Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 Y_RNA.342-201ENST00000365352 113 ntBASIC1.33□□□□□ -2.2
PTCD3Q96EY7 Y_RNA.369-201ENST00000365568 117 ntBASIC1.33□□□□□ -2.2
PTCD3Q96EY7 RNU6-49P-201ENST00000384256 107 ntBASIC1.33□□□□□ -2.2
PTCD3Q96EY7 MT-TF-201ENST00000387314 71 ntBASIC1.33□□□□□ -2.2
PTCD3Q96EY7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
PTCD3Q96EY7 RNU6-644P-201ENST00000391155 98 ntBASIC1.33□□□□□ -2.2
PTCD3Q96EY7 SNORA17.3-201ENST00000391159 129 ntBASIC1.33□□□□□ -2.2
PTCD3Q96EY7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.33□□□□□ -2.2
PTCD3Q96EY7 AC109327.2-201ENST00000448339 378 ntBASIC1.33□□□□□ -2.2
PTCD3Q96EY7 Y_RNA.659-201ENST00000515994 113 ntBASIC1.33□□□□□ -2.2
PTCD3Q96EY7 AC138749.4-201ENST00000563970 127 ntBASIC1.33□□□□□ -2.2
PTCD3Q96EY7 ZNF209P-201ENST00000593450 2304 ntBASIC1.32□□□□□ -2.2
PTCD3Q96EY7 Y_RNA.4-201ENST00000362333 112 ntBASIC1.32□□□□□ -2.2
PTCD3Q96EY7 RNU6-1163P-201ENST00000364516 107 ntBASIC1.32□□□□□ -2.2
PTCD3Q96EY7 SNORD45B-201ENST00000364617 72 ntBASIC1.32□□□□□ -2.2
PTCD3Q96EY7 RNY1P2-201ENST00000364820 117 ntBASIC1.32□□□□□ -2.2
PTCD3Q96EY7 RNU6-1131P-201ENST00000364955 107 ntBASIC1.32□□□□□ -2.2
PTCD3Q96EY7 Y_RNA.467-201ENST00000384297 102 ntBASIC1.32□□□□□ -2.2
PTCD3Q96EY7 SNORA2B-201ENST00000384583 137 ntBASIC1.32□□□□□ -2.2
PTCD3Q96EY7 RPS29P28-201ENST00000446439 141 ntBASIC1.32□□□□□ -2.2
PTCD3Q96EY7 MIR18B-201ENST00000454574 71 ntBASIC1.32□□□□□ -2.2
PTCD3Q96EY7 RNU7-21P-201ENST00000459430 62 ntBASIC1.32□□□□□ -2.2
PTCD3Q96EY7 SNORD113.3-201ENST00000364630 78 ntBASIC1.31□□□□□ -2.2
PTCD3Q96EY7 RNU6-910P-201ENST00000390844 107 ntBASIC1.31□□□□□ -2.2
PTCD3Q96EY7 RNU7-61P-201ENST00000515897 61 ntBASIC1.31□□□□□ -2.2
PTCD3Q96EY7 AC133485.1-201ENST00000567176 124 ntBASIC1.31□□□□□ -2.2
PTCD3Q96EY7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.31□□□□□ -2.2
PTCD3Q96EY7 MALAT1.1-201ENST00000618249 95 ntBASIC1.31□□□□□ -2.2
PTCD3Q96EY7 AC012676.2-201ENST00000619258 186 ntBASIC1.31□□□□□ -2.2
PTCD3Q96EY7 AP001362.1-201ENST00000625165 124 ntBASIC1.31□□□□□ -2.2
PTCD3Q96EY7 MIR2052-201ENST00000636055 55 ntBASIC1.31□□□□□ -2.2
PTCD3Q96EY7 RNY1P7-201ENST00000384743 110 ntBASIC1.3□□□□□ -2.2
PTCD3Q96EY7 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
PTCD3Q96EY7 BTF3P4-201ENST00000418852 495 ntBASIC1.3□□□□□ -2.2
PTCD3Q96EY7 SNORD79.1-201ENST00000516069 84 ntBASIC1.3□□□□□ -2.2
PTCD3Q96EY7 RNU1-92P-201ENST00000517017 135 ntBASIC1.3□□□□□ -2.2
PTCD3Q96EY7 AC096720.1-201ENST00000604441 183 ntBASIC1.3□□□□□ -2.2
PTCD3Q96EY7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
PTCD3Q96EY7 AC008163.1-202ENST00000636004 2889 ntBASIC1.29□□□□□ -2.2
PTCD3Q96EY7 MIR337-201ENST00000362281 93 ntBASIC1.29□□□□□ -2.2
PTCD3Q96EY7 Y_RNA.164-201ENST00000363709 102 ntBASIC1.29□□□□□ -2.2
PTCD3Q96EY7 Y_RNA.290-201ENST00000364879 114 ntBASIC1.29□□□□□ -2.2
PTCD3Q96EY7 Y_RNA.588-201ENST00000391254 102 ntBASIC1.29□□□□□ -2.2
PTCD3Q96EY7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.29□□□□□ -2.2
PTCD3Q96EY7 MIR548G-201ENST00000408442 89 ntBASIC1.29□□□□□ -2.2
PTCD3Q96EY7 SNORD83.1-201ENST00000411362 77 ntBASIC1.29□□□□□ -2.2
PTCD3Q96EY7 AL591704.2-201ENST00000421658 181 ntBASIC1.29□□□□□ -2.2
PTCD3Q96EY7 AC023827.1-201ENST00000569247 97 ntBASIC1.29□□□□□ -2.2
PTCD3Q96EY7 MIR4491-201ENST00000581087 68 ntBASIC1.29□□□□□ -2.2
PTCD3Q96EY7 AL512598.1-201ENST00000610158 273 ntBASIC1.29□□□□□ -2.2
PTCD3Q96EY7 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.29□□□□□ -2.2
PTCD3Q96EY7 AC106800.4-201ENST00000614905 153 ntBASIC1.29□□□□□ -2.2
PTCD3Q96EY7 U6.109-201ENST00000636749 87 ntBASIC1.29□□□□□ -2.2
PTCD3Q96EY7 MIR4679-1-201ENST00000637619 75 ntBASIC1.29□□□□□ -2.2
PTCD3Q96EY7 HSBP1P2-201ENST00000299671 229 ntBASIC1.28□□□□□ -2.2
PTCD3Q96EY7 MIR26B-201ENST00000362251 77 ntBASIC1.28□□□□□ -2.2
PTCD3Q96EY7 RNA5SP133-201ENST00000363368 119 ntBASIC1.28□□□□□ -2.2
PTCD3Q96EY7 Y_RNA.173-201ENST00000363776 113 ntBASIC1.28□□□□□ -2.2
PTCD3Q96EY7 RNU1-36P-201ENST00000365130 165 ntBASIC1.28□□□□□ -2.2
PTCD3Q96EY7 SNORA80D-201ENST00000384488 135 ntBASIC1.28□□□□□ -2.2
PTCD3Q96EY7 RNU4-62P-201ENST00000410125 130 ntBASIC1.28□□□□□ -2.2
PTCD3Q96EY7 AC090897.1-201ENST00000580909 226 ntBASIC1.28□□□□□ -2.2
PTCD3Q96EY7 MIR4439-201ENST00000583746 80 ntBASIC1.28□□□□□ -2.2
PTCD3Q96EY7 RNU6-86P-201ENST00000606534 107 ntBASIC1.28□□□□□ -2.2
PTCD3Q96EY7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
PTCD3Q96EY7 Y_RNA.119-201ENST00000363301 96 ntBASIC1.27□□□□□ -2.21
PTCD3Q96EY7 SNORD26-201ENST00000384147 75 ntBASIC1.27□□□□□ -2.21
PTCD3Q96EY7 SNORD111-201ENST00000408139 94 ntBASIC1.27□□□□□ -2.21
PTCD3Q96EY7 RNA5SP247-201ENST00000411181 105 ntBASIC1.27□□□□□ -2.21
PTCD3Q96EY7 AP1B1P2-201ENST00000416196 106 ntBASIC1.27□□□□□ -2.21
PTCD3Q96EY7 AC015818.7-201ENST00000428754 109 ntBASIC1.27□□□□□ -2.21
PTCD3Q96EY7 AC087499.7-201ENST00000441958 109 ntBASIC1.27□□□□□ -2.21
PTCD3Q96EY7 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
PTCD3Q96EY7 RNU7-185P-201ENST00000459215 60 ntBASIC1.27□□□□□ -2.21
PTCD3Q96EY7 RNU6-90P-201ENST00000606352 106 ntBASIC1.27□□□□□ -2.21
PTCD3Q96EY7 U7.3-201ENST00000616123 62 ntBASIC1.27□□□□□ -2.21
PTCD3Q96EY7 RNY1P10-201ENST00000363268 113 ntBASIC1.26□□□□□ -2.21
PTCD3Q96EY7 RNU6-934P-201ENST00000365154 107 ntBASIC1.26□□□□□ -2.21
PTCD3Q96EY7 RNU6-813P-201ENST00000384691 107 ntBASIC1.26□□□□□ -2.21
PTCD3Q96EY7 SNORD93-201ENST00000408813 74 ntBASIC1.26□□□□□ -2.21
PTCD3Q96EY7 SPINT5P-201ENST00000448174 155 ntBASIC1.26□□□□□ -2.21
PTCD3Q96EY7 RNU6-162P-201ENST00000516228 103 ntBASIC1.26□□□□□ -2.21
PTCD3Q96EY7 SNORA25.16-201ENST00000516741 121 ntBASIC1.26□□□□□ -2.21
PTCD3Q96EY7 SNORA70.22-201ENST00000517160 124 ntBASIC1.26□□□□□ -2.21
PTCD3Q96EY7 MIR4500-201ENST00000579472 76 ntBASIC1.26□□□□□ -2.21
PTCD3Q96EY7 MIR4781-201ENST00000585250 76 ntBASIC1.26□□□□□ -2.21
PTCD3Q96EY7 AL359821.1-201ENST00000605519 182 ntBASIC1.26□□□□□ -2.21
PTCD3Q96EY7 AC020891.4-201ENST00000605745 93 ntBASIC1.26□□□□□ -2.21
PTCD3Q96EY7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
PTCD3Q96EY7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
PTCD3Q96EY7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
PTCD3Q96EY7 RNU6-369P-201ENST00000362515 102 ntBASIC1.25□□□□□ -2.21
PTCD3Q96EY7 RNU6-1244P-201ENST00000363614 108 ntBASIC1.25□□□□□ -2.21
PTCD3Q96EY7 Y_RNA.567-201ENST00000384736 106 ntBASIC1.25□□□□□ -2.21
PTCD3Q96EY7 RNU6-321P-201ENST00000410912 106 ntBASIC1.25□□□□□ -2.21
PTCD3Q96EY7 RNU7-90P-201ENST00000459216 62 ntBASIC1.25□□□□□ -2.21
PTCD3Q96EY7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.25□□□□□ -2.21
PTCD3Q96EY7 Y_RNA.705-201ENST00000516862 110 ntBASIC1.25□□□□□ -2.21
PTCD3Q96EY7 RNU6-844P-201ENST00000517175 102 ntBASIC1.25□□□□□ -2.21
PTCD3Q96EY7 MTND5P40-201ENST00000559945 246 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms