Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 RNU6-1061P-201ENST00000516530 99 ntBASIC0.92□□□□□ -2.26
PRPF38AQ8NAV1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.92□□□□□ -2.26
PRPF38AQ8NAV1 RNU6-235P-201ENST00000362644 107 ntBASIC0.91□□□□□ -2.26
PRPF38AQ8NAV1 SNORD114-2-201ENST00000363953 78 ntBASIC0.91□□□□□ -2.26
PRPF38AQ8NAV1 Y_RNA.528-201ENST00000384575 108 ntBASIC0.91□□□□□ -2.26
PRPF38AQ8NAV1 AC002350.1-201ENST00000490759 375 ntBASIC0.91□□□□□ -2.26
PRPF38AQ8NAV1 RNU7-6P-201ENST00000516845 62 ntBASIC0.91□□□□□ -2.26
PRPF38AQ8NAV1 AC013244.2-201ENST00000603396 103 ntBASIC0.91□□□□□ -2.26
PRPF38AQ8NAV1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.91□□□□□ -2.26
PRPF38AQ8NAV1 RNA5SP133-201ENST00000363368 119 ntBASIC0.9□□□□□ -2.27
PRPF38AQ8NAV1 MIR598-201ENST00000384868 97 ntBASIC0.9□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-704P-201ENST00000364162 103 ntBASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 RNY1P2-201ENST00000364820 117 ntBASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.346-201ENST00000365385 112 ntBASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.540-201ENST00000384638 111 ntBASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 AL606490.4-201ENST00000423117 127 ntBASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 AL359881.1-201ENST00000602916 267 ntBASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 AC025166.1-201ENST00000612411 163 ntBASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 U6.109-201ENST00000636749 87 ntBASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.98-201ENST00000363109 102 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-774P-201ENST00000363238 107 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.174-201ENST00000363781 105 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 SNORD58C-201ENST00000365223 64 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.466-201ENST00000384294 113 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 MIR1270-201ENST00000459320 83 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 RNU7-2P-201ENST00000516096 62 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-781P-201ENST00000516377 101 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 MIR4714-201ENST00000580728 77 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 MIR6835-201ENST00000621552 64 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 MIR6866-201ENST00000638146 69 ntBASIC0.88□□□□□ -2.27
PRPF38AQ8NAV1 MIR18A-201ENST00000362310 71 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 SNORD115-19-201ENST00000363098 82 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 SNORD115-18-201ENST00000363293 82 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 SNORD115-17-201ENST00000364612 82 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 RNY1P8-201ENST00000383970 114 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 SNORA36.2-201ENST00000384004 127 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-80P-201ENST00000384195 107 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 MIR206-201ENST00000384872 86 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-469P-201ENST00000516253 101 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 SNORA25.16-201ENST00000516741 121 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.697-201ENST00000516776 113 ntBASIC0.87□□□□□ -2.27
PRPF38AQ8NAV1 RNY4P6-201ENST00000363667 96 ntBASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 MIRLET7F2-201ENST00000385277 83 ntBASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 RNU7-48P-201ENST00000458875 63 ntBASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-135P-201ENST00000516769 101 ntBASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-971P-201ENST00000516920 106 ntBASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 AC138749.4-201ENST00000563970 127 ntBASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 AC138907.6-201ENST00000568401 126 ntBASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 AC105081.1-201ENST00000617727 106 ntBASIC0.86□□□□□ -2.27
PRPF38AQ8NAV1 MIR101-2-201ENST00000362195 79 ntBASIC0.85□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-865P-201ENST00000364772 107 ntBASIC0.85□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.448-201ENST00000384185 108 ntBASIC0.85□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-616P-201ENST00000384353 107 ntBASIC0.85□□□□□ -2.27
PRPF38AQ8NAV1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.85□□□□□ -2.27
PRPF38AQ8NAV1 AC087741.2-201ENST00000619415 172 ntBASIC0.85□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.119-201ENST00000363301 96 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 SNORD115-35-201ENST00000365122 82 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-429P-201ENST00000384582 108 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 Y_RNA.536-201ENST00000384621 113 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 MIR140-201ENST00000385282 100 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-1321P-201ENST00000390905 107 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-772P-201ENST00000516042 105 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 RNU6-531P-201ENST00000516694 104 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 AL590095.2-201ENST00000604136 117 ntBASIC0.84□□□□□ -2.27
PRPF38AQ8NAV1 AL157777.2-201ENST00000258070 137 ntBASIC0.83□□□□□ -2.28
PRPF38AQ8NAV1 MIR7-2-201ENST00000384970 110 ntBASIC0.83□□□□□ -2.28
PRPF38AQ8NAV1 RNA5SP480-201ENST00000516840 109 ntBASIC0.83□□□□□ -2.28
PRPF38AQ8NAV1 AP001362.1-201ENST00000625165 124 ntBASIC0.83□□□□□ -2.28
PRPF38AQ8NAV1 MTND5P18-201ENST00000445624 1801 ntBASIC0.82□□□□□ -2.28
PRPF38AQ8NAV1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
PRPF38AQ8NAV1 RNU6-535P-201ENST00000384722 107 ntBASIC0.82□□□□□ -2.28
PRPF38AQ8NAV1 MIR508-201ENST00000384857 115 ntBASIC0.82□□□□□ -2.28
PRPF38AQ8NAV1 MIR548D2-201ENST00000384955 97 ntBASIC0.82□□□□□ -2.28
PRPF38AQ8NAV1 RNU7-10P-201ENST00000607194 63 ntBASIC0.82□□□□□ -2.28
PRPF38AQ8NAV1 uc_338.16-201ENST00000621804 95 ntBASIC0.82□□□□□ -2.28
PRPF38AQ8NAV1 Y_RNA.328-201ENST00000365208 113 ntBASIC0.81□□□□□ -2.28
PRPF38AQ8NAV1 TMSB4XP3-201ENST00000445144 114 ntBASIC0.81□□□□□ -2.28
PRPF38AQ8NAV1 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.81□□□□□ -2.28
PRPF38AQ8NAV1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.81□□□□□ -2.28
PRPF38AQ8NAV1 RNU6-187P-201ENST00000384139 106 ntBASIC0.8□□□□□ -2.28
PRPF38AQ8NAV1 MT-TI-201ENST00000387365 69 ntBASIC0.8□□□□□ -2.28
PRPF38AQ8NAV1 AC018659.1-201ENST00000551083 169 ntBASIC0.8□□□□□ -2.28
PRPF38AQ8NAV1 Y_RNA.56-201ENST00000362798 112 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 RNU6-945P-201ENST00000383947 107 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 RNY1P4-201ENST00000384595 115 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 RNU6-291P-201ENST00000384720 107 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 RNU6-1234P-201ENST00000516877 103 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 Y_RNA.712-201ENST00000517011 92 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 MIR3678-201ENST00000578455 94 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 MIR548H5-201ENST00000580314 60 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 MIR6513-201ENST00000621188 64 ntBASIC0.79□□□□□ -2.28
PRPF38AQ8NAV1 RNA5SP121-201ENST00000516537 101 ntBASIC0.78□□□□□ -2.28
PRPF38AQ8NAV1 MTND5P34-201ENST00000568888 325 ntBASIC0.78□□□□□ -2.28
PRPF38AQ8NAV1 U6.95-201ENST00000636931 70 ntBASIC0.78□□□□□ -2.28
PRPF38AQ8NAV1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms