Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SNORD41-201ENST00000386967 70 ntBASIC2.11□□□□□ -2.07
SHKBP1Q8TBC3 SNORA26.9-201ENST00000391322 122 ntBASIC2.11□□□□□ -2.07
SHKBP1Q8TBC3 MIR1265-201ENST00000408444 86 ntBASIC2.11□□□□□ -2.07
SHKBP1Q8TBC3 RNA5SP450-201ENST00000411206 102 ntBASIC2.11□□□□□ -2.07
SHKBP1Q8TBC3 HMGN2P38-201ENST00000423806 265 ntBASIC2.11□□□□□ -2.07
SHKBP1Q8TBC3 RNU6-634P-201ENST00000459134 106 ntBASIC2.11□□□□□ -2.07
SHKBP1Q8TBC3 AC125388.1-201ENST00000459631 156 ntBASIC2.11□□□□□ -2.07
SHKBP1Q8TBC3 RNU6-70P-201ENST00000516438 60 ntBASIC2.11□□□□□ -2.07
SHKBP1Q8TBC3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SHKBP1Q8TBC3 MIR1297-201ENST00000637311 77 ntBASIC2.11□□□□□ -2.07
SHKBP1Q8TBC3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SHKBP1Q8TBC3 Y_RNA.340-201ENST00000365330 92 ntBASIC2.1□□□□□ -2.07
SHKBP1Q8TBC3 Y_RNA.491-201ENST00000384417 107 ntBASIC2.1□□□□□ -2.07
SHKBP1Q8TBC3 RNU6-243P-201ENST00000391140 107 ntBASIC2.1□□□□□ -2.07
SHKBP1Q8TBC3 Y_RNA.681-201ENST00000516445 113 ntBASIC2.1□□□□□ -2.07
SHKBP1Q8TBC3 AL096861.1-201ENST00000610899 123 ntBASIC2.1□□□□□ -2.07
SHKBP1Q8TBC3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.1□□□□□ -2.07
SHKBP1Q8TBC3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SHKBP1Q8TBC3 AL161722.3-201ENST00000605789 2983 ntBASIC2.1□□□□□ -2.07
SHKBP1Q8TBC3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
SHKBP1Q8TBC3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SHKBP1Q8TBC3 Y_RNA.264-201ENST00000364665 102 ntBASIC2.09□□□□□ -2.07
SHKBP1Q8TBC3 Y_RNA.386-201ENST00000383913 105 ntBASIC2.09□□□□□ -2.07
SHKBP1Q8TBC3 AC074348.1-201ENST00000426503 132 ntBASIC2.09□□□□□ -2.07
SHKBP1Q8TBC3 SNORD92-201ENST00000585078 85 ntBASIC2.09□□□□□ -2.07
SHKBP1Q8TBC3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SHKBP1Q8TBC3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.09□□□□□ -2.08
SHKBP1Q8TBC3 RNU6-208P-201ENST00000362431 107 ntBASIC2.08□□□□□ -2.08
SHKBP1Q8TBC3 RNU6-396P-201ENST00000365369 105 ntBASIC2.08□□□□□ -2.08
SHKBP1Q8TBC3 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
SHKBP1Q8TBC3 MIR583-201ENST00000384846 75 ntBASIC2.08□□□□□ -2.08
SHKBP1Q8TBC3 MIR548U-201ENST00000390728 81 ntBASIC2.08□□□□□ -2.08
SHKBP1Q8TBC3 SNORD90-201ENST00000391145 111 ntBASIC2.08□□□□□ -2.08
SHKBP1Q8TBC3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.08□□□□□ -2.08
SHKBP1Q8TBC3 RNU6-1165P-201ENST00000410119 107 ntBASIC2.08□□□□□ -2.08
SHKBP1Q8TBC3 RNA5SP270-201ENST00000411361 118 ntBASIC2.08□□□□□ -2.08
SHKBP1Q8TBC3 AL161935.2-201ENST00000414627 60 ntBASIC2.08□□□□□ -2.08
SHKBP1Q8TBC3 AC245517.4-201ENST00000448601 281 ntBASIC2.08□□□□□ -2.08
SHKBP1Q8TBC3 RNU7-106P-201ENST00000459514 67 ntBASIC2.08□□□□□ -2.08
SHKBP1Q8TBC3 MIR4264-201ENST00000583520 66 ntBASIC2.08□□□□□ -2.08
SHKBP1Q8TBC3 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.08□□□□□ -2.08
SHKBP1Q8TBC3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SHKBP1Q8TBC3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SHKBP1Q8TBC3 MIRLET7F1-201ENST00000362202 87 ntBASIC2.07□□□□□ -2.08
SHKBP1Q8TBC3 RNU5F-1-201ENST00000362507 117 ntBASIC2.07□□□□□ -2.08
SHKBP1Q8TBC3 RNU6-466P-201ENST00000391224 103 ntBASIC2.07□□□□□ -2.08
SHKBP1Q8TBC3 AC015818.7-201ENST00000428754 109 ntBASIC2.07□□□□□ -2.08
SHKBP1Q8TBC3 RNU6-303P-201ENST00000517091 106 ntBASIC2.07□□□□□ -2.08
SHKBP1Q8TBC3 MIR5089-201ENST00000580047 84 ntBASIC2.07□□□□□ -2.08
SHKBP1Q8TBC3 SNRPGP19-201ENST00000603826 189 ntBASIC2.07□□□□□ -2.08
SHKBP1Q8TBC3 uc_338.6-201ENST00000613544 171 ntBASIC2.07□□□□□ -2.08
SHKBP1Q8TBC3 MIR664A-201ENST00000626086 82 ntBASIC2.07□□□□□ -2.08
SHKBP1Q8TBC3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SHKBP1Q8TBC3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SHKBP1Q8TBC3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 SNORA25.3-201ENST00000363205 127 ntBASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 RNU6-957P-201ENST00000363652 99 ntBASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 RNA5SP259-201ENST00000365541 109 ntBASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 MIR513A1-201ENST00000385138 129 ntBASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 MIR518E-201ENST00000385252 88 ntBASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 MT-TF-201ENST00000387314 71 ntBASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 MT-TN-201ENST00000387400 73 ntBASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 RNU6-205P-201ENST00000390858 107 ntBASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 RNU6-587P-201ENST00000391282 106 ntBASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 RNU7-62P-201ENST00000458856 62 ntBASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 RNA5SP182-201ENST00000516064 82 ntBASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 RNU6-922P-201ENST00000516753 99 ntBASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 SNORA31.25-201ENST00000517242 134 ntBASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 AC131280.1-202ENST00000624067 4211 ntBASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SHKBP1Q8TBC3 RNU6-649P-201ENST00000384463 107 ntBASIC2.04□□□□□ -2.08
SHKBP1Q8TBC3 SNORD63B-201ENST00000411005 70 ntBASIC2.04□□□□□ -2.08
SHKBP1Q8TBC3 snoU13.25-201ENST00000458945 104 ntBASIC2.04□□□□□ -2.08
SHKBP1Q8TBC3 RNU6-531P-201ENST00000516694 104 ntBASIC2.04□□□□□ -2.08
SHKBP1Q8TBC3 RNU1-17P-201ENST00000363022 152 ntBASIC2.03□□□□□ -2.08
SHKBP1Q8TBC3 RNU6-540P-201ENST00000384622 101 ntBASIC2.03□□□□□ -2.08
SHKBP1Q8TBC3 AC003989.2-201ENST00000440224 169 ntBASIC2.03□□□□□ -2.08
SHKBP1Q8TBC3 RNA5SP458-201ENST00000516188 119 ntBASIC2.03□□□□□ -2.08
SHKBP1Q8TBC3 RNU6-1194P-201ENST00000516208 104 ntBASIC2.03□□□□□ -2.08
SHKBP1Q8TBC3 SNORA25.16-201ENST00000516741 121 ntBASIC2.03□□□□□ -2.08
SHKBP1Q8TBC3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.03□□□□□ -2.08
SHKBP1Q8TBC3 MIR4491-201ENST00000581087 68 ntBASIC2.03□□□□□ -2.08
SHKBP1Q8TBC3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
SHKBP1Q8TBC3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SHKBP1Q8TBC3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SHKBP1Q8TBC3 AL596028.1-201ENST00000326971 197 ntBASIC2.02□□□□□ -2.09
SHKBP1Q8TBC3 Y_RNA.12-201ENST00000362393 112 ntBASIC2.02□□□□□ -2.09
SHKBP1Q8TBC3 RNU4-52P-201ENST00000384209 138 ntBASIC2.02□□□□□ -2.09
SHKBP1Q8TBC3 Y_RNA.588-201ENST00000391254 102 ntBASIC2.02□□□□□ -2.09
SHKBP1Q8TBC3 Y_RNA.596-201ENST00000410462 109 ntBASIC2.02□□□□□ -2.09
SHKBP1Q8TBC3 AC025033.1-201ENST00000463883 194 ntBASIC2.02□□□□□ -2.09
SHKBP1Q8TBC3 RPL30P7-201ENST00000479312 323 ntBASIC2.02□□□□□ -2.09
SHKBP1Q8TBC3 MIR2115-201ENST00000516657 100 ntBASIC2.02□□□□□ -2.09
SHKBP1Q8TBC3 MIR6840-201ENST00000611937 71 ntBASIC2.02□□□□□ -2.09
SHKBP1Q8TBC3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SHKBP1Q8TBC3 RNU4-58P-201ENST00000363192 141 ntBASIC2.01□□□□□ -2.09
SHKBP1Q8TBC3 SNORA3A-201ENST00000364113 130 ntBASIC2.01□□□□□ -2.09
SHKBP1Q8TBC3 RNU1-52P-201ENST00000384190 164 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms