Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 MIR605-201ENST00000385078 83 ntBASIC1.21□□□□□ -2.22
CCHCR1Q8TD31 MIR125B2-201ENST00000385128 89 ntBASIC1.21□□□□□ -2.22
CCHCR1Q8TD31 MIR1257-201ENST00000408490 117 ntBASIC1.21□□□□□ -2.22
CCHCR1Q8TD31 SNORD93-201ENST00000408813 74 ntBASIC1.21□□□□□ -2.22
CCHCR1Q8TD31 OR2A41P-201ENST00000473586 105 ntBASIC1.21□□□□□ -2.22
CCHCR1Q8TD31 AC138749.4-201ENST00000563970 127 ntBASIC1.21□□□□□ -2.22
CCHCR1Q8TD31 MIR4491-201ENST00000581087 68 ntBASIC1.21□□□□□ -2.22
CCHCR1Q8TD31 AL359821.1-201ENST00000605519 182 ntBASIC1.21□□□□□ -2.22
CCHCR1Q8TD31 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
CCHCR1Q8TD31 Y_RNA.360-201ENST00000365512 102 ntBASIC1.2□□□□□ -2.22
CCHCR1Q8TD31 MIR1827-201ENST00000408549 66 ntBASIC1.2□□□□□ -2.22
CCHCR1Q8TD31 MIR4694-201ENST00000578534 80 ntBASIC1.2□□□□□ -2.22
CCHCR1Q8TD31 MIR4676-201ENST00000583078 72 ntBASIC1.2□□□□□ -2.22
CCHCR1Q8TD31 MIR376B-201ENST00000614515 100 ntBASIC1.2□□□□□ -2.22
CCHCR1Q8TD31 Y_RNA.81-201ENST00000362997 102 ntBASIC1.19□□□□□ -2.22
CCHCR1Q8TD31 Y_RNA.116-201ENST00000363292 103 ntBASIC1.19□□□□□ -2.22
CCHCR1Q8TD31 Y_RNA.163-201ENST00000363702 113 ntBASIC1.19□□□□□ -2.22
CCHCR1Q8TD31 RNU6-865P-201ENST00000364772 107 ntBASIC1.19□□□□□ -2.22
CCHCR1Q8TD31 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.19□□□□□ -2.22
CCHCR1Q8TD31 AC015818.7-201ENST00000428754 109 ntBASIC1.19□□□□□ -2.22
CCHCR1Q8TD31 FABP5P4-201ENST00000437203 171 ntBASIC1.19□□□□□ -2.22
CCHCR1Q8TD31 AC087499.7-201ENST00000441958 109 ntBASIC1.19□□□□□ -2.22
CCHCR1Q8TD31 UBL5P1-201ENST00000507979 193 ntBASIC1.19□□□□□ -2.22
CCHCR1Q8TD31 MIR1-1-201ENST00000362147 71 ntBASIC1.18□□□□□ -2.22
CCHCR1Q8TD31 Y_RNA.377-201ENST00000365644 108 ntBASIC1.18□□□□□ -2.22
CCHCR1Q8TD31 MIR34C-201ENST00000384831 77 ntBASIC1.18□□□□□ -2.22
CCHCR1Q8TD31 MIR577-201ENST00000385196 96 ntBASIC1.18□□□□□ -2.22
CCHCR1Q8TD31 RNU6-554P-201ENST00000410466 106 ntBASIC1.18□□□□□ -2.22
CCHCR1Q8TD31 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.18□□□□□ -2.22
CCHCR1Q8TD31 AC067940.1-201ENST00000458411 300 ntBASIC1.18□□□□□ -2.22
CCHCR1Q8TD31 SNORD124-201ENST00000459577 104 ntBASIC1.18□□□□□ -2.22
CCHCR1Q8TD31 PDCD5P2-201ENST00000507570 312 ntBASIC1.18□□□□□ -2.22
CCHCR1Q8TD31 RNU6-1053P-201ENST00000515930 101 ntBASIC1.18□□□□□ -2.22
CCHCR1Q8TD31 AP001362.1-201ENST00000625165 124 ntBASIC1.18□□□□□ -2.22
CCHCR1Q8TD31 RNY3P2-201ENST00000362918 102 ntBASIC1.17□□□□□ -2.22
CCHCR1Q8TD31 RNA5SP133-201ENST00000363368 119 ntBASIC1.17□□□□□ -2.22
CCHCR1Q8TD31 RNU6-1099P-201ENST00000363533 107 ntBASIC1.17□□□□□ -2.22
CCHCR1Q8TD31 RNU6-1201P-201ENST00000384227 107 ntBASIC1.17□□□□□ -2.22
CCHCR1Q8TD31 MIR1302-5-201ENST00000408164 150 ntBASIC1.17□□□□□ -2.22
CCHCR1Q8TD31 RNU4-83P-201ENST00000410863 133 ntBASIC1.17□□□□□ -2.22
CCHCR1Q8TD31 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.17□□□□□ -2.22
CCHCR1Q8TD31 TRMT112P2-201ENST00000512910 132 ntBASIC1.17□□□□□ -2.22
CCHCR1Q8TD31 RNU6-1110P-201ENST00000516462 101 ntBASIC1.17□□□□□ -2.22
CCHCR1Q8TD31 RNU6-1006P-201ENST00000516998 103 ntBASIC1.17□□□□□ -2.22
CCHCR1Q8TD31 MIR4804-201ENST00000581683 73 ntBASIC1.17□□□□□ -2.22
CCHCR1Q8TD31 SNORD92-201ENST00000585078 85 ntBASIC1.17□□□□□ -2.22
CCHCR1Q8TD31 AC103810.9-201ENST00000606688 112 ntBASIC1.17□□□□□ -2.22
CCHCR1Q8TD31 uc_338.28-201ENST00000612082 187 ntBASIC1.17□□□□□ -2.22
CCHCR1Q8TD31 MIR8066-201ENST00000617280 78 ntBASIC1.17□□□□□ -2.22
CCHCR1Q8TD31 U6.109-201ENST00000636749 87 ntBASIC1.17□□□□□ -2.22
CCHCR1Q8TD31 AL512310.12-203ENST00000640543 90 ntBASIC1.17□□□□□ -2.22
CCHCR1Q8TD31 SNORA63.4-201ENST00000362763 126 ntBASIC1.16□□□□□ -2.22
CCHCR1Q8TD31 Y_RNA.78-201ENST00000362970 110 ntBASIC1.16□□□□□ -2.22
CCHCR1Q8TD31 MIR100-201ENST00000385259 80 ntBASIC1.16□□□□□ -2.22
CCHCR1Q8TD31 U7.7-201ENST00000459276 60 ntBASIC1.16□□□□□ -2.22
CCHCR1Q8TD31 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CCHCR1Q8TD31 RNY1P10-201ENST00000363268 113 ntBASIC1.15□□□□□ -2.23
CCHCR1Q8TD31 Y_RNA.119-201ENST00000363301 96 ntBASIC1.15□□□□□ -2.23
CCHCR1Q8TD31 SNORD114-24-201ENST00000365029 72 ntBASIC1.15□□□□□ -2.23
CCHCR1Q8TD31 MIR938-201ENST00000401216 83 ntBASIC1.15□□□□□ -2.23
CCHCR1Q8TD31 RNU7-56P-201ENST00000458744 62 ntBASIC1.15□□□□□ -2.23
CCHCR1Q8TD31 RNU6-977P-201ENST00000516411 103 ntBASIC1.15□□□□□ -2.23
CCHCR1Q8TD31 RNU6-765P-201ENST00000516916 99 ntBASIC1.15□□□□□ -2.23
CCHCR1Q8TD31 RNU7-156P-201ENST00000517214 74 ntBASIC1.15□□□□□ -2.23
CCHCR1Q8TD31 MIR6082-201ENST00000613604 109 ntBASIC1.15□□□□□ -2.23
CCHCR1Q8TD31 AL442128.1-201ENST00000615151 90 ntBASIC1.15□□□□□ -2.23
CCHCR1Q8TD31 Y_RNA.42-201ENST00000362660 108 ntBASIC1.14□□□□□ -2.23
CCHCR1Q8TD31 RNU6-832P-201ENST00000363319 107 ntBASIC1.14□□□□□ -2.23
CCHCR1Q8TD31 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CCHCR1Q8TD31 RNU6-321P-201ENST00000410912 106 ntBASIC1.14□□□□□ -2.23
CCHCR1Q8TD31 RNU6-1194P-201ENST00000516208 104 ntBASIC1.14□□□□□ -2.23
CCHCR1Q8TD31 SNORA25.16-201ENST00000516741 121 ntBASIC1.14□□□□□ -2.23
CCHCR1Q8TD31 AL136317.1-201ENST00000612653 226 ntBASIC1.14□□□□□ -2.23
CCHCR1Q8TD31 HSBP1P2-201ENST00000299671 229 ntBASIC1.13□□□□□ -2.23
CCHCR1Q8TD31 MIR337-201ENST00000362281 93 ntBASIC1.13□□□□□ -2.23
CCHCR1Q8TD31 RNU6-403P-201ENST00000363163 104 ntBASIC1.13□□□□□ -2.23
CCHCR1Q8TD31 SNORD38.1-201ENST00000363863 68 ntBASIC1.13□□□□□ -2.23
CCHCR1Q8TD31 RNU6-392P-201ENST00000364926 101 ntBASIC1.13□□□□□ -2.23
CCHCR1Q8TD31 MIR942-201ENST00000401111 86 ntBASIC1.13□□□□□ -2.23
CCHCR1Q8TD31 MIR3613-201ENST00000579844 87 ntBASIC1.13□□□□□ -2.23
CCHCR1Q8TD31 MIR4295-201ENST00000585286 85 ntBASIC1.13□□□□□ -2.23
CCHCR1Q8TD31 RMST_2.1-201ENST00000617263 136 ntBASIC1.13□□□□□ -2.23
CCHCR1Q8TD31 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CCHCR1Q8TD31 Y_RNA.13-201ENST00000362403 112 ntBASIC1.12□□□□□ -2.23
CCHCR1Q8TD31 RNU4-58P-201ENST00000363192 141 ntBASIC1.12□□□□□ -2.23
CCHCR1Q8TD31 Y_RNA.247-201ENST00000364500 92 ntBASIC1.12□□□□□ -2.23
CCHCR1Q8TD31 AL031737.1-201ENST00000450125 223 ntBASIC1.12□□□□□ -2.23
CCHCR1Q8TD31 AC087343.1-201ENST00000477341 475 ntBASIC1.12□□□□□ -2.23
CCHCR1Q8TD31 RNU6-904P-201ENST00000516206 101 ntBASIC1.12□□□□□ -2.23
CCHCR1Q8TD31 RNU6-531P-201ENST00000516694 104 ntBASIC1.12□□□□□ -2.23
CCHCR1Q8TD31 RNU6-537P-201ENST00000517277 103 ntBASIC1.12□□□□□ -2.23
CCHCR1Q8TD31 AC141557.1-201ENST00000540982 400 ntBASIC1.12□□□□□ -2.23
CCHCR1Q8TD31 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CCHCR1Q8TD31 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CCHCR1Q8TD31 RNU6-766P-201ENST00000362478 107 ntBASIC1.11□□□□□ -2.23
CCHCR1Q8TD31 RNU6-53P-201ENST00000365367 106 ntBASIC1.11□□□□□ -2.23
CCHCR1Q8TD31 SNORA51.5-201ENST00000384126 131 ntBASIC1.11□□□□□ -2.23
CCHCR1Q8TD31 RNU6-1113P-201ENST00000384348 107 ntBASIC1.11□□□□□ -2.23
CCHCR1Q8TD31 RNU6-364P-201ENST00000384387 107 ntBASIC1.11□□□□□ -2.23
CCHCR1Q8TD31 MIR520F-201ENST00000384824 87 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 224.8 ms