Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 Y_RNA.198-201ENST00000364013 98 ntBASIC0.64□□□□□ -2.31
RAB40AQ8WXH6 MIR539-201ENST00000365690 78 ntBASIC0.64□□□□□ -2.31
RAB40AQ8WXH6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
RAB40AQ8WXH6 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.64□□□□□ -2.31
RAB40AQ8WXH6 RNU6-1194P-201ENST00000516208 104 ntBASIC0.64□□□□□ -2.31
RAB40AQ8WXH6 RNU6-469P-201ENST00000516253 101 ntBASIC0.64□□□□□ -2.31
RAB40AQ8WXH6 RNU6-531P-201ENST00000516694 104 ntBASIC0.64□□□□□ -2.31
RAB40AQ8WXH6 MIR3133-201ENST00000583157 78 ntBASIC0.64□□□□□ -2.31
RAB40AQ8WXH6 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
RAB40AQ8WXH6 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.64□□□□□ -2.31
RAB40AQ8WXH6 RNU6-616P-201ENST00000384353 107 ntBASIC0.63□□□□□ -2.31
RAB40AQ8WXH6 Y_RNA.528-201ENST00000384575 108 ntBASIC0.63□□□□□ -2.31
RAB40AQ8WXH6 Y_RNA.536-201ENST00000384621 113 ntBASIC0.63□□□□□ -2.31
RAB40AQ8WXH6 MIR206-201ENST00000384872 86 ntBASIC0.63□□□□□ -2.31
RAB40AQ8WXH6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.63□□□□□ -2.31
RAB40AQ8WXH6 RNU6-781P-201ENST00000516377 101 ntBASIC0.63□□□□□ -2.31
RAB40AQ8WXH6 RNU6-1061P-201ENST00000516530 99 ntBASIC0.63□□□□□ -2.31
RAB40AQ8WXH6 MTND5P34-201ENST00000568888 325 ntBASIC0.63□□□□□ -2.31
RAB40AQ8WXH6 MIR5000-201ENST00000577717 103 ntBASIC0.63□□□□□ -2.31
RAB40AQ8WXH6 AC022709.1-201ENST00000615967 87 ntBASIC0.63□□□□□ -2.31
RAB40AQ8WXH6 MIR6835-201ENST00000621552 64 ntBASIC0.63□□□□□ -2.31
RAB40AQ8WXH6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
RAB40AQ8WXH6 Y_RNA.119-201ENST00000363301 96 ntBASIC0.62□□□□□ -2.31
RAB40AQ8WXH6 RNY1P2-201ENST00000364820 117 ntBASIC0.62□□□□□ -2.31
RAB40AQ8WXH6 Y_RNA.448-201ENST00000384185 108 ntBASIC0.62□□□□□ -2.31
RAB40AQ8WXH6 RNU6-1321P-201ENST00000390905 107 ntBASIC0.62□□□□□ -2.31
RAB40AQ8WXH6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.62□□□□□ -2.31
RAB40AQ8WXH6 RNU6-1211P-201ENST00000459179 105 ntBASIC0.62□□□□□ -2.31
RAB40AQ8WXH6 RNU7-2P-201ENST00000516096 62 ntBASIC0.62□□□□□ -2.31
RAB40AQ8WXH6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
RAB40AQ8WXH6 MIR101-2-201ENST00000362195 79 ntBASIC0.61□□□□□ -2.31
RAB40AQ8WXH6 RNU6-774P-201ENST00000363238 107 ntBASIC0.61□□□□□ -2.31
RAB40AQ8WXH6 Y_RNA.174-201ENST00000363781 105 ntBASIC0.61□□□□□ -2.31
RAB40AQ8WXH6 SNORD58C-201ENST00000365223 64 ntBASIC0.61□□□□□ -2.31
RAB40AQ8WXH6 RNU6-746P-201ENST00000384112 109 ntBASIC0.61□□□□□ -2.31
RAB40AQ8WXH6 RNU6-535P-201ENST00000384722 107 ntBASIC0.61□□□□□ -2.31
RAB40AQ8WXH6 MT-TI-201ENST00000387365 69 ntBASIC0.61□□□□□ -2.31
RAB40AQ8WXH6 RNU6-679P-201ENST00000391003 106 ntBASIC0.61□□□□□ -2.31
RAB40AQ8WXH6 Y_RNA.586-201ENST00000391146 98 ntBASIC0.61□□□□□ -2.31
RAB40AQ8WXH6 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.61□□□□□ -2.31
RAB40AQ8WXH6 RNU7-48P-201ENST00000458875 63 ntBASIC0.61□□□□□ -2.31
RAB40AQ8WXH6 AC138907.6-201ENST00000568401 126 ntBASIC0.61□□□□□ -2.31
RAB40AQ8WXH6 MIR3678-201ENST00000578455 94 ntBASIC0.61□□□□□ -2.31
RAB40AQ8WXH6 AC025166.1-201ENST00000612411 163 ntBASIC0.61□□□□□ -2.31
RAB40AQ8WXH6 Y_RNA.98-201ENST00000363109 102 ntBASIC0.6□□□□□ -2.31
RAB40AQ8WXH6 RNU6-865P-201ENST00000364772 107 ntBASIC0.6□□□□□ -2.31
RAB40AQ8WXH6 RNU6-945P-201ENST00000383947 107 ntBASIC0.6□□□□□ -2.31
RAB40AQ8WXH6 RNU6-291P-201ENST00000384720 107 ntBASIC0.6□□□□□ -2.31
RAB40AQ8WXH6 RNA5SP121-201ENST00000516537 101 ntBASIC0.6□□□□□ -2.31
RAB40AQ8WXH6 RNU6-971P-201ENST00000516920 106 ntBASIC0.6□□□□□ -2.31
RAB40AQ8WXH6 AC087741.2-201ENST00000619415 172 ntBASIC0.6□□□□□ -2.31
RAB40AQ8WXH6 uc_338.16-201ENST00000621804 95 ntBASIC0.6□□□□□ -2.31
RAB40AQ8WXH6 Y_RNA.32-201ENST00000362589 110 ntBASIC0.59□□□□□ -2.31
RAB40AQ8WXH6 SNORD115-19-201ENST00000363098 82 ntBASIC0.59□□□□□ -2.31
RAB40AQ8WXH6 SNORD115-18-201ENST00000363293 82 ntBASIC0.59□□□□□ -2.31
RAB40AQ8WXH6 SNORD115-17-201ENST00000364612 82 ntBASIC0.59□□□□□ -2.31
RAB40AQ8WXH6 SNORD115-35-201ENST00000365122 82 ntBASIC0.59□□□□□ -2.31
RAB40AQ8WXH6 MIR613-201ENST00000385248 95 ntBASIC0.59□□□□□ -2.31
RAB40AQ8WXH6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.59□□□□□ -2.31
RAB40AQ8WXH6 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
RAB40AQ8WXH6 SNORA31.14-201ENST00000516728 116 ntBASIC0.59□□□□□ -2.31
RAB40AQ8WXH6 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
RAB40AQ8WXH6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.59□□□□□ -2.31
RAB40AQ8WXH6 MIR6515-201ENST00000619843 57 ntBASIC0.59□□□□□ -2.31
RAB40AQ8WXH6 SNORD50.2-201ENST00000365465 70 ntBASIC0.58□□□□□ -2.32
RAB40AQ8WXH6 RNU6-429P-201ENST00000384582 108 ntBASIC0.58□□□□□ -2.32
RAB40AQ8WXH6 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
RAB40AQ8WXH6 MIR489-201ENST00000384923 84 ntBASIC0.58□□□□□ -2.32
RAB40AQ8WXH6 MIR644A-201ENST00000385262 94 ntBASIC0.58□□□□□ -2.32
RAB40AQ8WXH6 MIRLET7F2-201ENST00000385277 83 ntBASIC0.58□□□□□ -2.32
RAB40AQ8WXH6 RNU6-772P-201ENST00000516042 105 ntBASIC0.58□□□□□ -2.32
RAB40AQ8WXH6 RNU6-135P-201ENST00000516769 101 ntBASIC0.58□□□□□ -2.32
RAB40AQ8WXH6 MIR4714-201ENST00000580728 77 ntBASIC0.58□□□□□ -2.32
RAB40AQ8WXH6 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.58□□□□□ -2.32
RAB40AQ8WXH6 AC092634.7-201ENST00000621022 103 ntBASIC0.58□□□□□ -2.32
RAB40AQ8WXH6 AP001362.1-201ENST00000625165 124 ntBASIC0.58□□□□□ -2.32
RAB40AQ8WXH6 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
RAB40AQ8WXH6 RNA5SP94-201ENST00000516917 108 ntBASIC0.57□□□□□ -2.32
RAB40AQ8WXH6 Y_RNA.328-201ENST00000365208 113 ntBASIC0.56□□□□□ -2.32
RAB40AQ8WXH6 Y_RNA.346-201ENST00000365385 112 ntBASIC0.56□□□□□ -2.32
RAB40AQ8WXH6 MIR548D2-201ENST00000384955 97 ntBASIC0.56□□□□□ -2.32
RAB40AQ8WXH6 RNU6-1307P-201ENST00000391012 103 ntBASIC0.56□□□□□ -2.32
RAB40AQ8WXH6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.56□□□□□ -2.32
RAB40AQ8WXH6 RNU6-1234P-201ENST00000516877 103 ntBASIC0.56□□□□□ -2.32
RAB40AQ8WXH6 MIR4500-201ENST00000579472 76 ntBASIC0.56□□□□□ -2.32
RAB40AQ8WXH6 Y_RNA.773-201ENST00000607168 90 ntBASIC0.56□□□□□ -2.32
RAB40AQ8WXH6 MIR7111-201ENST00000619751 72 ntBASIC0.56□□□□□ -2.32
RAB40AQ8WXH6 MTND5P18-201ENST00000445624 1801 ntBASIC0.56□□□□□ -2.32
RAB40AQ8WXH6 Y_RNA.56-201ENST00000362798 112 ntBASIC0.55□□□□□ -2.32
RAB40AQ8WXH6 RNU6-704P-201ENST00000364162 103 ntBASIC0.55□□□□□ -2.32
RAB40AQ8WXH6 Y_RNA.567-201ENST00000384736 106 ntBASIC0.55□□□□□ -2.32
RAB40AQ8WXH6 RNU6-735P-201ENST00000410612 107 ntBASIC0.55□□□□□ -2.32
RAB40AQ8WXH6 RN7SKP12-201ENST00000516275 143 ntBASIC0.55□□□□□ -2.32
RAB40AQ8WXH6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
RAB40AQ8WXH6 AL157777.2-201ENST00000258070 137 ntBASIC0.54□□□□□ -2.32
RAB40AQ8WXH6 Y_RNA.127-201ENST00000363386 109 ntBASIC0.54□□□□□ -2.32
RAB40AQ8WXH6 RNY4P6-201ENST00000363667 96 ntBASIC0.54□□□□□ -2.32
RAB40AQ8WXH6 RNU6-1229P-201ENST00000364295 107 ntBASIC0.54□□□□□ -2.32
RAB40AQ8WXH6 RNU6-187P-201ENST00000384139 106 ntBASIC0.54□□□□□ -2.32
RAB40AQ8WXH6 RNU6-80P-201ENST00000384195 107 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 252.1 ms