Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 Y_RNA.592-201ENST00000410274 109 ntBASIC-2.65□□□□□ -2.83
SCAPERQ9BY12 Y_RNA.615-201ENST00000410769 117 ntBASIC-2.65□□□□□ -2.83
SCAPERQ9BY12 MTND2P14-201ENST00000482139 351 ntBASIC-2.65□□□□□ -2.83
SCAPERQ9BY12 RNU6-1057P-201ENST00000517162 102 ntBASIC-2.65□□□□□ -2.83
SCAPERQ9BY12 AC097639.2-201ENST00000603159 172 ntBASIC-2.65□□□□□ -2.83
SCAPERQ9BY12 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.66□□□□□ -2.83
SCAPERQ9BY12 RNU6-850P-201ENST00000516934 103 ntBASIC-2.66□□□□□ -2.83
SCAPERQ9BY12 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.67□□□□□ -2.84
SCAPERQ9BY12 Y_RNA.414-201ENST00000384011 101 ntBASIC-2.67□□□□□ -2.84
SCAPERQ9BY12 Y_RNA.630-201ENST00000411370 108 ntBASIC-2.67□□□□□ -2.84
SCAPERQ9BY12 MTND3P12-201ENST00000559068 328 ntBASIC-2.67□□□□□ -2.84
SCAPERQ9BY12 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.68□□□□□ -2.84
SCAPERQ9BY12 MIR206-201ENST00000384872 86 ntBASIC-2.68□□□□□ -2.84
SCAPERQ9BY12 AC090616.4-201ENST00000448026 115 ntBASIC-2.68□□□□□ -2.84
SCAPERQ9BY12 SEPT14P4-201ENST00000513445 186 ntBASIC-2.68□□□□□ -2.84
SCAPERQ9BY12 Y_RNA.462-201ENST00000384268 102 ntBASIC-2.68□□□□□ -2.84
SCAPERQ9BY12 Y_RNA.481-201ENST00000384373 102 ntBASIC-2.68□□□□□ -2.84
SCAPERQ9BY12 RNU6-1156P-201ENST00000410365 100 ntBASIC-2.68□□□□□ -2.84
SCAPERQ9BY12 AC013791.1-201ENST00000616619 62 ntBASIC-2.68□□□□□ -2.84
SCAPERQ9BY12 TPTEP1-208ENST00000636884 213 ntBASIC-2.68□□□□□ -2.84
SCAPERQ9BY12 RNU5E-4P-201ENST00000364931 120 ntBASIC-2.69□□□□□ -2.84
SCAPERQ9BY12 RNU6-763P-201ENST00000390865 106 ntBASIC-2.69□□□□□ -2.84
SCAPERQ9BY12 MTATP6P19-201ENST00000413797 659 ntBASIC-2.69□□□□□ -2.84
SCAPERQ9BY12 RPS3AP52-201ENST00000435639 297 ntBASIC-2.69□□□□□ -2.84
SCAPERQ9BY12 AL353691.2-201ENST00000443795 59 ntBASIC-2.69□□□□□ -2.84
SCAPERQ9BY12 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.69□□□□□ -2.84
SCAPERQ9BY12 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.69□□□□□ -2.84
SCAPERQ9BY12 AC068137.3-201ENST00000639191 341 ntBASIC-2.69□□□□□ -2.84
SCAPERQ9BY12 RNU6-54P-201ENST00000365563 107 ntBASIC-2.7□□□□□ -2.84
SCAPERQ9BY12 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.7□□□□□ -2.84
SCAPERQ9BY12 AC018880.2-201ENST00000414265 201 ntBASIC-2.7□□□□□ -2.84
SCAPERQ9BY12 RNU6-570P-201ENST00000517051 105 ntBASIC-2.7□□□□□ -2.84
SCAPERQ9BY12 Y_RNA.23-201ENST00000362496 106 ntBASIC-2.71□□□□□ -2.84
SCAPERQ9BY12 RNU6-1254P-201ENST00000391266 104 ntBASIC-2.71□□□□□ -2.84
SCAPERQ9BY12 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-2.71□□□□□ -2.84
SCAPERQ9BY12 RNU6-79P-201ENST00000362511 107 ntBASIC-2.72□□□□□ -2.84
SCAPERQ9BY12 Y_RNA.531-201ENST00000384589 121 ntBASIC-2.72□□□□□ -2.84
SCAPERQ9BY12 RNU6-1068P-201ENST00000410958 103 ntBASIC-2.72□□□□□ -2.84
SCAPERQ9BY12 RNU7-110P-201ENST00000516891 62 ntBASIC-2.72□□□□□ -2.84
SCAPERQ9BY12 MIR5688-201ENST00000580619 83 ntBASIC-2.72□□□□□ -2.84
SCAPERQ9BY12 SNORA63.6-201ENST00000364921 119 ntBASIC-2.73□□□□□ -2.85
SCAPERQ9BY12 RNY1P6-201ENST00000384193 109 ntBASIC-2.73□□□□□ -2.85
SCAPERQ9BY12 AC009161.1-201ENST00000417306 376 ntBASIC-2.73□□□□□ -2.85
SCAPERQ9BY12 AL161932.1-201ENST00000437408 146 ntBASIC-2.73□□□□□ -2.85
SCAPERQ9BY12 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-2.73□□□□□ -2.85
SCAPERQ9BY12 MIR5692C2-201ENST00000577959 77 ntBASIC-2.73□□□□□ -2.85
SCAPERQ9BY12 AC108081.1-201ENST00000604358 221 ntBASIC-2.73□□□□□ -2.85
SCAPERQ9BY12 AC087741.2-201ENST00000619415 172 ntBASIC-2.73□□□□□ -2.85
SCAPERQ9BY12 MIR3662-201ENST00000637030 95 ntBASIC-2.73□□□□□ -2.85
SCAPERQ9BY12 Y_RNA.76-201ENST00000362931 109 ntBASIC-2.74□□□□□ -2.85
SCAPERQ9BY12 RNU6-1214P-201ENST00000363650 109 ntBASIC-2.74□□□□□ -2.85
SCAPERQ9BY12 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.74□□□□□ -2.85
SCAPERQ9BY12 RNU6-472P-201ENST00000384299 107 ntBASIC-2.74□□□□□ -2.85
SCAPERQ9BY12 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-2.74□□□□□ -2.85
SCAPERQ9BY12 RNU6-243P-201ENST00000391140 107 ntBASIC-2.74□□□□□ -2.85
SCAPERQ9BY12 AL009048.1-201ENST00000450437 298 ntBASIC-2.74□□□□□ -2.85
SCAPERQ9BY12 Y_RNA.655-201ENST00000515919 96 ntBASIC-2.74□□□□□ -2.85
SCAPERQ9BY12 SNORD27-201ENST00000363981 72 ntBASIC-2.75□□□□□ -2.85
SCAPERQ9BY12 RNU6-99P-201ENST00000364721 107 ntBASIC-2.75□□□□□ -2.85
SCAPERQ9BY12 RNU6-80P-201ENST00000384195 107 ntBASIC-2.75□□□□□ -2.85
SCAPERQ9BY12 RNU6-102P-201ENST00000384485 104 ntBASIC-2.75□□□□□ -2.85
SCAPERQ9BY12 RNU6-21P-201ENST00000384710 107 ntBASIC-2.75□□□□□ -2.85
SCAPERQ9BY12 RPL35AP4-201ENST00000412007 102 ntBASIC-2.75□□□□□ -2.85
SCAPERQ9BY12 MTND1P34-201ENST00000438556 671 ntBASIC-2.75□□□□□ -2.85
SCAPERQ9BY12 MIR1270-201ENST00000459320 83 ntBASIC-2.75□□□□□ -2.85
SCAPERQ9BY12 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-2.75□□□□□ -2.85
SCAPERQ9BY12 AC005899.2-201ENST00000584353 90 ntBASIC-2.75□□□□□ -2.85
SCAPERQ9BY12 AC040904.1-201ENST00000590850 223 ntBASIC-2.75□□□□□ -2.85
SCAPERQ9BY12 U6.96-201ENST00000636425 70 ntBASIC-2.75□□□□□ -2.85
SCAPERQ9BY12 U6.92-201ENST00000636464 89 ntBASIC-2.75□□□□□ -2.85
SCAPERQ9BY12 RNU6-695P-201ENST00000391157 104 ntBASIC-2.76□□□□□ -2.85
SCAPERQ9BY12 SCARNA15-202ENST00000516881 127 ntBASIC-2.76□□□□□ -2.85
SCAPERQ9BY12 AC018645.2-201ENST00000609151 472 ntBASIC-2.76□□□□□ -2.85
SCAPERQ9BY12 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.76□□□□□ -2.85
SCAPERQ9BY12 Y_RNA.296-201ENST00000364930 108 ntBASIC-2.76□□□□□ -2.85
SCAPERQ9BY12 Y_RNA.301-201ENST00000364990 103 ntBASIC-2.76□□□□□ -2.85
SCAPERQ9BY12 Y_RNA.380-201ENST00000365663 111 ntBASIC-2.76□□□□□ -2.85
SCAPERQ9BY12 Y_RNA.473-201ENST00000384333 102 ntBASIC-2.76□□□□□ -2.85
SCAPERQ9BY12 MIR122-201ENST00000385044 85 ntBASIC-2.76□□□□□ -2.85
SCAPERQ9BY12 MIR526A2-201ENST00000390198 65 ntBASIC-2.76□□□□□ -2.85
SCAPERQ9BY12 Y_RNA.594-201ENST00000410373 140 ntBASIC-2.76□□□□□ -2.85
SCAPERQ9BY12 SNORD42B-201ENST00000458893 67 ntBASIC-2.76□□□□□ -2.85
SCAPERQ9BY12 Y_RNA.704-201ENST00000516851 102 ntBASIC-2.76□□□□□ -2.85
SCAPERQ9BY12 MIR4490-201ENST00000582647 84 ntBASIC-2.76□□□□□ -2.85
SCAPERQ9BY12 Y_RNA.778-201ENST00000620203 90 ntBASIC-2.76□□□□□ -2.85
SCAPERQ9BY12 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.76□□□□□ -2.85
SCAPERQ9BY12 RNU6-1050P-201ENST00000410388 107 ntBASIC-2.77□□□□□ -2.85
SCAPERQ9BY12 RNU4-88P-201ENST00000411220 86 ntBASIC-2.77□□□□□ -2.85
SCAPERQ9BY12 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-2.77□□□□□ -2.85
SCAPERQ9BY12 SNRPGP8-201ENST00000454064 226 ntBASIC-2.77□□□□□ -2.85
SCAPERQ9BY12 RNU6-191P-201ENST00000516295 94 ntBASIC-2.77□□□□□ -2.85
SCAPERQ9BY12 Y_RNA.677-201ENST00000516401 85 ntBASIC-2.77□□□□□ -2.85
SCAPERQ9BY12 RNU6-566P-201ENST00000516790 107 ntBASIC-2.77□□□□□ -2.85
SCAPERQ9BY12 MIR548AM-201ENST00000584298 74 ntBASIC-2.77□□□□□ -2.85
SCAPERQ9BY12 RNU2-4P-201ENST00000606190 192 ntBASIC-2.77□□□□□ -2.85
SCAPERQ9BY12 SNORD36A-201ENST00000362874 73 ntBASIC-2.78□□□□□ -2.85
SCAPERQ9BY12 SNORD101-201ENST00000384027 73 ntBASIC-2.78□□□□□ -2.85
SCAPERQ9BY12 ELOCP20-201ENST00000422460 345 ntBASIC-2.78□□□□□ -2.85
SCAPERQ9BY12 FGF7P4-201ENST00000509595 295 ntBASIC-2.78□□□□□ -2.85
SCAPERQ9BY12 RNU7-2P-201ENST00000516096 62 ntBASIC-2.78□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms