Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RPS29P28-201ENST00000446439 141 ntBASIC1.14□□□□□ -2.23
ATG4AQ8WYN0 RNU7-48P-201ENST00000458875 63 ntBASIC1.14□□□□□ -2.23
ATG4AQ8WYN0 RNU6-1018P-201ENST00000516577 106 ntBASIC1.14□□□□□ -2.23
ATG4AQ8WYN0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
ATG4AQ8WYN0 RNU6-1313P-201ENST00000362622 102 ntBASIC1.13□□□□□ -2.23
ATG4AQ8WYN0 Y_RNA.116-201ENST00000363292 103 ntBASIC1.13□□□□□ -2.23
ATG4AQ8WYN0 Y_RNA.163-201ENST00000363702 113 ntBASIC1.13□□□□□ -2.23
ATG4AQ8WYN0 SNORA25.9-201ENST00000365087 128 ntBASIC1.13□□□□□ -2.23
ATG4AQ8WYN0 Y_RNA.360-201ENST00000365512 102 ntBASIC1.13□□□□□ -2.23
ATG4AQ8WYN0 AC015818.7-201ENST00000428754 109 ntBASIC1.13□□□□□ -2.23
ATG4AQ8WYN0 AC087499.7-201ENST00000441958 109 ntBASIC1.13□□□□□ -2.23
ATG4AQ8WYN0 AC067940.1-201ENST00000458411 300 ntBASIC1.13□□□□□ -2.23
ATG4AQ8WYN0 uc_338.28-201ENST00000612082 187 ntBASIC1.13□□□□□ -2.23
ATG4AQ8WYN0 RNU6-369P-201ENST00000362515 102 ntBASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 SNORA63.4-201ENST00000362763 126 ntBASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 Y_RNA.81-201ENST00000362997 102 ntBASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 Y_RNA.98-201ENST00000363109 102 ntBASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 RNY1P2-201ENST00000364820 117 ntBASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 Y_RNA.328-201ENST00000365208 113 ntBASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 RNU6-106P-201ENST00000384405 107 ntBASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 MIR605-201ENST00000385078 83 ntBASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 MIR1287-201ENST00000408492 90 ntBASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 RNA5SP404-201ENST00000517118 132 ntBASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 AC138749.4-201ENST00000563970 127 ntBASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 MIR4694-201ENST00000578534 80 ntBASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 AC020891.4-201ENST00000605745 93 ntBASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 MIR376B-201ENST00000614515 100 ntBASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
ATG4AQ8WYN0 MIR1-1-201ENST00000362147 71 ntBASIC1.11□□□□□ -2.23
ATG4AQ8WYN0 MIR200A-201ENST00000384875 90 ntBASIC1.11□□□□□ -2.23
ATG4AQ8WYN0 MIR125B2-201ENST00000385128 89 ntBASIC1.11□□□□□ -2.23
ATG4AQ8WYN0 Y_RNA.588-201ENST00000391254 102 ntBASIC1.11□□□□□ -2.23
ATG4AQ8WYN0 MIR1302-5-201ENST00000408164 150 ntBASIC1.11□□□□□ -2.23
ATG4AQ8WYN0 MIR1827-201ENST00000408549 66 ntBASIC1.11□□□□□ -2.23
ATG4AQ8WYN0 RNU6-554P-201ENST00000410466 106 ntBASIC1.11□□□□□ -2.23
ATG4AQ8WYN0 MIR4491-201ENST00000581087 68 ntBASIC1.11□□□□□ -2.23
ATG4AQ8WYN0 MIR4676-201ENST00000583078 72 ntBASIC1.11□□□□□ -2.23
ATG4AQ8WYN0 AP001362.1-201ENST00000625165 124 ntBASIC1.11□□□□□ -2.23
ATG4AQ8WYN0 U6.109-201ENST00000636749 87 ntBASIC1.11□□□□□ -2.23
ATG4AQ8WYN0 AL512310.12-203ENST00000640543 90 ntBASIC1.11□□□□□ -2.23
ATG4AQ8WYN0 RNA5SP133-201ENST00000363368 119 ntBASIC1.1□□□□□ -2.23
ATG4AQ8WYN0 RNU6-1201P-201ENST00000384227 107 ntBASIC1.1□□□□□ -2.23
ATG4AQ8WYN0 MIR34C-201ENST00000384831 77 ntBASIC1.1□□□□□ -2.23
ATG4AQ8WYN0 MIR499A-201ENST00000384903 122 ntBASIC1.1□□□□□ -2.23
ATG4AQ8WYN0 MIR577-201ENST00000385196 96 ntBASIC1.1□□□□□ -2.23
ATG4AQ8WYN0 MIR100-201ENST00000385259 80 ntBASIC1.1□□□□□ -2.23
ATG4AQ8WYN0 MIR618-201ENST00000385287 98 ntBASIC1.1□□□□□ -2.23
ATG4AQ8WYN0 RNU4-83P-201ENST00000410863 133 ntBASIC1.1□□□□□ -2.23
ATG4AQ8WYN0 FABP5P4-201ENST00000437203 171 ntBASIC1.1□□□□□ -2.23
ATG4AQ8WYN0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.1□□□□□ -2.23
ATG4AQ8WYN0 PDCD5P2-201ENST00000507570 312 ntBASIC1.1□□□□□ -2.23
ATG4AQ8WYN0 SNORD114-21-201ENST00000606412 72 ntBASIC1.1□□□□□ -2.23
ATG4AQ8WYN0 RNY3P2-201ENST00000362918 102 ntBASIC1.09□□□□□ -2.23
ATG4AQ8WYN0 Y_RNA.377-201ENST00000365644 108 ntBASIC1.09□□□□□ -2.23
ATG4AQ8WYN0 RNU6-939P-201ENST00000384634 107 ntBASIC1.09□□□□□ -2.23
ATG4AQ8WYN0 SNORD124-201ENST00000459577 104 ntBASIC1.09□□□□□ -2.23
ATG4AQ8WYN0 Y_RNA.78-201ENST00000362970 110 ntBASIC1.08□□□□□ -2.24
ATG4AQ8WYN0 RNU6-403P-201ENST00000363163 104 ntBASIC1.08□□□□□ -2.24
ATG4AQ8WYN0 RNU6-53P-201ENST00000365367 106 ntBASIC1.08□□□□□ -2.24
ATG4AQ8WYN0 UBL5P1-201ENST00000507979 193 ntBASIC1.08□□□□□ -2.24
ATG4AQ8WYN0 MIR4804-201ENST00000581683 73 ntBASIC1.08□□□□□ -2.24
ATG4AQ8WYN0 RNU6-832P-201ENST00000363319 107 ntBASIC1.07□□□□□ -2.24
ATG4AQ8WYN0 RNU6-1099P-201ENST00000363533 107 ntBASIC1.07□□□□□ -2.24
ATG4AQ8WYN0 SNORA72.6-201ENST00000384520 129 ntBASIC1.07□□□□□ -2.24
ATG4AQ8WYN0 MIR942-201ENST00000401111 86 ntBASIC1.07□□□□□ -2.24
ATG4AQ8WYN0 MIR938-201ENST00000401216 83 ntBASIC1.07□□□□□ -2.24
ATG4AQ8WYN0 AL031737.1-201ENST00000450125 223 ntBASIC1.07□□□□□ -2.24
ATG4AQ8WYN0 RNU6-977P-201ENST00000516411 103 ntBASIC1.07□□□□□ -2.24
ATG4AQ8WYN0 RNU6-1110P-201ENST00000516462 101 ntBASIC1.07□□□□□ -2.24
ATG4AQ8WYN0 SNORA25.16-201ENST00000516741 121 ntBASIC1.07□□□□□ -2.24
ATG4AQ8WYN0 RNU6-1006P-201ENST00000516998 103 ntBASIC1.07□□□□□ -2.24
ATG4AQ8WYN0 SNORD92-201ENST00000585078 85 ntBASIC1.07□□□□□ -2.24
ATG4AQ8WYN0 AL136317.1-201ENST00000612653 226 ntBASIC1.07□□□□□ -2.24
ATG4AQ8WYN0 AL442128.1-201ENST00000615151 90 ntBASIC1.07□□□□□ -2.24
ATG4AQ8WYN0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 RNU6-766P-201ENST00000362478 107 ntBASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 RNU4-58P-201ENST00000363192 141 ntBASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 Y_RNA.119-201ENST00000363301 96 ntBASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 RNU4-36P-201ENST00000364294 144 ntBASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 SNORD114-24-201ENST00000365029 72 ntBASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 RNU6-1113P-201ENST00000384348 107 ntBASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 RNU6-364P-201ENST00000384387 107 ntBASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 SNORD38.2-201ENST00000384470 69 ntBASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 U7.7-201ENST00000459276 60 ntBASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 RNU7-156P-201ENST00000517214 74 ntBASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 DEFB131E-201ENST00000532329 154 ntBASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 AC141557.1-201ENST00000540982 400 ntBASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 MIR6082-201ENST00000613604 109 ntBASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 MIR8066-201ENST00000617280 78 ntBASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
ATG4AQ8WYN0 Y_RNA.13-201ENST00000362403 112 ntBASIC1.05□□□□□ -2.24
ATG4AQ8WYN0 Y_RNA.42-201ENST00000362660 108 ntBASIC1.05□□□□□ -2.24
ATG4AQ8WYN0 SNORD38.1-201ENST00000363863 68 ntBASIC1.05□□□□□ -2.24
ATG4AQ8WYN0 RNU6-756P-201ENST00000383997 107 ntBASIC1.05□□□□□ -2.24
ATG4AQ8WYN0 SNORA51.5-201ENST00000384126 131 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 213.4 ms