Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RNU6-531P-201ENST00000516694 104 ntBASIC1.08□□□□□ -2.24
CLRN3Q8NCR9 RNU6-448P-201ENST00000517052 107 ntBASIC1.08□□□□□ -2.24
CLRN3Q8NCR9 SNORD53B-201ENST00000577887 78 ntBASIC1.08□□□□□ -2.24
CLRN3Q8NCR9 MIR4694-201ENST00000578534 80 ntBASIC1.08□□□□□ -2.24
CLRN3Q8NCR9 AL645939.4-201ENST00000604495 135 ntBASIC1.08□□□□□ -2.24
CLRN3Q8NCR9 MIR101-2-201ENST00000362195 79 ntBASIC1.07□□□□□ -2.24
CLRN3Q8NCR9 Y_RNA.116-201ENST00000363292 103 ntBASIC1.07□□□□□ -2.24
CLRN3Q8NCR9 Y_RNA.377-201ENST00000365644 108 ntBASIC1.07□□□□□ -2.24
CLRN3Q8NCR9 MIR605-201ENST00000385078 83 ntBASIC1.07□□□□□ -2.24
CLRN3Q8NCR9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.07□□□□□ -2.24
CLRN3Q8NCR9 RNU6-919P-201ENST00000516731 104 ntBASIC1.07□□□□□ -2.24
CLRN3Q8NCR9 MIR4500-201ENST00000579472 76 ntBASIC1.07□□□□□ -2.24
CLRN3Q8NCR9 AC096720.1-201ENST00000604441 183 ntBASIC1.07□□□□□ -2.24
CLRN3Q8NCR9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.07□□□□□ -2.24
CLRN3Q8NCR9 SNORD38.1-201ENST00000363863 68 ntBASIC1.06□□□□□ -2.24
CLRN3Q8NCR9 RNU6-215P-201ENST00000365169 102 ntBASIC1.06□□□□□ -2.24
CLRN3Q8NCR9 Y_RNA.697-201ENST00000516776 113 ntBASIC1.06□□□□□ -2.24
CLRN3Q8NCR9 AC008608.1-201ENST00000603910 127 ntBASIC1.06□□□□□ -2.24
CLRN3Q8NCR9 AL442128.1-201ENST00000615151 90 ntBASIC1.06□□□□□ -2.24
CLRN3Q8NCR9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CLRN3Q8NCR9 HSBP1P2-201ENST00000299671 229 ntBASIC1.05□□□□□ -2.24
CLRN3Q8NCR9 RNY3P2-201ENST00000362918 102 ntBASIC1.05□□□□□ -2.24
CLRN3Q8NCR9 RNU6-1335P-201ENST00000365426 107 ntBASIC1.05□□□□□ -2.24
CLRN3Q8NCR9 RNU6-1201P-201ENST00000384227 107 ntBASIC1.05□□□□□ -2.24
CLRN3Q8NCR9 MIR1302-5-201ENST00000408164 150 ntBASIC1.05□□□□□ -2.24
CLRN3Q8NCR9 MIR1289-2-201ENST00000408360 111 ntBASIC1.05□□□□□ -2.24
CLRN3Q8NCR9 SNORD99-201ENST00000408612 74 ntBASIC1.05□□□□□ -2.24
CLRN3Q8NCR9 AL353813.1-201ENST00000440700 253 ntBASIC1.05□□□□□ -2.24
CLRN3Q8NCR9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.05□□□□□ -2.24
CLRN3Q8NCR9 AC013244.2-201ENST00000603396 103 ntBASIC1.05□□□□□ -2.24
CLRN3Q8NCR9 RNU7-10P-201ENST00000607194 63 ntBASIC1.05□□□□□ -2.24
CLRN3Q8NCR9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.05□□□□□ -2.24
CLRN3Q8NCR9 Y_RNA.10-201ENST00000362371 110 ntBASIC1.04□□□□□ -2.24
CLRN3Q8NCR9 RNA5SP190-201ENST00000365222 118 ntBASIC1.04□□□□□ -2.24
CLRN3Q8NCR9 SNORD20-201ENST00000384550 80 ntBASIC1.04□□□□□ -2.24
CLRN3Q8NCR9 MIR573-201ENST00000384964 99 ntBASIC1.04□□□□□ -2.24
CLRN3Q8NCR9 MIR1323-201ENST00000408090 73 ntBASIC1.04□□□□□ -2.24
CLRN3Q8NCR9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.04□□□□□ -2.24
CLRN3Q8NCR9 AL353765.1-201ENST00000605514 183 ntBASIC1.04□□□□□ -2.24
CLRN3Q8NCR9 Y_RNA.163-201ENST00000363702 113 ntBASIC1.03□□□□□ -2.24
CLRN3Q8NCR9 RNU4-36P-201ENST00000364294 144 ntBASIC1.03□□□□□ -2.24
CLRN3Q8NCR9 SNORA22-201ENST00000383907 134 ntBASIC1.03□□□□□ -2.24
CLRN3Q8NCR9 Y_RNA.536-201ENST00000384621 113 ntBASIC1.03□□□□□ -2.24
CLRN3Q8NCR9 MIR577-201ENST00000385196 96 ntBASIC1.03□□□□□ -2.24
CLRN3Q8NCR9 SNORA67.6-201ENST00000391093 99 ntBASIC1.03□□□□□ -2.24
CLRN3Q8NCR9 AL354695.1-201ENST00000427935 228 ntBASIC1.03□□□□□ -2.24
CLRN3Q8NCR9 snoU13.23-201ENST00000458863 104 ntBASIC1.03□□□□□ -2.24
CLRN3Q8NCR9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.03□□□□□ -2.24
CLRN3Q8NCR9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
CLRN3Q8NCR9 SNORA31.24-201ENST00000517232 57 ntBASIC1.03□□□□□ -2.24
CLRN3Q8NCR9 AC141557.1-201ENST00000540982 400 ntBASIC1.03□□□□□ -2.24
CLRN3Q8NCR9 MTND5P40-201ENST00000559945 246 ntBASIC1.03□□□□□ -2.24
CLRN3Q8NCR9 MIR548H5-201ENST00000580314 60 ntBASIC1.03□□□□□ -2.24
CLRN3Q8NCR9 MIR8081-201ENST00000611533 95 ntBASIC1.03□□□□□ -2.24
CLRN3Q8NCR9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.02□□□□□ -2.25
CLRN3Q8NCR9 RNU6-832P-201ENST00000363319 107 ntBASIC1.02□□□□□ -2.25
CLRN3Q8NCR9 Y_RNA.174-201ENST00000363781 105 ntBASIC1.02□□□□□ -2.25
CLRN3Q8NCR9 RNU6-571P-201ENST00000384128 107 ntBASIC1.02□□□□□ -2.25
CLRN3Q8NCR9 RNY4P18-201ENST00000391107 89 ntBASIC1.02□□□□□ -2.25
CLRN3Q8NCR9 RNU6-1006P-201ENST00000516998 103 ntBASIC1.02□□□□□ -2.25
CLRN3Q8NCR9 Y_RNA.56-201ENST00000362798 112 ntBASIC1.01□□□□□ -2.25
CLRN3Q8NCR9 RNA5SP117-201ENST00000365294 118 ntBASIC1.01□□□□□ -2.25
CLRN3Q8NCR9 RNU4-45P-201ENST00000365469 141 ntBASIC1.01□□□□□ -2.25
CLRN3Q8NCR9 RNU6-1113P-201ENST00000384348 107 ntBASIC1.01□□□□□ -2.25
CLRN3Q8NCR9 RNU6-535P-201ENST00000384722 107 ntBASIC1.01□□□□□ -2.25
CLRN3Q8NCR9 SNORD100-201ENST00000408573 76 ntBASIC1.01□□□□□ -2.25
CLRN3Q8NCR9 AL591806.2-201ENST00000433122 173 ntBASIC1.01□□□□□ -2.25
CLRN3Q8NCR9 AC002350.1-201ENST00000490759 375 ntBASIC1.01□□□□□ -2.25
CLRN3Q8NCR9 AC108210.2-201ENST00000503681 201 ntBASIC1.01□□□□□ -2.25
CLRN3Q8NCR9 AC011195.1-201ENST00000578177 177 ntBASIC1.01□□□□□ -2.25
CLRN3Q8NCR9 AC104984.5-201ENST00000586878 94 ntBASIC1.01□□□□□ -2.25
CLRN3Q8NCR9 RNU6-90P-201ENST00000606352 106 ntBASIC1.01□□□□□ -2.25
CLRN3Q8NCR9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
CLRN3Q8NCR9 Y_RNA.78-201ENST00000362970 110 ntBASIC1□□□□□ -2.25
CLRN3Q8NCR9 RNU6-1099P-201ENST00000363533 107 ntBASIC1□□□□□ -2.25
CLRN3Q8NCR9 MIR608-201ENST00000384820 100 ntBASIC1□□□□□ -2.25
CLRN3Q8NCR9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1□□□□□ -2.25
CLRN3Q8NCR9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1□□□□□ -2.25
CLRN3Q8NCR9 Y_RNA.140-201ENST00000363474 103 ntBASIC0.99□□□□□ -2.25
CLRN3Q8NCR9 MIR548G-201ENST00000408442 89 ntBASIC0.99□□□□□ -2.25
CLRN3Q8NCR9 AL035461.1-201ENST00000421490 332 ntBASIC0.99□□□□□ -2.25
CLRN3Q8NCR9 AC244098.3-201ENST00000424803 96 ntBASIC0.99□□□□□ -2.25
CLRN3Q8NCR9 SPINT5P-201ENST00000448174 155 ntBASIC0.99□□□□□ -2.25
CLRN3Q8NCR9 SNRPGP12-201ENST00000449481 213 ntBASIC0.99□□□□□ -2.25
CLRN3Q8NCR9 SNORD45B-201ENST00000364617 72 ntBASIC0.98□□□□□ -2.25
CLRN3Q8NCR9 RNU6-60P-201ENST00000364792 103 ntBASIC0.98□□□□□ -2.25
CLRN3Q8NCR9 RNU6-106P-201ENST00000384405 107 ntBASIC0.98□□□□□ -2.25
CLRN3Q8NCR9 RNU6-291P-201ENST00000384720 107 ntBASIC0.98□□□□□ -2.25
CLRN3Q8NCR9 BTF3P4-201ENST00000418852 495 ntBASIC0.98□□□□□ -2.25
CLRN3Q8NCR9 BX276092.1-201ENST00000427368 251 ntBASIC0.98□□□□□ -2.25
CLRN3Q8NCR9 RNU6-135P-201ENST00000516769 101 ntBASIC0.98□□□□□ -2.25
CLRN3Q8NCR9 AC015712.3-201ENST00000559380 164 ntBASIC0.98□□□□□ -2.25
CLRN3Q8NCR9 MIR3612-201ENST00000579753 87 ntBASIC0.98□□□□□ -2.25
CLRN3Q8NCR9 MIR4298-201ENST00000584380 73 ntBASIC0.98□□□□□ -2.25
CLRN3Q8NCR9 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
CLRN3Q8NCR9 AL353997.5-201ENST00000618886 171 ntBASIC0.98□□□□□ -2.25
CLRN3Q8NCR9 RNU6-755P-201ENST00000364400 103 ntBASIC0.97□□□□□ -2.25
CLRN3Q8NCR9 MIR635-201ENST00000384830 98 ntBASIC0.97□□□□□ -2.25
CLRN3Q8NCR9 RNU6-554P-201ENST00000410466 106 ntBASIC0.97□□□□□ -2.25
CLRN3Q8NCR9 SNORD13-201ENST00000459299 104 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms