Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 RNA5SP237-201ENST00000410414 113 ntBASIC0.63□□□□□ -2.31
ZIM3Q96PE6 RNU6-521P-201ENST00000516663 105 ntBASIC0.63□□□□□ -2.31
ZIM3Q96PE6 RNU6-537P-201ENST00000517277 103 ntBASIC0.63□□□□□ -2.31
ZIM3Q96PE6 MTND5P34-201ENST00000568888 325 ntBASIC0.63□□□□□ -2.31
ZIM3Q96PE6 MIR4498-201ENST00000577599 66 ntBASIC0.63□□□□□ -2.31
ZIM3Q96PE6 AC104984.5-201ENST00000586878 94 ntBASIC0.63□□□□□ -2.31
ZIM3Q96PE6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.62□□□□□ -2.31
ZIM3Q96PE6 MIR96-201ENST00000362288 78 ntBASIC0.62□□□□□ -2.31
ZIM3Q96PE6 Y_RNA.13-201ENST00000362403 112 ntBASIC0.62□□□□□ -2.31
ZIM3Q96PE6 RNY4P6-201ENST00000363667 96 ntBASIC0.62□□□□□ -2.31
ZIM3Q96PE6 RNU4-67P-201ENST00000364569 141 ntBASIC0.62□□□□□ -2.31
ZIM3Q96PE6 RNY1P2-201ENST00000364820 117 ntBASIC0.62□□□□□ -2.31
ZIM3Q96PE6 U8.6-201ENST00000364939 135 ntBASIC0.62□□□□□ -2.31
ZIM3Q96PE6 RNU6-106P-201ENST00000384405 107 ntBASIC0.62□□□□□ -2.31
ZIM3Q96PE6 SNORD20-201ENST00000384550 80 ntBASIC0.62□□□□□ -2.31
ZIM3Q96PE6 MIR608-201ENST00000384820 100 ntBASIC0.62□□□□□ -2.31
ZIM3Q96PE6 MIR200A-201ENST00000384875 90 ntBASIC0.62□□□□□ -2.31
ZIM3Q96PE6 MIR577-201ENST00000385196 96 ntBASIC0.62□□□□□ -2.31
ZIM3Q96PE6 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
ZIM3Q96PE6 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
ZIM3Q96PE6 RPL39P34-201ENST00000477141 156 ntBASIC0.62□□□□□ -2.31
ZIM3Q96PE6 PDCD5P2-201ENST00000507570 312 ntBASIC0.62□□□□□ -2.31
ZIM3Q96PE6 Y_RNA.709-201ENST00000516952 92 ntBASIC0.62□□□□□ -2.31
ZIM3Q96PE6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.62□□□□□ -2.31
ZIM3Q96PE6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
ZIM3Q96PE6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
ZIM3Q96PE6 RNU6-1313P-201ENST00000362622 102 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 SNORA63.5-201ENST00000363548 123 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 RNU6-1325P-201ENST00000364905 105 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 Y_RNA.360-201ENST00000365512 102 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 RNU6-1201P-201ENST00000384227 107 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 RNU6-880P-201ENST00000384526 107 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 RNU6-1081P-201ENST00000384537 107 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 RNU6-816P-201ENST00000390914 107 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 SNORD89-201ENST00000390981 114 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 RNU6-1268P-201ENST00000391214 107 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 RNU6-1239P-201ENST00000391310 107 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 SNORA19.1-201ENST00000410656 129 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 RNU6-321P-201ENST00000410912 106 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 RNU7-48P-201ENST00000458875 63 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 RNU7-102P-201ENST00000458948 62 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 TRMT112P2-201ENST00000512910 132 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 RNU6-1110P-201ENST00000516462 101 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 AC068339.1-201ENST00000526965 141 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.61□□□□□ -2.31
ZIM3Q96PE6 MIR4298-201ENST00000584380 73 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 MIR6082-201ENST00000613604 109 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 MIR6835-201ENST00000621552 64 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 U6.109-201ENST00000636749 87 ntBASIC0.61□□□□□ -2.31
ZIM3Q96PE6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.61□□□□□ -2.31
ZIM3Q96PE6 Y_RNA.116-201ENST00000363292 103 ntBASIC0.6□□□□□ -2.31
ZIM3Q96PE6 RNA5SP133-201ENST00000363368 119 ntBASIC0.6□□□□□ -2.31
ZIM3Q96PE6 RNU6-1107P-201ENST00000364817 104 ntBASIC0.6□□□□□ -2.31
ZIM3Q96PE6 Y_RNA.328-201ENST00000365208 113 ntBASIC0.6□□□□□ -2.31
ZIM3Q96PE6 MIR1257-201ENST00000408490 117 ntBASIC0.6□□□□□ -2.31
ZIM3Q96PE6 RNU6-554P-201ENST00000410466 106 ntBASIC0.6□□□□□ -2.31
ZIM3Q96PE6 AC244098.3-201ENST00000424803 96 ntBASIC0.6□□□□□ -2.31
ZIM3Q96PE6 AL603825.1-201ENST00000438481 80 ntBASIC0.6□□□□□ -2.31
ZIM3Q96PE6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.6□□□□□ -2.31
ZIM3Q96PE6 U7.7-201ENST00000459276 60 ntBASIC0.6□□□□□ -2.31
ZIM3Q96PE6 RNU6-531P-201ENST00000516694 104 ntBASIC0.6□□□□□ -2.31
ZIM3Q96PE6 MIR5009-201ENST00000578736 100 ntBASIC0.6□□□□□ -2.31
ZIM3Q96PE6 AL590095.2-201ENST00000604136 117 ntBASIC0.6□□□□□ -2.31
ZIM3Q96PE6 RNU6-755P-201ENST00000364400 103 ntBASIC0.59□□□□□ -2.31
ZIM3Q96PE6 RNU6-1014P-201ENST00000383940 103 ntBASIC0.59□□□□□ -2.31
ZIM3Q96PE6 RNU6-1056P-201ENST00000383996 107 ntBASIC0.59□□□□□ -2.31
ZIM3Q96PE6 MIR759-201ENST00000390224 91 ntBASIC0.59□□□□□ -2.31
ZIM3Q96PE6 SNORD77B-201ENST00000391112 67 ntBASIC0.59□□□□□ -2.31
ZIM3Q96PE6 MIR942-201ENST00000401111 86 ntBASIC0.59□□□□□ -2.31
ZIM3Q96PE6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.59□□□□□ -2.31
ZIM3Q96PE6 SNORD93-201ENST00000408813 74 ntBASIC0.59□□□□□ -2.31
ZIM3Q96PE6 RNU6-994P-201ENST00000410507 111 ntBASIC0.59□□□□□ -2.31
ZIM3Q96PE6 SNORA7.5-201ENST00000410672 110 ntBASIC0.59□□□□□ -2.31
ZIM3Q96PE6 RNU4-83P-201ENST00000410863 133 ntBASIC0.59□□□□□ -2.31
ZIM3Q96PE6 RNU7-156P-201ENST00000517214 74 ntBASIC0.59□□□□□ -2.31
ZIM3Q96PE6 AC090897.1-201ENST00000580909 226 ntBASIC0.59□□□□□ -2.31
ZIM3Q96PE6 AC091304.10-201ENST00000641554 121 ntBASIC0.59□□□□□ -2.31
ZIM3Q96PE6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
ZIM3Q96PE6 Y_RNA.119-201ENST00000363301 96 ntBASIC0.58□□□□□ -2.32
ZIM3Q96PE6 RNU6-1099P-201ENST00000363533 107 ntBASIC0.58□□□□□ -2.32
ZIM3Q96PE6 RNA5SP245-201ENST00000364239 121 ntBASIC0.58□□□□□ -2.32
ZIM3Q96PE6 Y_RNA.377-201ENST00000365644 108 ntBASIC0.58□□□□□ -2.32
ZIM3Q96PE6 MIR520F-201ENST00000384824 87 ntBASIC0.58□□□□□ -2.32
ZIM3Q96PE6 MIR573-201ENST00000384964 99 ntBASIC0.58□□□□□ -2.32
ZIM3Q96PE6 SNORD105-201ENST00000386910 85 ntBASIC0.58□□□□□ -2.32
ZIM3Q96PE6 MIR938-201ENST00000401216 83 ntBASIC0.58□□□□□ -2.32
ZIM3Q96PE6 FABP5P4-201ENST00000437203 171 ntBASIC0.58□□□□□ -2.32
ZIM3Q96PE6 SNRPGP12-201ENST00000449481 213 ntBASIC0.58□□□□□ -2.32
ZIM3Q96PE6 AL157398.1-201ENST00000452981 186 ntBASIC0.58□□□□□ -2.32
ZIM3Q96PE6 RNU6-765P-201ENST00000516916 99 ntBASIC0.58□□□□□ -2.32
ZIM3Q96PE6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.58□□□□□ -2.32
ZIM3Q96PE6 uc_338.28-201ENST00000612082 187 ntBASIC0.58□□□□□ -2.32
ZIM3Q96PE6 MIR1-1-201ENST00000362147 71 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 Y_RNA.32-201ENST00000362589 110 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 RNU1-93P-201ENST00000364704 169 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 RNU6-44P-201ENST00000384045 107 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 RNU6-291P-201ENST00000384720 107 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 MIR520H-201ENST00000385126 88 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 SNORD100-201ENST00000408573 76 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms