Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RNU6-369P-201ENST00000362515 102 ntBASIC1.39□□□□□ -2.19
HIPK4Q8NE63 RNU6-1163P-201ENST00000364516 107 ntBASIC1.39□□□□□ -2.19
HIPK4Q8NE63 RNU6-60P-201ENST00000364792 103 ntBASIC1.39□□□□□ -2.19
HIPK4Q8NE63 SNORA25-201ENST00000384384 134 ntBASIC1.39□□□□□ -2.19
HIPK4Q8NE63 MIR548G-201ENST00000408442 89 ntBASIC1.39□□□□□ -2.19
HIPK4Q8NE63 AC002429.1-201ENST00000437672 148 ntBASIC1.39□□□□□ -2.19
HIPK4Q8NE63 AC109327.2-201ENST00000448339 378 ntBASIC1.39□□□□□ -2.19
HIPK4Q8NE63 MIR4771-2-201ENST00000577758 74 ntBASIC1.39□□□□□ -2.19
HIPK4Q8NE63 AC090897.1-201ENST00000580909 226 ntBASIC1.39□□□□□ -2.19
HIPK4Q8NE63 MIR4771-1-201ENST00000582617 74 ntBASIC1.39□□□□□ -2.19
HIPK4Q8NE63 AC104984.5-201ENST00000586878 94 ntBASIC1.39□□□□□ -2.19
HIPK4Q8NE63 AC020891.4-201ENST00000605745 93 ntBASIC1.39□□□□□ -2.19
HIPK4Q8NE63 MIR6715A-201ENST00000615929 79 ntBASIC1.39□□□□□ -2.19
HIPK4Q8NE63 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
HIPK4Q8NE63 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
HIPK4Q8NE63 Y_RNA.119-201ENST00000363301 96 ntBASIC1.38□□□□□ -2.19
HIPK4Q8NE63 MIR488-201ENST00000365739 83 ntBASIC1.38□□□□□ -2.19
HIPK4Q8NE63 Y_RNA.467-201ENST00000384297 102 ntBASIC1.38□□□□□ -2.19
HIPK4Q8NE63 MIR1257-201ENST00000408490 117 ntBASIC1.38□□□□□ -2.19
HIPK4Q8NE63 AC108210.2-201ENST00000503681 201 ntBASIC1.38□□□□□ -2.19
HIPK4Q8NE63 SNORA25.16-201ENST00000516741 121 ntBASIC1.38□□□□□ -2.19
HIPK4Q8NE63 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.38□□□□□ -2.19
HIPK4Q8NE63 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.38□□□□□ -2.19
HIPK4Q8NE63 SNORD38.2-201ENST00000384470 69 ntBASIC1.37□□□□□ -2.19
HIPK4Q8NE63 MIR222-201ENST00000384992 110 ntBASIC1.37□□□□□ -2.19
HIPK4Q8NE63 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
HIPK4Q8NE63 RNU6-644P-201ENST00000391155 98 ntBASIC1.37□□□□□ -2.19
HIPK4Q8NE63 RPS26P5-201ENST00000418544 335 ntBASIC1.37□□□□□ -2.19
HIPK4Q8NE63 SNORD13-201ENST00000459299 104 ntBASIC1.37□□□□□ -2.19
HIPK4Q8NE63 MIR4439-201ENST00000583746 80 ntBASIC1.37□□□□□ -2.19
HIPK4Q8NE63 MIR4781-201ENST00000585250 76 ntBASIC1.37□□□□□ -2.19
HIPK4Q8NE63 AC027335.2-201ENST00000624030 375 ntBASIC1.37□□□□□ -2.19
HIPK4Q8NE63 MIR2052-201ENST00000636055 55 ntBASIC1.37□□□□□ -2.19
HIPK4Q8NE63 Y_RNA.173-201ENST00000363776 113 ntBASIC1.36□□□□□ -2.19
HIPK4Q8NE63 Y_RNA.342-201ENST00000365352 113 ntBASIC1.36□□□□□ -2.19
HIPK4Q8NE63 MIR150-201ENST00000385048 84 ntBASIC1.36□□□□□ -2.19
HIPK4Q8NE63 RNU4-83P-201ENST00000410863 133 ntBASIC1.36□□□□□ -2.19
HIPK4Q8NE63 AL354695.1-201ENST00000427935 228 ntBASIC1.36□□□□□ -2.19
HIPK4Q8NE63 snoU13.23-201ENST00000458863 104 ntBASIC1.36□□□□□ -2.19
HIPK4Q8NE63 RNU7-61P-201ENST00000515897 61 ntBASIC1.36□□□□□ -2.19
HIPK4Q8NE63 MIR4500-201ENST00000579472 76 ntBASIC1.36□□□□□ -2.19
HIPK4Q8NE63 RNU6-90P-201ENST00000606352 106 ntBASIC1.36□□□□□ -2.19
HIPK4Q8NE63 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HIPK4Q8NE63 Y_RNA.43-201ENST00000362670 111 ntBASIC1.35□□□□□ -2.19
HIPK4Q8NE63 RNU6-403P-201ENST00000363163 104 ntBASIC1.35□□□□□ -2.19
HIPK4Q8NE63 MIR125B2-201ENST00000385128 89 ntBASIC1.35□□□□□ -2.19
HIPK4Q8NE63 SNORA67.6-201ENST00000391093 99 ntBASIC1.35□□□□□ -2.19
HIPK4Q8NE63 RNY4P30-201ENST00000410216 95 ntBASIC1.35□□□□□ -2.19
HIPK4Q8NE63 SPINT5P-201ENST00000448174 155 ntBASIC1.35□□□□□ -2.19
HIPK4Q8NE63 SNRPGP12-201ENST00000449481 213 ntBASIC1.35□□□□□ -2.19
HIPK4Q8NE63 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.35□□□□□ -2.19
HIPK4Q8NE63 RNU6-531P-201ENST00000516694 104 ntBASIC1.35□□□□□ -2.19
HIPK4Q8NE63 SNORA31.24-201ENST00000517232 57 ntBASIC1.35□□□□□ -2.19
HIPK4Q8NE63 MIR5582-201ENST00000579697 68 ntBASIC1.35□□□□□ -2.19
HIPK4Q8NE63 MIR8066-201ENST00000617280 78 ntBASIC1.35□□□□□ -2.19
HIPK4Q8NE63 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
HIPK4Q8NE63 RNU6-1244P-201ENST00000363614 108 ntBASIC1.34□□□□□ -2.19
HIPK4Q8NE63 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.34□□□□□ -2.19
HIPK4Q8NE63 RNU6-994P-201ENST00000410507 111 ntBASIC1.34□□□□□ -2.19
HIPK4Q8NE63 AC015712.3-201ENST00000559380 164 ntBASIC1.34□□□□□ -2.19
HIPK4Q8NE63 MTND5P40-201ENST00000559945 246 ntBASIC1.34□□□□□ -2.19
HIPK4Q8NE63 MIR4676-201ENST00000583078 72 ntBASIC1.34□□□□□ -2.19
HIPK4Q8NE63 RNU6-86P-201ENST00000606534 107 ntBASIC1.34□□□□□ -2.19
HIPK4Q8NE63 MALAT1.1-201ENST00000618249 95 ntBASIC1.34□□□□□ -2.19
HIPK4Q8NE63 RNU1-17P-201ENST00000363022 152 ntBASIC1.33□□□□□ -2.2
HIPK4Q8NE63 SNORA72.6-201ENST00000384520 129 ntBASIC1.33□□□□□ -2.2
HIPK4Q8NE63 Y_RNA.567-201ENST00000384736 106 ntBASIC1.33□□□□□ -2.2
HIPK4Q8NE63 SNORA67.5-201ENST00000391036 107 ntBASIC1.33□□□□□ -2.2
HIPK4Q8NE63 MIR6082-201ENST00000613604 109 ntBASIC1.33□□□□□ -2.2
HIPK4Q8NE63 AL353997.5-201ENST00000618886 171 ntBASIC1.33□□□□□ -2.2
HIPK4Q8NE63 Y_RNA.13-201ENST00000362403 112 ntBASIC1.32□□□□□ -2.2
HIPK4Q8NE63 Y_RNA.42-201ENST00000362660 108 ntBASIC1.32□□□□□ -2.2
HIPK4Q8NE63 RNU4-58P-201ENST00000363192 141 ntBASIC1.32□□□□□ -2.2
HIPK4Q8NE63 RNU6-1255P-201ENST00000363434 112 ntBASIC1.32□□□□□ -2.2
HIPK4Q8NE63 Y_RNA.290-201ENST00000364879 114 ntBASIC1.32□□□□□ -2.2
HIPK4Q8NE63 RNU6-1131P-201ENST00000364955 107 ntBASIC1.32□□□□□ -2.2
HIPK4Q8NE63 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HIPK4Q8NE63 RNU6-49P-201ENST00000384256 107 ntBASIC1.32□□□□□ -2.2
HIPK4Q8NE63 RNU6-813P-201ENST00000384691 107 ntBASIC1.32□□□□□ -2.2
HIPK4Q8NE63 MIR19B1-201ENST00000384829 87 ntBASIC1.32□□□□□ -2.2
HIPK4Q8NE63 MIR764-201ENST00000390811 85 ntBASIC1.32□□□□□ -2.2
HIPK4Q8NE63 BX276092.1-201ENST00000427368 251 ntBASIC1.32□□□□□ -2.2
HIPK4Q8NE63 Y_RNA.705-201ENST00000516862 110 ntBASIC1.32□□□□□ -2.2
HIPK4Q8NE63 AC019288.1-201ENST00000557918 224 ntBASIC1.32□□□□□ -2.2
HIPK4Q8NE63 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.32□□□□□ -2.2
HIPK4Q8NE63 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HIPK4Q8NE63 RNU6-53P-201ENST00000365367 106 ntBASIC1.31□□□□□ -2.2
HIPK4Q8NE63 MIR4524B-201ENST00000581569 115 ntBASIC1.31□□□□□ -2.2
HIPK4Q8NE63 MIR4804-201ENST00000581683 73 ntBASIC1.31□□□□□ -2.2
HIPK4Q8NE63 U7.3-201ENST00000616123 62 ntBASIC1.31□□□□□ -2.2
HIPK4Q8NE63 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HIPK4Q8NE63 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HIPK4Q8NE63 Y_RNA.369-201ENST00000365568 117 ntBASIC1.3□□□□□ -2.2
HIPK4Q8NE63 RNU6-571P-201ENST00000384128 107 ntBASIC1.3□□□□□ -2.2
HIPK4Q8NE63 RNU6-939P-201ENST00000384634 107 ntBASIC1.3□□□□□ -2.2
HIPK4Q8NE63 MIR1827-201ENST00000408549 66 ntBASIC1.3□□□□□ -2.2
HIPK4Q8NE63 RNU6-887P-201ENST00000410660 100 ntBASIC1.3□□□□□ -2.2
HIPK4Q8NE63 BTF3P4-201ENST00000418852 495 ntBASIC1.3□□□□□ -2.2
HIPK4Q8NE63 RNU6-1194P-201ENST00000516208 104 ntBASIC1.3□□□□□ -2.2
HIPK4Q8NE63 RNU6-162P-201ENST00000516228 103 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms