Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL442663.2-201ENST00000554385 511 ntBASIC-0.53□□□□□ -2.49
ECHDC3Q96DC8 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.53□□□□□ -2.49
ECHDC3Q96DC8 U2.14-201ENST00000615943 113 ntBASIC-0.53□□□□□ -2.49
ECHDC3Q96DC8 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.54□□□□□ -2.5
ECHDC3Q96DC8 RNU4-17P-201ENST00000365598 141 ntBASIC-0.54□□□□□ -2.5
ECHDC3Q96DC8 RNA5SP300-201ENST00000391197 107 ntBASIC-0.54□□□□□ -2.5
ECHDC3Q96DC8 SNORD57-201ENST00000448188 72 ntBASIC-0.54□□□□□ -2.5
ECHDC3Q96DC8 RNA5SP33-201ENST00000516687 98 ntBASIC-0.54□□□□□ -2.5
ECHDC3Q96DC8 RNU7-10P-201ENST00000607194 63 ntBASIC-0.54□□□□□ -2.5
ECHDC3Q96DC8 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.55□□□□□ -2.5
ECHDC3Q96DC8 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.55□□□□□ -2.5
ECHDC3Q96DC8 MIR548AX-201ENST00000580117 73 ntBASIC-0.55□□□□□ -2.5
ECHDC3Q96DC8 MTND4P29-201ENST00000503122 1372 ntBASIC-0.56□□□□□ -2.5
ECHDC3Q96DC8 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.56□□□□□ -2.5
ECHDC3Q96DC8 SNORA32-201ENST00000384072 121 ntBASIC-0.56□□□□□ -2.5
ECHDC3Q96DC8 RNY3P14-201ENST00000384309 102 ntBASIC-0.56□□□□□ -2.5
ECHDC3Q96DC8 SNORD110-201ENST00000408189 75 ntBASIC-0.56□□□□□ -2.5
ECHDC3Q96DC8 MTATP6P23-201ENST00000440153 476 ntBASIC-0.56□□□□□ -2.5
ECHDC3Q96DC8 MIR548S-201ENST00000581352 82 ntBASIC-0.56□□□□□ -2.5
ECHDC3Q96DC8 AC006504.6-201ENST00000590142 199 ntBASIC-0.56□□□□□ -2.5
ECHDC3Q96DC8 AL356055.1-201ENST00000602528 446 ntBASIC-0.56□□□□□ -2.5
ECHDC3Q96DC8 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.57□□□□□ -2.5
ECHDC3Q96DC8 RNU6-865P-201ENST00000364772 107 ntBASIC-0.57□□□□□ -2.5
ECHDC3Q96DC8 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.57□□□□□ -2.5
ECHDC3Q96DC8 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.57□□□□□ -2.5
ECHDC3Q96DC8 TRAJ51-201ENST00000504127 63 ntBASIC-0.57□□□□□ -2.5
ECHDC3Q96DC8 SNORA25.13-201ENST00000516395 103 ntBASIC-0.57□□□□□ -2.5
ECHDC3Q96DC8 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.57□□□□□ -2.5
ECHDC3Q96DC8 MIR4680-201ENST00000580906 66 ntBASIC-0.57□□□□□ -2.5
ECHDC3Q96DC8 MIR4744-201ENST00000581563 82 ntBASIC-0.57□□□□□ -2.5
ECHDC3Q96DC8 MIR548AE2-201ENST00000583456 67 ntBASIC-0.57□□□□□ -2.5
ECHDC3Q96DC8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.57□□□□□ -2.5
ECHDC3Q96DC8 AL391099.1-201ENST00000624635 187 ntBASIC-0.57□□□□□ -2.5
ECHDC3Q96DC8 MIR335-201ENST00000362173 94 ntBASIC-0.58□□□□□ -2.5
ECHDC3Q96DC8 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.58□□□□□ -2.5
ECHDC3Q96DC8 RNU6-509P-201ENST00000363519 107 ntBASIC-0.58□□□□□ -2.5
ECHDC3Q96DC8 RNU4-84P-201ENST00000364200 139 ntBASIC-0.58□□□□□ -2.5
ECHDC3Q96DC8 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.58□□□□□ -2.5
ECHDC3Q96DC8 RNU6-284P-201ENST00000411105 106 ntBASIC-0.58□□□□□ -2.5
ECHDC3Q96DC8 AC006210.1-201ENST00000424882 111 ntBASIC-0.58□□□□□ -2.5
ECHDC3Q96DC8 BX276092.1-201ENST00000427368 251 ntBASIC-0.58□□□□□ -2.5
ECHDC3Q96DC8 AL121914.1-201ENST00000450188 156 ntBASIC-0.58□□□□□ -2.5
ECHDC3Q96DC8 AC097635.1-201ENST00000450678 155 ntBASIC-0.58□□□□□ -2.5
ECHDC3Q96DC8 RNA5SP484-201ENST00000458857 111 ntBASIC-0.58□□□□□ -2.5
ECHDC3Q96DC8 MIR1270-201ENST00000459320 83 ntBASIC-0.58□□□□□ -2.5
ECHDC3Q96DC8 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.58□□□□□ -2.5
ECHDC3Q96DC8 AC105081.1-201ENST00000617727 106 ntBASIC-0.58□□□□□ -2.5
ECHDC3Q96DC8 MIR655-201ENST00000362159 97 ntBASIC-0.59□□□□□ -2.5
ECHDC3Q96DC8 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.59□□□□□ -2.5
ECHDC3Q96DC8 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.59□□□□□ -2.5
ECHDC3Q96DC8 MIR599-201ENST00000385069 95 ntBASIC-0.59□□□□□ -2.5
ECHDC3Q96DC8 MIR519A1-201ENST00000385257 85 ntBASIC-0.59□□□□□ -2.5
ECHDC3Q96DC8 RNA5SP236-201ENST00000516169 116 ntBASIC-0.59□□□□□ -2.5
ECHDC3Q96DC8 NAMPTP3-201ENST00000569273 224 ntBASIC-0.59□□□□□ -2.5
ECHDC3Q96DC8 AC084368.1-201ENST00000620935 65 ntBASIC-0.59□□□□□ -2.5
ECHDC3Q96DC8 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.6□□□□□ -2.51
ECHDC3Q96DC8 RNY1P9-201ENST00000532431 109 ntBASIC-0.6□□□□□ -2.51
ECHDC3Q96DC8 MIR3920-201ENST00000581751 86 ntBASIC-0.6□□□□□ -2.51
ECHDC3Q96DC8 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.6□□□□□ -2.51
ECHDC3Q96DC8 AC134503.1-201ENST00000633048 54 ntBASIC-0.6□□□□□ -2.51
ECHDC3Q96DC8 MIR409-201ENST00000362237 79 ntBASIC-0.61□□□□□ -2.51
ECHDC3Q96DC8 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.61□□□□□ -2.51
ECHDC3Q96DC8 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.61□□□□□ -2.51
ECHDC3Q96DC8 RNU6-578P-201ENST00000390980 103 ntBASIC-0.61□□□□□ -2.51
ECHDC3Q96DC8 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.61□□□□□ -2.51
ECHDC3Q96DC8 AL160413.1-201ENST00000622780 310 ntBASIC-0.61□□□□□ -2.51
ECHDC3Q96DC8 RNA5SP266-201ENST00000410273 108 ntBASIC-0.62□□□□□ -2.51
ECHDC3Q96DC8 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.62□□□□□ -2.51
ECHDC3Q96DC8 RNU2-35P-201ENST00000516446 142 ntBASIC-0.62□□□□□ -2.51
ECHDC3Q96DC8 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.62□□□□□ -2.51
ECHDC3Q96DC8 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.63□□□□□ -2.51
ECHDC3Q96DC8 RNU6-811P-201ENST00000384069 107 ntBASIC-0.63□□□□□ -2.51
ECHDC3Q96DC8 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.63□□□□□ -2.51
ECHDC3Q96DC8 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.63□□□□□ -2.51
ECHDC3Q96DC8 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.63□□□□□ -2.51
ECHDC3Q96DC8 MIR548I2-201ENST00000408348 149 ntBASIC-0.63□□□□□ -2.51
ECHDC3Q96DC8 AC022028.1-201ENST00000412054 408 ntBASIC-0.63□□□□□ -2.51
ECHDC3Q96DC8 AC244250.2-201ENST00000418731 148 ntBASIC-0.63□□□□□ -2.51
ECHDC3Q96DC8 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.63□□□□□ -2.51
ECHDC3Q96DC8 MIR6507-201ENST00000613630 70 ntBASIC-0.63□□□□□ -2.51
ECHDC3Q96DC8 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.63□□□□□ -2.51
ECHDC3Q96DC8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.63□□□□□ -2.51
ECHDC3Q96DC8 AL162726.3-218ENST00000636401 95 ntBASIC-0.63□□□□□ -2.51
ECHDC3Q96DC8 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.64□□□□□ -2.51
ECHDC3Q96DC8 SNORA25.7-201ENST00000364375 127 ntBASIC-0.64□□□□□ -2.51
ECHDC3Q96DC8 RNU6-643P-201ENST00000384018 107 ntBASIC-0.64□□□□□ -2.51
ECHDC3Q96DC8 MIR516B1-201ENST00000385211 90 ntBASIC-0.64□□□□□ -2.51
ECHDC3Q96DC8 MIR4643-201ENST00000577473 78 ntBASIC-0.64□□□□□ -2.51
ECHDC3Q96DC8 MIR548P-201ENST00000408336 84 ntBASIC-0.65□□□□□ -2.51
ECHDC3Q96DC8 SCARNA17-201ENST00000516183 144 ntBASIC-0.65□□□□□ -2.51
ECHDC3Q96DC8 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.66□□□□□ -2.52
ECHDC3Q96DC8 RNA5SP205-201ENST00000364653 136 ntBASIC-0.66□□□□□ -2.52
ECHDC3Q96DC8 RNY1P7-201ENST00000384743 110 ntBASIC-0.66□□□□□ -2.52
ECHDC3Q96DC8 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.66□□□□□ -2.52
ECHDC3Q96DC8 RNU6-985P-201ENST00000410182 104 ntBASIC-0.66□□□□□ -2.52
ECHDC3Q96DC8 RNU7-74P-201ENST00000459104 62 ntBASIC-0.66□□□□□ -2.52
ECHDC3Q96DC8 MIR4500-201ENST00000579472 76 ntBASIC-0.66□□□□□ -2.52
ECHDC3Q96DC8 MIR4801-201ENST00000582704 82 ntBASIC-0.66□□□□□ -2.52
ECHDC3Q96DC8 MIR4263-201ENST00000584745 83 ntBASIC-0.66□□□□□ -2.52
ECHDC3Q96DC8 AC011603.4-201ENST00000611325 277 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms