Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 Y_RNA.127-201ENST00000363386 109 ntBASIC1□□□□□ -2.25
TRIM43Q96BQ3 RNA5SP457-201ENST00000363657 124 ntBASIC1□□□□□ -2.25
TRIM43Q96BQ3 Y_RNA.178-201ENST00000363832 102 ntBASIC1□□□□□ -2.25
TRIM43Q96BQ3 RNU6-1187P-201ENST00000364771 110 ntBASIC1□□□□□ -2.25
TRIM43Q96BQ3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
TRIM43Q96BQ3 MIR520H-201ENST00000385126 88 ntBASIC1□□□□□ -2.25
TRIM43Q96BQ3 RNU1-119P-201ENST00000391122 165 ntBASIC1□□□□□ -2.25
TRIM43Q96BQ3 RNU4-61P-201ENST00000411243 107 ntBASIC1□□□□□ -2.25
TRIM43Q96BQ3 AC008267.6-201ENST00000441664 139 ntBASIC1□□□□□ -2.25
TRIM43Q96BQ3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
TRIM43Q96BQ3 RNU6-1333P-201ENST00000516162 93 ntBASIC1□□□□□ -2.25
TRIM43Q96BQ3 RNU7-137P-201ENST00000516788 62 ntBASIC1□□□□□ -2.25
TRIM43Q96BQ3 AC133485.1-201ENST00000567176 124 ntBASIC1□□□□□ -2.25
TRIM43Q96BQ3 AL590095.2-201ENST00000604136 117 ntBASIC1□□□□□ -2.25
TRIM43Q96BQ3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
TRIM43Q96BQ3 RNY4P6-201ENST00000363667 96 ntBASIC0.99□□□□□ -2.25
TRIM43Q96BQ3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.99□□□□□ -2.25
TRIM43Q96BQ3 SNORA72.6-201ENST00000384520 129 ntBASIC0.99□□□□□ -2.25
TRIM43Q96BQ3 Y_RNA.630-201ENST00000411370 108 ntBASIC0.99□□□□□ -2.25
TRIM43Q96BQ3 MIR1270-201ENST00000459320 83 ntBASIC0.99□□□□□ -2.25
TRIM43Q96BQ3 RNU6-659P-201ENST00000516454 104 ntBASIC0.99□□□□□ -2.25
TRIM43Q96BQ3 RNU6-789P-201ENST00000517105 102 ntBASIC0.99□□□□□ -2.25
TRIM43Q96BQ3 MIR6513-201ENST00000621188 64 ntBASIC0.99□□□□□ -2.25
TRIM43Q96BQ3 U6.95-201ENST00000636931 70 ntBASIC0.99□□□□□ -2.25
TRIM43Q96BQ3 MIR3914-2-201ENST00000637339 95 ntBASIC0.99□□□□□ -2.25
TRIM43Q96BQ3 Y_RNA.525-201ENST00000384570 113 ntBASIC0.98□□□□□ -2.25
TRIM43Q96BQ3 MT-TI-201ENST00000387365 69 ntBASIC0.98□□□□□ -2.25
TRIM43Q96BQ3 SNORD92-201ENST00000585078 85 ntBASIC0.98□□□□□ -2.25
TRIM43Q96BQ3 AL359881.1-201ENST00000602916 267 ntBASIC0.98□□□□□ -2.25
TRIM43Q96BQ3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.98□□□□□ -2.25
TRIM43Q96BQ3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TRIM43Q96BQ3 RNU6-616P-201ENST00000384353 107 ntBASIC0.97□□□□□ -2.25
TRIM43Q96BQ3 RNU6-1117P-201ENST00000384525 104 ntBASIC0.97□□□□□ -2.25
TRIM43Q96BQ3 RNU7-56P-201ENST00000458744 62 ntBASIC0.97□□□□□ -2.25
TRIM43Q96BQ3 RNU6-62P-201ENST00000516526 102 ntBASIC0.97□□□□□ -2.25
TRIM43Q96BQ3 MIR4491-201ENST00000581087 68 ntBASIC0.97□□□□□ -2.25
TRIM43Q96BQ3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.97□□□□□ -2.25
TRIM43Q96BQ3 AC105081.1-201ENST00000617727 106 ntBASIC0.97□□□□□ -2.25
TRIM43Q96BQ3 AC087741.2-201ENST00000619415 172 ntBASIC0.97□□□□□ -2.25
TRIM43Q96BQ3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.96□□□□□ -2.26
TRIM43Q96BQ3 MIR206-201ENST00000384872 86 ntBASIC0.96□□□□□ -2.26
TRIM43Q96BQ3 MIR548D2-201ENST00000384955 97 ntBASIC0.96□□□□□ -2.26
TRIM43Q96BQ3 MIR936-201ENST00000401264 98 ntBASIC0.96□□□□□ -2.26
TRIM43Q96BQ3 SNORD99-201ENST00000408612 74 ntBASIC0.96□□□□□ -2.26
TRIM43Q96BQ3 RNU7-102P-201ENST00000458948 62 ntBASIC0.96□□□□□ -2.26
TRIM43Q96BQ3 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
TRIM43Q96BQ3 RNU7-2P-201ENST00000516096 62 ntBASIC0.96□□□□□ -2.26
TRIM43Q96BQ3 DEFB131E-201ENST00000532329 154 ntBASIC0.96□□□□□ -2.26
TRIM43Q96BQ3 SNORD115-19-201ENST00000363098 82 ntBASIC0.95□□□□□ -2.26
TRIM43Q96BQ3 SNORD115-18-201ENST00000363293 82 ntBASIC0.95□□□□□ -2.26
TRIM43Q96BQ3 SNORD115-17-201ENST00000364612 82 ntBASIC0.95□□□□□ -2.26
TRIM43Q96BQ3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
TRIM43Q96BQ3 Y_RNA.448-201ENST00000384185 108 ntBASIC0.95□□□□□ -2.26
TRIM43Q96BQ3 Y_RNA.588-201ENST00000391254 102 ntBASIC0.95□□□□□ -2.26
TRIM43Q96BQ3 RNU6-735P-201ENST00000410612 107 ntBASIC0.95□□□□□ -2.26
TRIM43Q96BQ3 AC004941.2-201ENST00000427009 228 ntBASIC0.95□□□□□ -2.26
TRIM43Q96BQ3 MIR6082-201ENST00000613604 109 ntBASIC0.95□□□□□ -2.26
TRIM43Q96BQ3 U6.109-201ENST00000636749 87 ntBASIC0.95□□□□□ -2.26
TRIM43Q96BQ3 Y_RNA.13-201ENST00000362403 112 ntBASIC0.94□□□□□ -2.26
TRIM43Q96BQ3 RNA5SP133-201ENST00000363368 119 ntBASIC0.94□□□□□ -2.26
TRIM43Q96BQ3 AC096949.1-201ENST00000412047 152 ntBASIC0.94□□□□□ -2.26
TRIM43Q96BQ3 Y_RNA.649-201ENST00000459077 103 ntBASIC0.94□□□□□ -2.26
TRIM43Q96BQ3 RNA5SP330-201ENST00000517096 96 ntBASIC0.94□□□□□ -2.26
TRIM43Q96BQ3 AL353765.1-201ENST00000605514 183 ntBASIC0.94□□□□□ -2.26
TRIM43Q96BQ3 MIR8066-201ENST00000617280 78 ntBASIC0.94□□□□□ -2.26
TRIM43Q96BQ3 Y_RNA.258-201ENST00000364613 105 ntBASIC0.93□□□□□ -2.26
TRIM43Q96BQ3 RNU6-865P-201ENST00000364772 107 ntBASIC0.93□□□□□ -2.26
TRIM43Q96BQ3 MIR548A3-201ENST00000385297 97 ntBASIC0.93□□□□□ -2.26
TRIM43Q96BQ3 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
TRIM43Q96BQ3 SNORD33.1-201ENST00000516213 88 ntBASIC0.93□□□□□ -2.26
TRIM43Q96BQ3 AC011195.1-201ENST00000578177 177 ntBASIC0.93□□□□□ -2.26
TRIM43Q96BQ3 AL365222.1-201ENST00000614661 98 ntBASIC0.93□□□□□ -2.26
TRIM43Q96BQ3 Y_RNA.42-201ENST00000362660 108 ntBASIC0.92□□□□□ -2.26
TRIM43Q96BQ3 Y_RNA.98-201ENST00000363109 102 ntBASIC0.92□□□□□ -2.26
TRIM43Q96BQ3 RNU4-58P-201ENST00000363192 141 ntBASIC0.92□□□□□ -2.26
TRIM43Q96BQ3 Y_RNA.261-201ENST00000364631 102 ntBASIC0.92□□□□□ -2.26
TRIM43Q96BQ3 SNORD115-35-201ENST00000365122 82 ntBASIC0.92□□□□□ -2.26
TRIM43Q96BQ3 MIR608-201ENST00000384820 100 ntBASIC0.92□□□□□ -2.26
TRIM43Q96BQ3 RNU6-1321P-201ENST00000390905 107 ntBASIC0.92□□□□□ -2.26
TRIM43Q96BQ3 RNU7-48P-201ENST00000458875 63 ntBASIC0.92□□□□□ -2.26
TRIM43Q96BQ3 Y_RNA.681-201ENST00000516445 113 ntBASIC0.92□□□□□ -2.26
TRIM43Q96BQ3 SNORA25.16-201ENST00000516741 121 ntBASIC0.92□□□□□ -2.26
TRIM43Q96BQ3 RNU6-765P-201ENST00000516916 99 ntBASIC0.92□□□□□ -2.26
TRIM43Q96BQ3 AC008608.1-201ENST00000603910 127 ntBASIC0.92□□□□□ -2.26
TRIM43Q96BQ3 AL670379.3-201ENST00000605040 251 ntBASIC0.92□□□□□ -2.26
TRIM43Q96BQ3 SNORD114-23-201ENST00000363536 72 ntBASIC0.91□□□□□ -2.26
TRIM43Q96BQ3 RNY1P2-201ENST00000364820 117 ntBASIC0.91□□□□□ -2.26
TRIM43Q96BQ3 RNU6-22P-201ENST00000384355 107 ntBASIC0.91□□□□□ -2.26
TRIM43Q96BQ3 MIR573-201ENST00000384964 99 ntBASIC0.91□□□□□ -2.26
TRIM43Q96BQ3 AP003327.1-201ENST00000529684 127 ntBASIC0.91□□□□□ -2.26
TRIM43Q96BQ3 AC138749.4-201ENST00000563970 127 ntBASIC0.91□□□□□ -2.26
TRIM43Q96BQ3 AC138907.6-201ENST00000568401 126 ntBASIC0.91□□□□□ -2.26
TRIM43Q96BQ3 AC090897.1-201ENST00000580909 226 ntBASIC0.91□□□□□ -2.26
TRIM43Q96BQ3 Y_RNA.773-201ENST00000607168 90 ntBASIC0.91□□□□□ -2.26
TRIM43Q96BQ3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TRIM43Q96BQ3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
TRIM43Q96BQ3 RNA5SP193-201ENST00000410353 107 ntBASIC0.9□□□□□ -2.27
TRIM43Q96BQ3 RNU6-448P-201ENST00000517052 107 ntBASIC0.9□□□□□ -2.27
TRIM43Q96BQ3 AC010487.4-201ENST00000637027 61 ntBASIC0.9□□□□□ -2.27
TRIM43Q96BQ3 MIR924-201ENST00000638017 53 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 219.1 ms