Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 RNU6-1061P-201ENST00000516530 99 ntBASIC0.92□□□□□ -2.26
PRPF38AQ8NAV1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.92□□□□□ -2.26
PRPF38AQ8NAV1 RNU6-235P-201ENST00000362644 107 ntBASIC0.91□□□□□ -2.26
PRPF38AQ8NAV1 SNORD114-2-201ENST00000363953 78 ntBASIC0.91□□□□□ -2.26
PRPF38AQ8NAV1 Y_RNA.528-201ENST00000384575 108 ntBASIC0.91□□□□□ -2.26
PRPF38AQ8NAV1 AC002350.1-201ENST00000490759 375 ntBASIC0.91□□□□□ -2.26
PRPF38AQ8NAV1 RNU7-6P-201ENST00000516845 62 ntBASIC0.91□□□□□ -2.26
PRPF38AQ8NAV1 AC013244.2-201ENST00000603396 103 ntBASIC0.91□□□□□ -2.26
PRPF38AQ8NAV1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.91□□□□□ -2.26
PRPF38AQ8NAV1 RNA5SP133-201ENST00000363368 119 ntBASIC0.9□□□□□ -2.27
PRPF38AQ8NAV1 MIR598-201ENST00000384868 97 ntBASIC0.9□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-704P-201ENST00000364162 103 ntBASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 RNY1P2-201ENST00000364820 117 ntBASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.346-201ENST00000365385 112 ntBASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.540-201ENST00000384638 111 ntBASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 AL606490.4-201ENST00000423117 127 ntBASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 AL359881.1-201ENST00000602916 267 ntBASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 AC025166.1-201ENST00000612411 163 ntBASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 U6.109-201ENST00000636749 87 ntBASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.98-201ENST00000363109 102 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-774P-201ENST00000363238 107 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.174-201ENST00000363781 105 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 SNORD58C-201ENST00000365223 64 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.466-201ENST00000384294 113 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 MIR1270-201ENST00000459320 83 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 RNU7-2P-201ENST00000516096 62 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-781P-201ENST00000516377 101 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 MIR4714-201ENST00000580728 77 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 MIR6835-201ENST00000621552 64 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 MIR6866-201ENST00000638146 69 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 MIR18A-201ENST00000362310 71 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 SNORD115-19-201ENST00000363098 82 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 SNORD115-18-201ENST00000363293 82 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 SNORD115-17-201ENST00000364612 82 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 RNY1P8-201ENST00000383970 114 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 SNORA36.2-201ENST00000384004 127 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-80P-201ENST00000384195 107 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 MIR206-201ENST00000384872 86 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-469P-201ENST00000516253 101 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 SNORA25.16-201ENST00000516741 121 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.697-201ENST00000516776 113 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 RNY4P6-201ENST00000363667 96 ntBASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 MIRLET7F2-201ENST00000385277 83 ntBASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 RNU7-48P-201ENST00000458875 63 ntBASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-135P-201ENST00000516769 101 ntBASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-971P-201ENST00000516920 106 ntBASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 AC138749.4-201ENST00000563970 127 ntBASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 AC138907.6-201ENST00000568401 126 ntBASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 AC105081.1-201ENST00000617727 106 ntBASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 MIR101-2-201ENST00000362195 79 ntBASIC0.85□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-865P-201ENST00000364772 107 ntBASIC0.85□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.448-201ENST00000384185 108 ntBASIC0.85□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-616P-201ENST00000384353 107 ntBASIC0.85□□□□□ -2.27
PRPF38AQ8NAV1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.85□□□□□ -2.27
PRPF38AQ8NAV1 AC087741.2-201ENST00000619415 172 ntBASIC0.85□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.119-201ENST00000363301 96 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 SNORD115-35-201ENST00000365122 82 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-429P-201ENST00000384582 108 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.536-201ENST00000384621 113 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 MIR140-201ENST00000385282 100 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-1321P-201ENST00000390905 107 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-772P-201ENST00000516042 105 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-531P-201ENST00000516694 104 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 AL590095.2-201ENST00000604136 117 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 AL157777.2-201ENST00000258070 137 ntBASIC0.83□□□□□ -2.28
PRPF38AQ8NAV1 MIR7-2-201ENST00000384970 110 ntBASIC0.83□□□□□ -2.28
PRPF38AQ8NAV1 RNA5SP480-201ENST00000516840 109 ntBASIC0.83□□□□□ -2.28
PRPF38AQ8NAV1 AP001362.1-201ENST00000625165 124 ntBASIC0.83□□□□□ -2.28
PRPF38AQ8NAV1 MTND5P18-201ENST00000445624 1801 ntBASIC0.82□□□□□ -2.28
PRPF38AQ8NAV1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
PRPF38AQ8NAV1 RNU6-535P-201ENST00000384722 107 ntBASIC0.82□□□□□ -2.28
PRPF38AQ8NAV1 MIR508-201ENST00000384857 115 ntBASIC0.82□□□□□ -2.28
PRPF38AQ8NAV1 MIR548D2-201ENST00000384955 97 ntBASIC0.82□□□□□ -2.28
PRPF38AQ8NAV1 RNU7-10P-201ENST00000607194 63 ntBASIC0.82□□□□□ -2.28
PRPF38AQ8NAV1 uc_338.16-201ENST00000621804 95 ntBASIC0.82□□□□□ -2.28
PRPF38AQ8NAV1 Y_RNA.328-201ENST00000365208 113 ntBASIC0.81□□□□□ -2.28
PRPF38AQ8NAV1 TMSB4XP3-201ENST00000445144 114 ntBASIC0.81□□□□□ -2.28
PRPF38AQ8NAV1 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.81□□□□□ -2.28
PRPF38AQ8NAV1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.81□□□□□ -2.28
PRPF38AQ8NAV1 RNU6-187P-201ENST00000384139 106 ntBASIC0.8□□□□□ -2.28
PRPF38AQ8NAV1 MT-TI-201ENST00000387365 69 ntBASIC0.8□□□□□ -2.28
PRPF38AQ8NAV1 AC018659.1-201ENST00000551083 169 ntBASIC0.8□□□□□ -2.28
PRPF38AQ8NAV1 Y_RNA.56-201ENST00000362798 112 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 RNU6-945P-201ENST00000383947 107 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 RNY1P4-201ENST00000384595 115 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 RNU6-291P-201ENST00000384720 107 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 RNU6-1234P-201ENST00000516877 103 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 Y_RNA.712-201ENST00000517011 92 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 MIR3678-201ENST00000578455 94 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 MIR548H5-201ENST00000580314 60 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 MIR6513-201ENST00000621188 64 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 RNA5SP121-201ENST00000516537 101 ntBASIC0.78□□□□□ -2.28
PRPF38AQ8NAV1 MTND5P34-201ENST00000568888 325 ntBASIC0.78□□□□□ -2.28
PRPF38AQ8NAV1 U6.95-201ENST00000636931 70 ntBASIC0.78□□□□□ -2.28
PRPF38AQ8NAV1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms