Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SERF1AP1-201ENST00000514575 187 ntBASIC-0.98□□□□□ -2.57
NKX6-2Q9C056 AP001328.1-201ENST00000528550 176 ntBASIC-0.98□□□□□ -2.57
NKX6-2Q9C056 MIR4636-201ENST00000582271 80 ntBASIC-0.98□□□□□ -2.57
NKX6-2Q9C056 AP001362.1-201ENST00000625165 124 ntBASIC-0.98□□□□□ -2.57
NKX6-2Q9C056 RNU6-690P-201ENST00000365242 106 ntBASIC-0.99□□□□□ -2.57
NKX6-2Q9C056 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.99□□□□□ -2.57
NKX6-2Q9C056 RNU6-823P-201ENST00000391042 103 ntBASIC-0.99□□□□□ -2.57
NKX6-2Q9C056 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.99□□□□□ -2.57
NKX6-2Q9C056 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.99□□□□□ -2.57
NKX6-2Q9C056 Z95118.1-201ENST00000421372 247 ntBASIC-0.99□□□□□ -2.57
NKX6-2Q9C056 AC021146.6-201ENST00000514659 117 ntBASIC-0.99□□□□□ -2.57
NKX6-2Q9C056 RNU2-35P-201ENST00000516446 142 ntBASIC-0.99□□□□□ -2.57
NKX6-2Q9C056 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.99□□□□□ -2.57
NKX6-2Q9C056 Y_RNA.70-201ENST00000362886 110 ntBASIC-1□□□□□ -2.57
NKX6-2Q9C056 RNU6-806P-201ENST00000365147 105 ntBASIC-1□□□□□ -2.57
NKX6-2Q9C056 SNORA51.5-201ENST00000384126 131 ntBASIC-1□□□□□ -2.57
NKX6-2Q9C056 RNU6-1307P-201ENST00000391012 103 ntBASIC-1□□□□□ -2.57
NKX6-2Q9C056 MIR1252-201ENST00000408861 65 ntBASIC-1□□□□□ -2.57
NKX6-2Q9C056 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1□□□□□ -2.57
NKX6-2Q9C056 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.01□□□□□ -2.57
NKX6-2Q9C056 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.01□□□□□ -2.57
NKX6-2Q9C056 RNU6-651P-201ENST00000411040 105 ntBASIC-1.01□□□□□ -2.57
NKX6-2Q9C056 SPINT5P-201ENST00000448174 155 ntBASIC-1.01□□□□□ -2.57
NKX6-2Q9C056 AL121914.1-201ENST00000450188 156 ntBASIC-1.01□□□□□ -2.57
NKX6-2Q9C056 MIR2113-201ENST00000459007 91 ntBASIC-1.01□□□□□ -2.57
NKX6-2Q9C056 RNY3P15-201ENST00000516297 97 ntBASIC-1.01□□□□□ -2.57
NKX6-2Q9C056 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.02□□□□□ -2.57
NKX6-2Q9C056 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.02□□□□□ -2.57
NKX6-2Q9C056 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.02□□□□□ -2.57
NKX6-2Q9C056 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.02□□□□□ -2.57
NKX6-2Q9C056 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.02□□□□□ -2.57
NKX6-2Q9C056 SNORD115-44-201ENST00000365391 82 ntBASIC-1.02□□□□□ -2.57
NKX6-2Q9C056 RNU4-17P-201ENST00000365598 141 ntBASIC-1.02□□□□□ -2.57
NKX6-2Q9C056 RNU6-101P-201ENST00000410323 104 ntBASIC-1.02□□□□□ -2.57
NKX6-2Q9C056 ELOCP20-201ENST00000422460 345 ntBASIC-1.02□□□□□ -2.57
NKX6-2Q9C056 MTND5P22-201ENST00000458380 195 ntBASIC-1.02□□□□□ -2.57
NKX6-2Q9C056 RNU7-106P-201ENST00000459514 67 ntBASIC-1.02□□□□□ -2.57
NKX6-2Q9C056 RNU6-86P-201ENST00000606534 107 ntBASIC-1.02□□□□□ -2.57
NKX6-2Q9C056 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.03□□□□□ -2.57
NKX6-2Q9C056 Y_RNA.251-201ENST00000364551 99 ntBASIC-1.03□□□□□ -2.57
NKX6-2Q9C056 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.03□□□□□ -2.57
NKX6-2Q9C056 SNORD2.1-201ENST00000458762 69 ntBASIC-1.03□□□□□ -2.57
NKX6-2Q9C056 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.03□□□□□ -2.57
NKX6-2Q9C056 SNORD38.3-201ENST00000516599 73 ntBASIC-1.03□□□□□ -2.57
NKX6-2Q9C056 MIR20A-201ENST00000362279 71 ntBASIC-1.04□□□□□ -2.58
NKX6-2Q9C056 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.04□□□□□ -2.58
NKX6-2Q9C056 RNU6-770P-201ENST00000363929 105 ntBASIC-1.04□□□□□ -2.58
NKX6-2Q9C056 SNORD95.1-201ENST00000364099 68 ntBASIC-1.04□□□□□ -2.58
NKX6-2Q9C056 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.04□□□□□ -2.58
NKX6-2Q9C056 RNU6-900P-201ENST00000384498 102 ntBASIC-1.04□□□□□ -2.58
NKX6-2Q9C056 RNU4-69P-201ENST00000410677 143 ntBASIC-1.04□□□□□ -2.58
NKX6-2Q9C056 snoU13.13-201ENST00000458842 104 ntBASIC-1.04□□□□□ -2.58
NKX6-2Q9C056 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.04□□□□□ -2.58
NKX6-2Q9C056 AL442663.2-201ENST00000554385 511 ntBASIC-1.04□□□□□ -2.58
NKX6-2Q9C056 AC011603.4-201ENST00000611325 277 ntBASIC-1.04□□□□□ -2.58
NKX6-2Q9C056 AC093783.1-201ENST00000612976 329 ntBASIC-1.04□□□□□ -2.58
NKX6-2Q9C056 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.05□□□□□ -2.58
NKX6-2Q9C056 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.05□□□□□ -2.58
NKX6-2Q9C056 RNY3P1-201ENST00000365085 102 ntBASIC-1.05□□□□□ -2.58
NKX6-2Q9C056 RNU6-571P-201ENST00000384128 107 ntBASIC-1.05□□□□□ -2.58
NKX6-2Q9C056 MT-TY-201ENST00000387409 66 ntBASIC-1.05□□□□□ -2.58
NKX6-2Q9C056 RNU6-881P-201ENST00000516813 102 ntBASIC-1.05□□□□□ -2.58
NKX6-2Q9C056 AC009779.6-201ENST00000603972 165 ntBASIC-1.05□□□□□ -2.58
NKX6-2Q9C056 AL365265.1-201ENST00000621045 234 ntBASIC-1.05□□□□□ -2.58
NKX6-2Q9C056 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.06□□□□□ -2.58
NKX6-2Q9C056 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.06□□□□□ -2.58
NKX6-2Q9C056 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.06□□□□□ -2.58
NKX6-2Q9C056 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.06□□□□□ -2.58
NKX6-2Q9C056 AC138393.2-201ENST00000414742 246 ntBASIC-1.06□□□□□ -2.58
NKX6-2Q9C056 RNU7-2P-201ENST00000516096 62 ntBASIC-1.06□□□□□ -2.58
NKX6-2Q9C056 MIR4280-201ENST00000582178 76 ntBASIC-1.06□□□□□ -2.58
NKX6-2Q9C056 RNU2-4P-201ENST00000606190 192 ntBASIC-1.06□□□□□ -2.58
NKX6-2Q9C056 MIR376B-201ENST00000614515 100 ntBASIC-1.06□□□□□ -2.58
NKX6-2Q9C056 MIR6851-201ENST00000617060 67 ntBASIC-1.06□□□□□ -2.58
NKX6-2Q9C056 RNU6-103P-201ENST00000363686 107 ntBASIC-1.07□□□□□ -2.58
NKX6-2Q9C056 RNU4-36P-201ENST00000364294 144 ntBASIC-1.07□□□□□ -2.58
NKX6-2Q9C056 MIR516A2-201ENST00000384888 90 ntBASIC-1.07□□□□□ -2.58
NKX6-2Q9C056 MIR516A1-201ENST00000385033 90 ntBASIC-1.07□□□□□ -2.58
NKX6-2Q9C056 RNU6-138P-201ENST00000515952 107 ntBASIC-1.07□□□□□ -2.58
NKX6-2Q9C056 RNU6-240P-201ENST00000516098 97 ntBASIC-1.07□□□□□ -2.58
NKX6-2Q9C056 RNA5SP236-201ENST00000516169 116 ntBASIC-1.07□□□□□ -2.58
NKX6-2Q9C056 SCARNA17-201ENST00000516183 144 ntBASIC-1.07□□□□□ -2.58
NKX6-2Q9C056 RNU6-850P-201ENST00000516934 103 ntBASIC-1.07□□□□□ -2.58
NKX6-2Q9C056 AC021443.1-201ENST00000604478 211 ntBASIC-1.07□□□□□ -2.58
NKX6-2Q9C056 U6atac.1-201ENST00000616025 117 ntBASIC-1.07□□□□□ -2.58
NKX6-2Q9C056 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.08□□□□□ -2.58
NKX6-2Q9C056 RNA5SP368-201ENST00000364298 116 ntBASIC-1.08□□□□□ -2.58
NKX6-2Q9C056 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.08□□□□□ -2.58
NKX6-2Q9C056 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.08□□□□□ -2.58
NKX6-2Q9C056 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.08□□□□□ -2.58
NKX6-2Q9C056 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.08□□□□□ -2.58
NKX6-2Q9C056 SNORD77B-201ENST00000391112 67 ntBASIC-1.08□□□□□ -2.58
NKX6-2Q9C056 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.08□□□□□ -2.58
NKX6-2Q9C056 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.08□□□□□ -2.58
NKX6-2Q9C056 RNU7-164P-201ENST00000459221 62 ntBASIC-1.08□□□□□ -2.58
NKX6-2Q9C056 RNU7-123P-201ENST00000515911 60 ntBASIC-1.08□□□□□ -2.58
NKX6-2Q9C056 RNU6-287P-201ENST00000516230 98 ntBASIC-1.08□□□□□ -2.58
NKX6-2Q9C056 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.08□□□□□ -2.58
NKX6-2Q9C056 IGKV1-22-201ENST00000524313 326 ntBASIC-1.08□□□□□ -2.58
NKX6-2Q9C056 MIR7111-201ENST00000619751 72 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 331.9 ms