Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNU7-137P-201ENST00000516788 62 ntBASIC0.26□□□□□ -2.37
CCDC71LQ8N9Z2 AL359881.1-201ENST00000602916 267 ntBASIC0.26□□□□□ -2.37
CCDC71LQ8N9Z2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.26□□□□□ -2.37
CCDC71LQ8N9Z2 RNU4-58P-201ENST00000363192 141 ntBASIC0.25□□□□□ -2.37
CCDC71LQ8N9Z2 SNORA36.1-201ENST00000363424 132 ntBASIC0.25□□□□□ -2.37
CCDC71LQ8N9Z2 Y_RNA.785-201ENST00000384290 109 ntBASIC0.25□□□□□ -2.37
CCDC71LQ8N9Z2 RNU6-1135P-201ENST00000411083 103 ntBASIC0.25□□□□□ -2.37
CCDC71LQ8N9Z2 MIR1270-201ENST00000459320 83 ntBASIC0.25□□□□□ -2.37
CCDC71LQ8N9Z2 Y_RNA.700-201ENST00000516806 100 ntBASIC0.25□□□□□ -2.37
CCDC71LQ8N9Z2 AC022523.2-201ENST00000561045 150 ntBASIC0.25□□□□□ -2.37
CCDC71LQ8N9Z2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.25□□□□□ -2.37
CCDC71LQ8N9Z2 MIR101-2-201ENST00000362195 79 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 SNORD44.1-201ENST00000363202 61 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 SNORD118-201ENST00000363593 134 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 RNU6-1229P-201ENST00000364295 107 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 Y_RNA.298-201ENST00000364960 107 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 RNU6-1130P-201ENST00000365434 107 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 AL603914.1-201ENST00000401964 204 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 RNU4-69P-201ENST00000410677 143 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 SUMO1P3-201ENST00000439961 304 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 RNA5SP268-201ENST00000516828 124 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 AC138749.4-201ENST00000563970 127 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 MIR330-201ENST00000362196 94 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 Y_RNA.119-201ENST00000363301 96 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 SNORD114-10-201ENST00000363409 72 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 Y_RNA.205-201ENST00000364128 113 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 RNA5SP245-201ENST00000364239 121 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 RNU7-197P-201ENST00000458836 62 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 AC108081.1-201ENST00000604358 221 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 AL137067.1-201ENST00000615933 120 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 Y_RNA.8-201ENST00000362353 102 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 SNORA63.5-201ENST00000363548 123 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 RNA5SP457-201ENST00000363657 124 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 Y_RNA.299-201ENST00000364973 94 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 RNU6-449P-201ENST00000383914 107 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 SNORD116-18-201ENST00000383961 92 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 RNU6-460P-201ENST00000391158 108 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 PCNPP3-201ENST00000393579 471 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 SNRPGP12-201ENST00000449481 213 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 RNA5SP227-201ENST00000516184 113 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 SNORA62.5-201ENST00000516634 120 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 RNY4P20-201ENST00000516678 93 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 Y_RNA.778-201ENST00000620203 90 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 AC090625.1-201ENST00000357130 210 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-915P-201ENST00000364943 103 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-804P-201ENST00000384286 107 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 MIRLET7F2-201ENST00000385277 83 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 MIR513C-201ENST00000401352 84 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-394P-201ENST00000410735 107 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-135P-201ENST00000516769 101 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-182P-201ENST00000516970 105 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 MIR8087-201ENST00000612745 78 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 RNA5SP62-201ENST00000363457 110 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 SNORD28-201ENST00000384706 75 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-1104P-201ENST00000384723 104 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-1321P-201ENST00000390905 107 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.580-201ENST00000391004 95 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 SNORD77B-201ENST00000391112 67 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 SCARNA16.5-201ENST00000517114 183 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 RNA5SP47-201ENST00000517230 109 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 IGKV1-22-201ENST00000524313 326 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 AC098479.1-201ENST00000609225 154 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 AC090425.1-201ENST00000610007 140 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 MIR7107-201ENST00000611489 80 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 FTX_2.1-201ENST00000618816 94 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 AC244669.1-204ENST00000621564 178 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.49-201ENST00000362714 112 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.85-201ENST00000363014 111 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.150-201ENST00000363562 102 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 RNY1P2-201ENST00000364820 117 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-1327P-201ENST00000365302 105 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.398-201ENST00000383952 99 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.448-201ENST00000384185 108 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 MIR206-201ENST00000384872 86 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-1307P-201ENST00000391012 103 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 AC069271.1-201ENST00000445577 156 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 AC108740.1-201ENST00000498629 225 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 MIR4639-201ENST00000584938 69 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.270-201ENST00000364693 104 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-886P-201ENST00000384319 105 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 MT-TI-201ENST00000387365 69 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 RNU2-59P-201ENST00000410482 191 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 AC073261.1-201ENST00000429409 121 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 RNU7-48P-201ENST00000458875 63 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.692-201ENST00000516627 105 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 MTND5P41-201ENST00000517498 206 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 MIR3144-201ENST00000579460 79 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 MIR4500-201ENST00000579472 76 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 MIR3121-201ENST00000579680 77 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 AC023932.2-201ENST00000603176 175 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 MIR6828-201ENST00000636181 60 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 AC091304.10-201ENST00000641554 121 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.56-201ENST00000362798 112 ntBASIC0.17□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.294-201ENST00000364916 102 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 270.1 ms