Protein–RNA interactions for Protein: Q96JC1

VPS39, Vam6/Vps39-like protein, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS39Q96JC1 RNU7-123P-201ENST00000515911 60 ntBASIC0.12□□□□□ -2.39
VPS39Q96JC1 AC138907.4-201ENST00000570107 226 ntBASIC0.12□□□□□ -2.39
VPS39Q96JC1 MIR330-201ENST00000362196 94 ntBASIC0.11□□□□□ -2.39
VPS39Q96JC1 RNU4-58P-201ENST00000363192 141 ntBASIC0.11□□□□□ -2.39
VPS39Q96JC1 Y_RNA.297-201ENST00000364950 91 ntBASIC0.11□□□□□ -2.39
VPS39Q96JC1 RNU6-1307P-201ENST00000391012 103 ntBASIC0.11□□□□□ -2.39
VPS39Q96JC1 Y_RNA.644-201ENST00000459006 113 ntBASIC0.11□□□□□ -2.39
VPS39Q96JC1 Y_RNA.674-201ENST00000516362 113 ntBASIC0.11□□□□□ -2.39
VPS39Q96JC1 AC112693.2-201ENST00000556538 232 ntBASIC0.11□□□□□ -2.39
VPS39Q96JC1 MIR4639-201ENST00000584938 69 ntBASIC0.11□□□□□ -2.39
VPS39Q96JC1 Y_RNA.144-201ENST00000363521 113 ntBASIC0.1□□□□□ -2.39
VPS39Q96JC1 RNU4-67P-201ENST00000364569 141 ntBASIC0.1□□□□□ -2.39
VPS39Q96JC1 RNU6-1104P-201ENST00000384723 104 ntBASIC0.1□□□□□ -2.39
VPS39Q96JC1 RNU6-1321P-201ENST00000390905 107 ntBASIC0.1□□□□□ -2.39
VPS39Q96JC1 AC091304.10-201ENST00000641554 121 ntBASIC0.1□□□□□ -2.39
VPS39Q96JC1 MIR101-2-201ENST00000362195 79 ntBASIC0.09□□□□□ -2.4
VPS39Q96JC1 SNORD115-24-201ENST00000363528 82 ntBASIC0.09□□□□□ -2.4
VPS39Q96JC1 RNU4-84P-201ENST00000364200 139 ntBASIC0.09□□□□□ -2.4
VPS39Q96JC1 RNU6-239P-201ENST00000390990 99 ntBASIC0.09□□□□□ -2.4
VPS39Q96JC1 RNU7-121P-201ENST00000516604 62 ntBASIC0.09□□□□□ -2.4
VPS39Q96JC1 AC108081.1-201ENST00000604358 221 ntBASIC0.09□□□□□ -2.4
VPS39Q96JC1 SNORD114-10-201ENST00000363409 72 ntBASIC0.08□□□□□ -2.4
VPS39Q96JC1 RNU6-379P-201ENST00000363813 104 ntBASIC0.08□□□□□ -2.4
VPS39Q96JC1 SNORD37.2-201ENST00000391075 66 ntBASIC0.08□□□□□ -2.4
VPS39Q96JC1 RNU5E-3P-201ENST00000515913 68 ntBASIC0.08□□□□□ -2.4
VPS39Q96JC1 RNU6-861P-201ENST00000516745 106 ntBASIC0.08□□□□□ -2.4
VPS39Q96JC1 RNU1-29P-201ENST00000606574 126 ntBASIC0.08□□□□□ -2.4
VPS39Q96JC1 MIR8087-201ENST00000612745 78 ntBASIC0.08□□□□□ -2.4
VPS39Q96JC1 MIR4315-1-201ENST00000636800 73 ntBASIC0.08□□□□□ -2.4
VPS39Q96JC1 MIR4315-2-201ENST00000640925 73 ntBASIC0.08□□□□□ -2.4
VPS39Q96JC1 RNA5SP214-201ENST00000363378 118 ntBASIC0.07□□□□□ -2.4
VPS39Q96JC1 Y_RNA.251-201ENST00000364551 99 ntBASIC0.07□□□□□ -2.4
VPS39Q96JC1 Y_RNA.298-201ENST00000364960 107 ntBASIC0.07□□□□□ -2.4
VPS39Q96JC1 Y_RNA.466-201ENST00000384294 113 ntBASIC0.07□□□□□ -2.4
VPS39Q96JC1 Y_RNA.476-201ENST00000384347 108 ntBASIC0.07□□□□□ -2.4
VPS39Q96JC1 MIRLET7F2-201ENST00000385277 83 ntBASIC0.07□□□□□ -2.4
VPS39Q96JC1 AC074198.2-201ENST00000508153 258 ntBASIC0.07□□□□□ -2.4
VPS39Q96JC1 RNU7-129P-201ENST00000516128 62 ntBASIC0.07□□□□□ -2.4
VPS39Q96JC1 Y_RNA.690-201ENST00000516603 95 ntBASIC0.07□□□□□ -2.4
VPS39Q96JC1 RNU7-161P-201ENST00000517289 62 ntBASIC0.07□□□□□ -2.4
VPS39Q96JC1 AP002392.1-201ENST00000537692 208 ntBASIC0.07□□□□□ -2.4
VPS39Q96JC1 AC011603.4-201ENST00000611325 277 ntBASIC0.07□□□□□ -2.4
VPS39Q96JC1 MIR499B-201ENST00000636498 73 ntBASIC0.07□□□□□ -2.4
VPS39Q96JC1 Y_RNA.56-201ENST00000362798 112 ntBASIC0.06□□□□□ -2.4
VPS39Q96JC1 RNU6-1126P-201ENST00000384002 107 ntBASIC0.06□□□□□ -2.4
VPS39Q96JC1 MIR206-201ENST00000384872 86 ntBASIC0.06□□□□□ -2.4
VPS39Q96JC1 MIR643-201ENST00000385267 97 ntBASIC0.06□□□□□ -2.4
VPS39Q96JC1 MIR760-201ENST00000390220 80 ntBASIC0.06□□□□□ -2.4
VPS39Q96JC1 RNU4-69P-201ENST00000410677 143 ntBASIC0.06□□□□□ -2.4
VPS39Q96JC1 MTATP6P21-201ENST00000440681 189 ntBASIC0.06□□□□□ -2.4
VPS39Q96JC1 RNU6-135P-201ENST00000516769 101 ntBASIC0.06□□□□□ -2.4
VPS39Q96JC1 RNU6-388P-201ENST00000517012 105 ntBASIC0.06□□□□□ -2.4
VPS39Q96JC1 RNU6-389P-201ENST00000517048 105 ntBASIC0.06□□□□□ -2.4
VPS39Q96JC1 MIR3646-201ENST00000578301 84 ntBASIC0.06□□□□□ -2.4
VPS39Q96JC1 MIR4500-201ENST00000579472 76 ntBASIC0.06□□□□□ -2.4
VPS39Q96JC1 AC104408.1-201ENST00000605241 170 ntBASIC0.06□□□□□ -2.4
VPS39Q96JC1 Y_RNA.205-201ENST00000364128 113 ntBASIC0.05□□□□□ -2.4
VPS39Q96JC1 SNORD114-9-201ENST00000364370 72 ntBASIC0.05□□□□□ -2.4
VPS39Q96JC1 RNU6-726P-201ENST00000364680 107 ntBASIC0.05□□□□□ -2.4
VPS39Q96JC1 Y_RNA.448-201ENST00000384185 108 ntBASIC0.05□□□□□ -2.4
VPS39Q96JC1 Y_RNA.489-201ENST00000384410 101 ntBASIC0.05□□□□□ -2.4
VPS39Q96JC1 RNU6-127P-201ENST00000390897 107 ntBASIC0.05□□□□□ -2.4
VPS39Q96JC1 Y_RNA.584-201ENST00000391090 114 ntBASIC0.05□□□□□ -2.4
VPS39Q96JC1 RNY4P20-201ENST00000516678 93 ntBASIC0.05□□□□□ -2.4
VPS39Q96JC1 RNU6-1271P-201ENST00000517049 105 ntBASIC0.05□□□□□ -2.4
VPS39Q96JC1 MIR4719-201ENST00000585233 84 ntBASIC0.05□□□□□ -2.4
VPS39Q96JC1 DNAJC19P2-201ENST00000593340 302 ntBASIC0.05□□□□□ -2.4
VPS39Q96JC1 AC072026.1-201ENST00000605023 201 ntBASIC0.05□□□□□ -2.4
VPS39Q96JC1 MIR6718-201ENST00000616153 80 ntBASIC0.05□□□□□ -2.4
VPS39Q96JC1 SNORA9.1-201ENST00000362412 131 ntBASIC0.04□□□□□ -2.4
VPS39Q96JC1 RNU6-682P-201ENST00000363843 106 ntBASIC0.04□□□□□ -2.4
VPS39Q96JC1 AL603914.1-201ENST00000401964 204 ntBASIC0.04□□□□□ -2.4
VPS39Q96JC1 BX276092.1-201ENST00000427368 251 ntBASIC0.04□□□□□ -2.4
VPS39Q96JC1 TRAJ51-201ENST00000504127 63 ntBASIC0.04□□□□□ -2.4
VPS39Q96JC1 RNU6-138P-201ENST00000515952 107 ntBASIC0.04□□□□□ -2.4
VPS39Q96JC1 MIR6779-201ENST00000617283 64 ntBASIC0.04□□□□□ -2.4
VPS39Q96JC1 Y_RNA.221-201ENST00000364248 96 ntBASIC0.03□□□□□ -2.4
VPS39Q96JC1 Y_RNA.240-201ENST00000364469 95 ntBASIC0.03□□□□□ -2.4
VPS39Q96JC1 SNORD18B-201ENST00000365659 72 ntBASIC0.03□□□□□ -2.4
VPS39Q96JC1 SNORA2A-201ENST00000383885 135 ntBASIC0.03□□□□□ -2.4
VPS39Q96JC1 RNU6-616P-201ENST00000384353 107 ntBASIC0.03□□□□□ -2.4
VPS39Q96JC1 RNU6-429P-201ENST00000384582 108 ntBASIC0.03□□□□□ -2.4
VPS39Q96JC1 MT-TI-201ENST00000387365 69 ntBASIC0.03□□□□□ -2.4
VPS39Q96JC1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.03□□□□□ -2.4
VPS39Q96JC1 AC244505.6-201ENST00000452829 130 ntBASIC0.03□□□□□ -2.4
VPS39Q96JC1 RNU7-104P-201ENST00000459398 79 ntBASIC0.03□□□□□ -2.4
VPS39Q96JC1 RPL39P34-201ENST00000477141 156 ntBASIC0.03□□□□□ -2.4
VPS39Q96JC1 AC098479.1-201ENST00000609225 154 ntBASIC0.03□□□□□ -2.4
VPS39Q96JC1 SNORA70.25-201ENST00000612741 95 ntBASIC0.03□□□□□ -2.4
VPS39Q96JC1 SNORD114-5-201ENST00000362928 70 ntBASIC0.02□□□□□ -2.41
VPS39Q96JC1 Y_RNA.188-201ENST00000363952 111 ntBASIC0.02□□□□□ -2.41
VPS39Q96JC1 RNU4-11P-201ENST00000365287 132 ntBASIC0.02□□□□□ -2.41
VPS39Q96JC1 RNU6-460P-201ENST00000391158 108 ntBASIC0.02□□□□□ -2.41
VPS39Q96JC1 RNA5SP63-201ENST00000391225 112 ntBASIC0.02□□□□□ -2.41
VPS39Q96JC1 RNU7-48P-201ENST00000458875 63 ntBASIC0.02□□□□□ -2.41
VPS39Q96JC1 RNA5SP330-201ENST00000517096 96 ntBASIC0.02□□□□□ -2.41
VPS39Q96JC1 IGKV1-22-201ENST00000524313 326 ntBASIC0.02□□□□□ -2.41
VPS39Q96JC1 AL137067.1-201ENST00000615933 120 ntBASIC0.02□□□□□ -2.41
VPS39Q96JC1 Y_RNA.258-201ENST00000364613 105 ntBASIC0.01□□□□□ -2.41
VPS39Q96JC1 RNU6-1318P-201ENST00000365389 103 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 374.6 ms