Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 MIR26B-201ENST00000362251 77 ntBASIC1.23□□□□□ -2.21
SMOQ99835 Y_RNA.155-201ENST00000363632 101 ntBASIC1.23□□□□□ -2.21
SMOQ99835 RNU6-934P-201ENST00000365154 107 ntBASIC1.23□□□□□ -2.21
SMOQ99835 RNU6-106P-201ENST00000384405 107 ntBASIC1.23□□□□□ -2.21
SMOQ99835 MIR605-201ENST00000385078 83 ntBASIC1.23□□□□□ -2.21
SMOQ99835 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.23□□□□□ -2.21
SMOQ99835 AC022709.1-201ENST00000615967 87 ntBASIC1.23□□□□□ -2.21
SMOQ99835 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SMOQ99835 AC023934.1-201ENST00000574529 2389 ntBASIC1.22□□□□□ -2.21
SMOQ99835 Y_RNA.205-201ENST00000364128 113 ntBASIC1.22□□□□□ -2.21
SMOQ99835 RNU6-755P-201ENST00000364400 103 ntBASIC1.22□□□□□ -2.21
SMOQ99835 RNU6-409P-201ENST00000384114 104 ntBASIC1.22□□□□□ -2.21
SMOQ99835 RNU6-554P-201ENST00000410466 106 ntBASIC1.22□□□□□ -2.21
SMOQ99835 RNU6-733P-201ENST00000410759 104 ntBASIC1.22□□□□□ -2.21
SMOQ99835 PDCD5P2-201ENST00000507570 312 ntBASIC1.22□□□□□ -2.21
SMOQ99835 MIR4771-2-201ENST00000577758 74 ntBASIC1.22□□□□□ -2.21
SMOQ99835 MIR4771-1-201ENST00000582617 74 ntBASIC1.22□□□□□ -2.21
SMOQ99835 RNU6-369P-201ENST00000362515 102 ntBASIC1.21□□□□□ -2.22
SMOQ99835 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
SMOQ99835 RNU7-185P-201ENST00000459215 60 ntBASIC1.21□□□□□ -2.22
SMOQ99835 AC020891.4-201ENST00000605745 93 ntBASIC1.21□□□□□ -2.22
SMOQ99835 PVT1_3.1-201ENST00000620853 95 ntBASIC1.21□□□□□ -2.22
SMOQ99835 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SMOQ99835 Y_RNA.163-201ENST00000363702 113 ntBASIC1.2□□□□□ -2.22
SMOQ99835 RNU1-36P-201ENST00000365130 165 ntBASIC1.2□□□□□ -2.22
SMOQ99835 Y_RNA.360-201ENST00000365512 102 ntBASIC1.2□□□□□ -2.22
SMOQ99835 MIR598-201ENST00000384868 97 ntBASIC1.2□□□□□ -2.22
SMOQ99835 SNORD93-201ENST00000408813 74 ntBASIC1.2□□□□□ -2.22
SMOQ99835 RNU6-994P-201ENST00000410507 111 ntBASIC1.2□□□□□ -2.22
SMOQ99835 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.2□□□□□ -2.22
SMOQ99835 RNU7-48P-201ENST00000458875 63 ntBASIC1.2□□□□□ -2.22
SMOQ99835 UBL5P1-201ENST00000507979 193 ntBASIC1.2□□□□□ -2.22
SMOQ99835 AC133485.1-201ENST00000567176 124 ntBASIC1.2□□□□□ -2.22
SMOQ99835 MIR376B-201ENST00000614515 100 ntBASIC1.2□□□□□ -2.22
SMOQ99835 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SMOQ99835 Y_RNA.328-201ENST00000365208 113 ntBASIC1.19□□□□□ -2.22
SMOQ99835 MIR19B1-201ENST00000384829 87 ntBASIC1.19□□□□□ -2.22
SMOQ99835 MIR34C-201ENST00000384831 77 ntBASIC1.19□□□□□ -2.22
SMOQ99835 MIR577-201ENST00000385196 96 ntBASIC1.19□□□□□ -2.22
SMOQ99835 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
SMOQ99835 Y_RNA.588-201ENST00000391254 102 ntBASIC1.19□□□□□ -2.22
SMOQ99835 RNU6-447P-201ENST00000410293 104 ntBASIC1.19□□□□□ -2.22
SMOQ99835 RNU6-1118P-201ENST00000410382 104 ntBASIC1.19□□□□□ -2.22
SMOQ99835 RNU6-1076P-201ENST00000410397 104 ntBASIC1.19□□□□□ -2.22
SMOQ99835 RNU6-355P-201ENST00000410427 104 ntBASIC1.19□□□□□ -2.22
SMOQ99835 RNU6-791P-201ENST00000410467 104 ntBASIC1.19□□□□□ -2.22
SMOQ99835 RNU6-705P-201ENST00000410601 104 ntBASIC1.19□□□□□ -2.22
SMOQ99835 RNU6-1100P-201ENST00000410691 104 ntBASIC1.19□□□□□ -2.22
SMOQ99835 RNU6-860P-201ENST00000410860 104 ntBASIC1.19□□□□□ -2.22
SMOQ99835 RNU6-1217P-201ENST00000411276 104 ntBASIC1.19□□□□□ -2.22
SMOQ99835 RNU6-785P-201ENST00000411324 104 ntBASIC1.19□□□□□ -2.22
SMOQ99835 RPS26P5-201ENST00000418544 335 ntBASIC1.19□□□□□ -2.22
SMOQ99835 AC138749.4-201ENST00000563970 127 ntBASIC1.19□□□□□ -2.22
SMOQ99835 MIR4491-201ENST00000581087 68 ntBASIC1.19□□□□□ -2.22
SMOQ99835 U6.90-201ENST00000614007 104 ntBASIC1.19□□□□□ -2.22
SMOQ99835 U6.70-201ENST00000620287 104 ntBASIC1.19□□□□□ -2.22
SMOQ99835 MIR1257-201ENST00000408490 117 ntBASIC1.18□□□□□ -2.22
SMOQ99835 SNORA19.1-201ENST00000410656 129 ntBASIC1.18□□□□□ -2.22
SMOQ99835 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
SMOQ99835 RNU6-1018P-201ENST00000516577 106 ntBASIC1.18□□□□□ -2.22
SMOQ99835 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
SMOQ99835 U6.109-201ENST00000636749 87 ntBASIC1.18□□□□□ -2.22
SMOQ99835 AL512310.12-203ENST00000640543 90 ntBASIC1.18□□□□□ -2.22
SMOQ99835 RNU6-1313P-201ENST00000362622 102 ntBASIC1.17□□□□□ -2.22
SMOQ99835 RNA5SP133-201ENST00000363368 119 ntBASIC1.17□□□□□ -2.22
SMOQ99835 RNU6-865P-201ENST00000364772 107 ntBASIC1.17□□□□□ -2.22
SMOQ99835 RNU6-1201P-201ENST00000384227 107 ntBASIC1.17□□□□□ -2.22
SMOQ99835 MIR1302-5-201ENST00000408164 150 ntBASIC1.17□□□□□ -2.22
SMOQ99835 SNORD124-201ENST00000459577 104 ntBASIC1.17□□□□□ -2.22
SMOQ99835 MIR4694-201ENST00000578534 80 ntBASIC1.17□□□□□ -2.22
SMOQ99835 MIR4676-201ENST00000583078 72 ntBASIC1.17□□□□□ -2.22
SMOQ99835 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SMOQ99835 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SMOQ99835 MIR450A1-201ENST00000362262 91 ntBASIC1.16□□□□□ -2.22
SMOQ99835 Y_RNA.98-201ENST00000363109 102 ntBASIC1.16□□□□□ -2.22
SMOQ99835 RNU6-1099P-201ENST00000363533 107 ntBASIC1.16□□□□□ -2.22
SMOQ99835 Y_RNA.247-201ENST00000364500 92 ntBASIC1.16□□□□□ -2.22
SMOQ99835 RNY1P2-201ENST00000364820 117 ntBASIC1.16□□□□□ -2.22
SMOQ99835 MIR125B2-201ENST00000385128 89 ntBASIC1.16□□□□□ -2.22
SMOQ99835 MIR618-201ENST00000385287 98 ntBASIC1.16□□□□□ -2.22
SMOQ99835 RNU4-83P-201ENST00000410863 133 ntBASIC1.16□□□□□ -2.22
SMOQ99835 SNORA25.16-201ENST00000516741 121 ntBASIC1.16□□□□□ -2.22
SMOQ99835 RNU6-1006P-201ENST00000516998 103 ntBASIC1.16□□□□□ -2.22
SMOQ99835 MIR3613-201ENST00000579844 87 ntBASIC1.16□□□□□ -2.22
SMOQ99835 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.16□□□□□ -2.22
SMOQ99835 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
SMOQ99835 MIR96-201ENST00000362288 78 ntBASIC1.15□□□□□ -2.23
SMOQ99835 RNU6-403P-201ENST00000363163 104 ntBASIC1.15□□□□□ -2.23
SMOQ99835 RNU6-153P-201ENST00000364422 104 ntBASIC1.15□□□□□ -2.23
SMOQ99835 SNORA25.8-201ENST00000364831 128 ntBASIC1.15□□□□□ -2.23
SMOQ99835 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SMOQ99835 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.15□□□□□ -2.23
SMOQ99835 RPS29P1-201ENST00000465274 159 ntBASIC1.15□□□□□ -2.23
SMOQ99835 RNU6-1223P-201ENST00000517124 104 ntBASIC1.15□□□□□ -2.23
SMOQ99835 AC141557.1-201ENST00000540982 400 ntBASIC1.15□□□□□ -2.23
SMOQ99835 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
SMOQ99835 AP001362.1-201ENST00000625165 124 ntBASIC1.15□□□□□ -2.23
SMOQ99835 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
SMOQ99835 RNY3P2-201ENST00000362918 102 ntBASIC1.14□□□□□ -2.23
SMOQ99835 RNU6-832P-201ENST00000363319 107 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms