Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AL035470.1-201ENST00000622571 220 ntBASIC1.35□□□□□ -2.19
CCDC113Q9H0I3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.34□□□□□ -2.19
CCDC113Q9H0I3 Y_RNA.85-201ENST00000363014 111 ntBASIC1.34□□□□□ -2.19
CCDC113Q9H0I3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CCDC113Q9H0I3 RNY1P10-201ENST00000363268 113 ntBASIC1.33□□□□□ -2.2
CCDC113Q9H0I3 RNA5SP133-201ENST00000363368 119 ntBASIC1.33□□□□□ -2.2
CCDC113Q9H0I3 RNU6-1325P-201ENST00000364905 105 ntBASIC1.33□□□□□ -2.2
CCDC113Q9H0I3 RNU6-733P-201ENST00000410759 104 ntBASIC1.33□□□□□ -2.2
CCDC113Q9H0I3 MIR4804-201ENST00000581683 73 ntBASIC1.33□□□□□ -2.2
CCDC113Q9H0I3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.33□□□□□ -2.2
CCDC113Q9H0I3 U6.109-201ENST00000636749 87 ntBASIC1.33□□□□□ -2.2
CCDC113Q9H0I3 Y_RNA.281-201ENST00000364774 94 ntBASIC1.32□□□□□ -2.2
CCDC113Q9H0I3 Y_RNA.328-201ENST00000365208 113 ntBASIC1.32□□□□□ -2.2
CCDC113Q9H0I3 RNU6-429P-201ENST00000384582 108 ntBASIC1.32□□□□□ -2.2
CCDC113Q9H0I3 RNU1-119P-201ENST00000391122 165 ntBASIC1.32□□□□□ -2.2
CCDC113Q9H0I3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.32□□□□□ -2.2
CCDC113Q9H0I3 AC068339.1-201ENST00000526965 141 ntBASIC1.32□□□□□ -2.2
CCDC113Q9H0I3 AC025627.3-201ENST00000582078 182 ntBASIC1.32□□□□□ -2.2
CCDC113Q9H0I3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC113Q9H0I3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CCDC113Q9H0I3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.31□□□□□ -2.2
CCDC113Q9H0I3 MIR6078-201ENST00000611069 100 ntBASIC1.31□□□□□ -2.2
CCDC113Q9H0I3 RNU6-1107P-201ENST00000364817 104 ntBASIC1.3□□□□□ -2.2
CCDC113Q9H0I3 RNY1P2-201ENST00000364820 117 ntBASIC1.3□□□□□ -2.2
CCDC113Q9H0I3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.3□□□□□ -2.2
CCDC113Q9H0I3 OR2A41P-201ENST00000473586 105 ntBASIC1.3□□□□□ -2.2
CCDC113Q9H0I3 PDCD5P2-201ENST00000507570 312 ntBASIC1.3□□□□□ -2.2
CCDC113Q9H0I3 RNU4-58P-201ENST00000363192 141 ntBASIC1.29□□□□□ -2.2
CCDC113Q9H0I3 Y_RNA.119-201ENST00000363301 96 ntBASIC1.29□□□□□ -2.2
CCDC113Q9H0I3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.29□□□□□ -2.2
CCDC113Q9H0I3 U8.6-201ENST00000364939 135 ntBASIC1.29□□□□□ -2.2
CCDC113Q9H0I3 AC138749.4-201ENST00000563970 127 ntBASIC1.29□□□□□ -2.2
CCDC113Q9H0I3 MIR5009-201ENST00000578736 100 ntBASIC1.29□□□□□ -2.2
CCDC113Q9H0I3 AP001362.1-201ENST00000625165 124 ntBASIC1.29□□□□□ -2.2
CCDC113Q9H0I3 Y_RNA.13-201ENST00000362403 112 ntBASIC1.28□□□□□ -2.2
CCDC113Q9H0I3 RNU6-369P-201ENST00000362515 102 ntBASIC1.28□□□□□ -2.2
CCDC113Q9H0I3 SNORD105-201ENST00000386910 85 ntBASIC1.28□□□□□ -2.2
CCDC113Q9H0I3 Y_RNA.588-201ENST00000391254 102 ntBASIC1.28□□□□□ -2.2
CCDC113Q9H0I3 RNU7-56P-201ENST00000458744 62 ntBASIC1.28□□□□□ -2.2
CCDC113Q9H0I3 RNU7-102P-201ENST00000458948 62 ntBASIC1.28□□□□□ -2.2
CCDC113Q9H0I3 SNORA25.16-201ENST00000516741 121 ntBASIC1.28□□□□□ -2.2
CCDC113Q9H0I3 SNORD92-201ENST00000585078 85 ntBASIC1.28□□□□□ -2.2
CCDC113Q9H0I3 MIR6082-201ENST00000613604 109 ntBASIC1.28□□□□□ -2.2
CCDC113Q9H0I3 SNORD38.2-201ENST00000384470 69 ntBASIC1.27□□□□□ -2.21
CCDC113Q9H0I3 SNORD20-201ENST00000384550 80 ntBASIC1.27□□□□□ -2.21
CCDC113Q9H0I3 MIR605-201ENST00000385078 83 ntBASIC1.27□□□□□ -2.21
CCDC113Q9H0I3 MIR520H-201ENST00000385126 88 ntBASIC1.27□□□□□ -2.21
CCDC113Q9H0I3 MIR1285-1-201ENST00000408593 84 ntBASIC1.27□□□□□ -2.21
CCDC113Q9H0I3 AC096949.1-201ENST00000412047 152 ntBASIC1.27□□□□□ -2.21
CCDC113Q9H0I3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.27□□□□□ -2.21
CCDC113Q9H0I3 RNA5SP255-201ENST00000516370 107 ntBASIC1.27□□□□□ -2.21
CCDC113Q9H0I3 RNU6-1018P-201ENST00000516577 106 ntBASIC1.27□□□□□ -2.21
CCDC113Q9H0I3 RNU6-531P-201ENST00000516694 104 ntBASIC1.27□□□□□ -2.21
CCDC113Q9H0I3 Y_RNA.709-201ENST00000516952 92 ntBASIC1.27□□□□□ -2.21
CCDC113Q9H0I3 MIR4500-201ENST00000579472 76 ntBASIC1.27□□□□□ -2.21
CCDC113Q9H0I3 MIR4661-201ENST00000582720 75 ntBASIC1.27□□□□□ -2.21
CCDC113Q9H0I3 RMST_2.1-201ENST00000617263 136 ntBASIC1.27□□□□□ -2.21
CCDC113Q9H0I3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CCDC113Q9H0I3 SNORA22-201ENST00000383907 134 ntBASIC1.26□□□□□ -2.21
CCDC113Q9H0I3 RNU6-1307P-201ENST00000391012 103 ntBASIC1.26□□□□□ -2.21
CCDC113Q9H0I3 RNU6-589P-201ENST00000516485 107 ntBASIC1.26□□□□□ -2.21
CCDC113Q9H0I3 MIR376B-201ENST00000614515 100 ntBASIC1.26□□□□□ -2.21
CCDC113Q9H0I3 MIR8070-201ENST00000616510 88 ntBASIC1.26□□□□□ -2.21
CCDC113Q9H0I3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CCDC113Q9H0I3 MIR101-2-201ENST00000362195 79 ntBASIC1.25□□□□□ -2.21
CCDC113Q9H0I3 Y_RNA.360-201ENST00000365512 102 ntBASIC1.25□□□□□ -2.21
CCDC113Q9H0I3 RNU6-1014P-201ENST00000383940 103 ntBASIC1.25□□□□□ -2.21
CCDC113Q9H0I3 RNU6-679P-201ENST00000391003 106 ntBASIC1.25□□□□□ -2.21
CCDC113Q9H0I3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC113Q9H0I3 MIR337-201ENST00000362281 93 ntBASIC1.24□□□□□ -2.21
CCDC113Q9H0I3 Y_RNA.116-201ENST00000363292 103 ntBASIC1.24□□□□□ -2.21
CCDC113Q9H0I3 MIR34C-201ENST00000384831 77 ntBASIC1.24□□□□□ -2.21
CCDC113Q9H0I3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CCDC113Q9H0I3 Y_RNA.676-201ENST00000516393 96 ntBASIC1.24□□□□□ -2.21
CCDC113Q9H0I3 RNU6-919P-201ENST00000516731 104 ntBASIC1.24□□□□□ -2.21
CCDC113Q9H0I3 RNU6-1313P-201ENST00000362622 102 ntBASIC1.23□□□□□ -2.21
CCDC113Q9H0I3 Y_RNA.323-201ENST00000365157 109 ntBASIC1.23□□□□□ -2.21
CCDC113Q9H0I3 MIR1302-5-201ENST00000408164 150 ntBASIC1.23□□□□□ -2.21
CCDC113Q9H0I3 UBL5P1-201ENST00000507979 193 ntBASIC1.23□□□□□ -2.21
CCDC113Q9H0I3 MTND5P40-201ENST00000559945 246 ntBASIC1.23□□□□□ -2.21
CCDC113Q9H0I3 AC013244.2-201ENST00000603396 103 ntBASIC1.23□□□□□ -2.21
CCDC113Q9H0I3 AC096720.1-201ENST00000604441 183 ntBASIC1.23□□□□□ -2.21
CCDC113Q9H0I3 MIR8066-201ENST00000617280 78 ntBASIC1.23□□□□□ -2.21
CCDC113Q9H0I3 Y_RNA.697-201ENST00000516776 113 ntBASIC1.22□□□□□ -2.21
CCDC113Q9H0I3 RNU6-765P-201ENST00000516916 99 ntBASIC1.22□□□□□ -2.21
CCDC113Q9H0I3 AC090897.1-201ENST00000580909 226 ntBASIC1.22□□□□□ -2.21
CCDC113Q9H0I3 Y_RNA.42-201ENST00000362660 108 ntBASIC1.21□□□□□ -2.22
CCDC113Q9H0I3 RNU6-215P-201ENST00000365169 102 ntBASIC1.21□□□□□ -2.22
CCDC113Q9H0I3 MIR1276-201ENST00000408707 83 ntBASIC1.21□□□□□ -2.22
CCDC113Q9H0I3 AC004941.2-201ENST00000427009 228 ntBASIC1.21□□□□□ -2.22
CCDC113Q9H0I3 RNU6-1194P-201ENST00000516208 104 ntBASIC1.21□□□□□ -2.22
CCDC113Q9H0I3 AC008608.1-201ENST00000603910 127 ntBASIC1.21□□□□□ -2.22
CCDC113Q9H0I3 AL442128.1-201ENST00000615151 90 ntBASIC1.21□□□□□ -2.22
CCDC113Q9H0I3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.21□□□□□ -2.22
CCDC113Q9H0I3 RNU6-1335P-201ENST00000365426 107 ntBASIC1.2□□□□□ -2.22
CCDC113Q9H0I3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.2□□□□□ -2.22
CCDC113Q9H0I3 RNA5SP102-201ENST00000516865 106 ntBASIC1.2□□□□□ -2.22
CCDC113Q9H0I3 RNU6-448P-201ENST00000517052 107 ntBASIC1.2□□□□□ -2.22
CCDC113Q9H0I3 AC141557.1-201ENST00000540982 400 ntBASIC1.2□□□□□ -2.22
CCDC113Q9H0I3 MIR4694-201ENST00000578534 80 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 310 ms