Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC069439.1-201ENST00000494739 167 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 MIR4520-1-201ENST00000582609 70 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 MIR4499-201ENST00000584834 69 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 VN1R91P-201ENST00000594377 169 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 snoU83B.1-201ENST00000517136 88 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 AC060788.1-201ENST00000521318 469 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 C8orf59P2-201ENST00000603441 271 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 SNORD75.2-201ENST00000408784 58 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 RNU6-120P-201ENST00000516077 103 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 SNORA25.13-201ENST00000516395 103 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 SNORA63.7-201ENST00000365579 123 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 RNU7-24P-201ENST00000458867 62 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 MIR4752-201ENST00000579672 72 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 AC090574.1-201ENST00000623186 233 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 RNU6-880P-201ENST00000384526 107 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 MT-TM-201ENST00000387377 68 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 RNU6-588P-201ENST00000410281 105 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 MTND4P17-201ENST00000470444 350 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 RNA5SP272-201ENST00000516095 111 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 AC132825.6-201ENST00000638861 357 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 SNORA49-201ENST00000386157 136 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 MIR548AG2-201ENST00000581228 64 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 MIR6502-201ENST00000617296 76 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 MIR3688-2-201ENST00000636963 87 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 RNU4-90P-201ENST00000362773 141 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 SNORD74.6-201ENST00000364796 70 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 SNORD114-29-201ENST00000364819 70 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.688-201ENST00000516565 95 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.717-201ENST00000517106 92 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 RNU4-24P-201ENST00000364565 139 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 RNU6-483P-201ENST00000384088 108 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 RNU6-780P-201ENST00000391030 104 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 MTND3P3-201ENST00000505004 126 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 RNU6-397P-201ENST00000516226 104 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 RNU2-35P-201ENST00000516446 142 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 AC002553.4-201ENST00000616896 331 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 RNU4-50P-201ENST00000364361 141 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 RNU6-818P-201ENST00000364837 108 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 AC097510.1-201ENST00000510945 133 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 AL513043.2-201ENST00000573941 143 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 AC011603.4-201ENST00000611325 277 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 RNU6-623P-201ENST00000363143 105 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 RNU6-21P-201ENST00000384710 107 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 MIR548I1-201ENST00000408810 149 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 RNU6-383P-201ENST00000410864 94 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 MIR517B-201ENST00000385102 67 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 AC108019.1-201ENST00000512540 175 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 MIR548AE1-201ENST00000583292 70 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 MIR548AE2-201ENST00000583456 67 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 RNU6-845P-201ENST00000362578 103 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 RNA5SP484-201ENST00000458857 111 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 AC107027.2-201ENST00000512197 115 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 SERF1AP1-201ENST00000514575 187 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 AL359881.1-201ENST00000602916 267 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 SNORA75-201ENST00000384158 137 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 MRPS35P2-201ENST00000508242 191 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 MIR4460-201ENST00000577862 86 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 AC104985.2-201ENST00000620598 500 ntBASIC-0.24□□□□□ -2.45
SYNE1Q8NF91 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 RNU6-429P-201ENST00000384582 108 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 AC024909.2-201ENST00000553035 286 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 MIR4500-201ENST00000579472 76 ntBASIC-0.25□□□□□ -2.45
SYNE1Q8NF91 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 247.4 ms