP245-201ENST00000364239 121 ntBASIC0.25□□□□□ -2.37
UBQLN3Q9H347 Y_RNA.294-201ENST00000364916 102 ntBASIC0.25□□□□□ -2.37
UBQLN3Q9H347 Y_RNA.400-201ENST00000383963 111 ntBASIC0.25□□□□□ -2.37
UBQLN3Q9H347 Y_RNA.420-201ENST00000384043 110 ntBASIC0.25□□□□□ -2.37
UBQLN3Q9H347 MIR206-201ENST00000384872 86 ntBASIC0.25□□□□□ -2.37
UBQLN3Q9H347 RNU6-1321P-201ENST00000390905 107 ntBASIC0.25□□□□□ -2.37
UBQLN3Q9H347 AC108740.1-201ENST00000498629 225 ntBASIC0.25□□□□□ -2.37
UBQLN3Q9H347 RNU6-135P-201ENST00000516769 101 ntBASIC0.25□□□□□ -2.37
UBQLN3Q9H347 RNU6-794P-201ENST00000517261 64 ntBASIC0.25□□□□□ -2.37
UBQLN3Q9H347 AP001328.1-201ENST00000528550 176 ntBASIC0.25□□□□□ -2.37
UBQLN3Q9H347 AC098479.1-201ENST00000609225 154 ntBASIC0.25□□□□□ -2.37
UBQLN3Q9H347 AC021753.1-201ENST00000635724 168 ntBASIC0.25□□□□□ -2.37
UBQLN3Q9H347 MIR101-2-201ENST00000362195 79 ntBASIC0.24□□□□□ -2.37
UBQLN3Q9H347 Y_RNA.114-201ENST00000363265 113 ntBASIC0.24□□□□□ -2.37
UBQLN3Q9H347 RNA5SP325-201ENST00000363756 130 ntBASIC0.24□□□□□ -2.37
UBQLN3Q9H347 Y_RNA.215-201ENST00000364204 112 ntBASIC0.24□□□□□ -2.37
UBQLN3Q9H347 Y_RNA.258-201ENST00000364613 105 ntBASIC0.24□□□□□ -2.37
UBQLN3Q9H347 RNY1P2-201ENST00000364820 117 ntBASIC0.24□□□□□ -2.37
UBQLN3Q9H347 Y_RNA.448-201ENST00000384185 108 ntBASIC0.24□□□□□ -2.37
UBQLN3Q9H347 MIR569-201ENST00000385228 96 ntBASIC0.24□□□□□ -2.37
UBQLN3Q9H347 RNU6-1307P-201ENST00000391012 103 ntBASIC0.24□□□□□ -2.37
UBQLN3Q9H347 SNORD77B-201ENST00000391112 67 ntBASIC0.24□□□□□ -2.37
UBQLN3Q9H347 RNA5SP272-201ENST00000516095 111 ntBASIC0.24□□□□□ -2.37
UBQLN3Q9H347 RNA5SP227-201ENST00000516184 113 ntBASIC0.24□□□□□ -2.37
UBQLN3Q9H347 MIR330-201ENST00000362196 94 ntBASIC0.23□□□□□ -2.37
UBQLN3Q9H347 RNU6-616P-201ENST00000384353 107 ntBASIC0.23□□□□□ -2.37
UBQLN3Q9H347 MIRLET7F2-201ENST00000385277 83 ntBASIC0.23□□□□□ -2.37
UBQLN3Q9H347 MT-TI-201ENST00000387365 69 ntBASIC0.23□□□□□ -2.37
UBQLN3Q9H347 AC073261.1-201ENST00000429409 121 ntBASIC0.23□□□□□ -2.37
UBQLN3Q9H347 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.23□□□□□ -2.37
UBQLN3Q9H347 RNA5SP330-201ENST00000517096 96 ntBASIC0.23□□□□□ -2.37
UBQLN3Q9H347 AP001340.1-201ENST00000624405 217 ntBASIC0.23□□□□□ -2.37
UBQLN3Q9H347 Y_RNA.555-201ENST00000384673 110 ntBASIC0.22□□□□□ -2.37
UBQLN3Q9H347 SNORD28-201ENST00000384706 75 ntBASIC0.22□□□□□ -2.37
UBQLN3Q9H347 AC108059.2-201ENST00000434626 151 ntBASIC0.22□□□□□ -2.37
UBQLN3Q9H347 RNU7-48P-201ENST00000458875 63 ntBASIC0.22□□□□□ -2.37
UBQLN3Q9H347 RN7SKP19-201ENST00000516016 252 ntBASIC0.22□□□□□ -2.37
UBQLN3Q9H347 RNU7-6P-201ENST00000516845 62 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms