Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 Y_RNA.218-201ENST00000364218 104 ntBASIC0.97□□□□□ -2.25
HPS3Q969F9 MIR532-201ENST00000385025 91 ntBASIC0.97□□□□□ -2.25
HPS3Q969F9 Y_RNA.588-201ENST00000391254 102 ntBASIC0.97□□□□□ -2.25
HPS3Q969F9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.97□□□□□ -2.25
HPS3Q969F9 AC011195.1-201ENST00000578177 177 ntBASIC0.97□□□□□ -2.25
HPS3Q969F9 AL359881.1-201ENST00000602916 267 ntBASIC0.97□□□□□ -2.25
HPS3Q969F9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.97□□□□□ -2.25
HPS3Q969F9 MIR6082-201ENST00000613604 109 ntBASIC0.97□□□□□ -2.25
HPS3Q969F9 AC087741.2-201ENST00000619415 172 ntBASIC0.97□□□□□ -2.25
HPS3Q969F9 SNORD116-14-201ENST00000383894 92 ntBASIC0.96□□□□□ -2.26
HPS3Q969F9 SNORD116-17-201ENST00000383929 92 ntBASIC0.96□□□□□ -2.26
HPS3Q969F9 RNU6-616P-201ENST00000384353 107 ntBASIC0.96□□□□□ -2.26
HPS3Q969F9 SNORD116-15-201ENST00000384445 92 ntBASIC0.96□□□□□ -2.26
HPS3Q969F9 SNORD116-19-201ENST00000384729 92 ntBASIC0.96□□□□□ -2.26
HPS3Q969F9 MT-TI-201ENST00000387365 69 ntBASIC0.96□□□□□ -2.26
HPS3Q969F9 RNU7-2P-201ENST00000516096 62 ntBASIC0.96□□□□□ -2.26
HPS3Q969F9 RNU6-765P-201ENST00000516916 99 ntBASIC0.96□□□□□ -2.26
HPS3Q969F9 Y_RNA.712-201ENST00000517011 92 ntBASIC0.96□□□□□ -2.26
HPS3Q969F9 AC090897.1-201ENST00000580909 226 ntBASIC0.96□□□□□ -2.26
HPS3Q969F9 MIR4653-201ENST00000585107 83 ntBASIC0.96□□□□□ -2.26
HPS3Q969F9 AC105081.1-201ENST00000617727 106 ntBASIC0.96□□□□□ -2.26
HPS3Q969F9 AC132825.6-201ENST00000638861 357 ntBASIC0.96□□□□□ -2.26
HPS3Q969F9 Y_RNA.13-201ENST00000362403 112 ntBASIC0.95□□□□□ -2.26
HPS3Q969F9 SNORD115-19-201ENST00000363098 82 ntBASIC0.95□□□□□ -2.26
HPS3Q969F9 SNORD115-18-201ENST00000363293 82 ntBASIC0.95□□□□□ -2.26
HPS3Q969F9 RNA5SP133-201ENST00000363368 119 ntBASIC0.95□□□□□ -2.26
HPS3Q969F9 SNORD115-17-201ENST00000364612 82 ntBASIC0.95□□□□□ -2.26
HPS3Q969F9 MIR206-201ENST00000384872 86 ntBASIC0.95□□□□□ -2.26
HPS3Q969F9 MIR573-201ENST00000384964 99 ntBASIC0.95□□□□□ -2.26
HPS3Q969F9 AC096949.1-201ENST00000412047 152 ntBASIC0.95□□□□□ -2.26
HPS3Q969F9 RNU6-659P-201ENST00000516454 104 ntBASIC0.95□□□□□ -2.26
HPS3Q969F9 RNU6-448P-201ENST00000517052 107 ntBASIC0.95□□□□□ -2.26
HPS3Q969F9 MIR3910-1-201ENST00000580936 111 ntBASIC0.95□□□□□ -2.26
HPS3Q969F9 MIR8066-201ENST00000617280 78 ntBASIC0.95□□□□□ -2.26
HPS3Q969F9 U6.109-201ENST00000636749 87 ntBASIC0.95□□□□□ -2.26
HPS3Q969F9 U6.95-201ENST00000636931 70 ntBASIC0.95□□□□□ -2.26
HPS3Q969F9 HSBP1P2-201ENST00000299671 229 ntBASIC0.94□□□□□ -2.26
HPS3Q969F9 Y_RNA.42-201ENST00000362660 108 ntBASIC0.94□□□□□ -2.26
HPS3Q969F9 Y_RNA.98-201ENST00000363109 102 ntBASIC0.94□□□□□ -2.26
HPS3Q969F9 RNU4-58P-201ENST00000363192 141 ntBASIC0.94□□□□□ -2.26
HPS3Q969F9 Y_RNA.127-201ENST00000363386 109 ntBASIC0.94□□□□□ -2.26
HPS3Q969F9 MIR548D2-201ENST00000384955 97 ntBASIC0.94□□□□□ -2.26
HPS3Q969F9 Y_RNA.630-201ENST00000411370 108 ntBASIC0.94□□□□□ -2.26
HPS3Q969F9 AC008267.6-201ENST00000441664 139 ntBASIC0.94□□□□□ -2.26
HPS3Q969F9 AP003327.1-201ENST00000529684 127 ntBASIC0.94□□□□□ -2.26
HPS3Q969F9 CYP3A137P-201ENST00000562436 69 ntBASIC0.94□□□□□ -2.26
HPS3Q969F9 AC008608.1-201ENST00000603910 127 ntBASIC0.94□□□□□ -2.26
HPS3Q969F9 MIR3914-2-201ENST00000637339 95 ntBASIC0.94□□□□□ -2.26
HPS3Q969F9 RNU6-865P-201ENST00000364772 107 ntBASIC0.93□□□□□ -2.26
HPS3Q969F9 RNY1P2-201ENST00000364820 117 ntBASIC0.93□□□□□ -2.26
HPS3Q969F9 SNORD115-35-201ENST00000365122 82 ntBASIC0.93□□□□□ -2.26
HPS3Q969F9 Y_RNA.448-201ENST00000384185 108 ntBASIC0.93□□□□□ -2.26
HPS3Q969F9 AC244098.3-201ENST00000424803 96 ntBASIC0.93□□□□□ -2.26
HPS3Q969F9 RNU7-48P-201ENST00000458875 63 ntBASIC0.93□□□□□ -2.26
HPS3Q969F9 RNU6-1333P-201ENST00000516162 93 ntBASIC0.93□□□□□ -2.26
HPS3Q969F9 RNU6-1321P-201ENST00000390905 107 ntBASIC0.92□□□□□ -2.26
HPS3Q969F9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.92□□□□□ -2.26
HPS3Q969F9 PSMC1P5-201ENST00000512850 177 ntBASIC0.92□□□□□ -2.26
HPS3Q969F9 RNU6-1194P-201ENST00000516208 104 ntBASIC0.92□□□□□ -2.26
HPS3Q969F9 SNORA25.16-201ENST00000516741 121 ntBASIC0.92□□□□□ -2.26
HPS3Q969F9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.92□□□□□ -2.26
HPS3Q969F9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
HPS3Q969F9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
HPS3Q969F9 RNA5SP117-201ENST00000365294 118 ntBASIC0.91□□□□□ -2.26
HPS3Q969F9 RNU4-45P-201ENST00000365469 141 ntBASIC0.91□□□□□ -2.26
HPS3Q969F9 RNU6-110P-201ENST00000384508 104 ntBASIC0.91□□□□□ -2.26
HPS3Q969F9 RNU6-1117P-201ENST00000384525 104 ntBASIC0.91□□□□□ -2.26
HPS3Q969F9 Y_RNA.525-201ENST00000384570 113 ntBASIC0.91□□□□□ -2.26
HPS3Q969F9 RNU6-735P-201ENST00000410612 107 ntBASIC0.91□□□□□ -2.26
HPS3Q969F9 RNU6-62P-201ENST00000516526 102 ntBASIC0.91□□□□□ -2.26
HPS3Q969F9 RNU6-789P-201ENST00000517105 102 ntBASIC0.91□□□□□ -2.26
HPS3Q969F9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.91□□□□□ -2.26
HPS3Q969F9 AC138749.4-201ENST00000563970 127 ntBASIC0.91□□□□□ -2.26
HPS3Q969F9 Y_RNA.119-201ENST00000363301 96 ntBASIC0.9□□□□□ -2.27
HPS3Q969F9 MIR605-201ENST00000385078 83 ntBASIC0.9□□□□□ -2.27
HPS3Q969F9 MIR146A-201ENST00000385201 99 ntBASIC0.9□□□□□ -2.27
HPS3Q969F9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
HPS3Q969F9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
HPS3Q969F9 Y_RNA.649-201ENST00000459077 103 ntBASIC0.9□□□□□ -2.27
HPS3Q969F9 RNU6-531P-201ENST00000516694 104 ntBASIC0.9□□□□□ -2.27
HPS3Q969F9 MIR3612-201ENST00000579753 87 ntBASIC0.9□□□□□ -2.27
HPS3Q969F9 RN7SL793P-201ENST00000583259 296 ntBASIC0.9□□□□□ -2.27
HPS3Q969F9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
HPS3Q969F9 MIR101-2-201ENST00000362195 79 ntBASIC0.89□□□□□ -2.27
HPS3Q969F9 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
HPS3Q969F9 Y_RNA.328-201ENST00000365208 113 ntBASIC0.89□□□□□ -2.27
HPS3Q969F9 MIR216A-201ENST00000385063 110 ntBASIC0.89□□□□□ -2.27
HPS3Q969F9 MIR548A3-201ENST00000385297 97 ntBASIC0.89□□□□□ -2.27
HPS3Q969F9 SNORD100-201ENST00000408573 76 ntBASIC0.89□□□□□ -2.27
HPS3Q969F9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.89□□□□□ -2.27
HPS3Q969F9 RNA5SP222-201ENST00000411039 105 ntBASIC0.89□□□□□ -2.27
HPS3Q969F9 AC002350.1-201ENST00000490759 375 ntBASIC0.89□□□□□ -2.27
HPS3Q969F9 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
HPS3Q969F9 Y_RNA.697-201ENST00000516776 113 ntBASIC0.89□□□□□ -2.27
HPS3Q969F9 Y_RNA.773-201ENST00000607168 90 ntBASIC0.89□□□□□ -2.27
HPS3Q969F9 AP001362.1-201ENST00000625165 124 ntBASIC0.89□□□□□ -2.27
HPS3Q969F9 Y_RNA.507-201ENST00000384500 99 ntBASIC0.88□□□□□ -2.27
HPS3Q969F9 RNU6-429P-201ENST00000384582 108 ntBASIC0.88□□□□□ -2.27
HPS3Q969F9 RNU6-521P-201ENST00000516663 105 ntBASIC0.88□□□□□ -2.27
HPS3Q969F9 AC013244.2-201ENST00000603396 103 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms