Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 SNORD4B-201ENST00000459083 72 ntBASIC2.23□□□□□ -2.05
PHTF2Q8N3S3 Y_RNA.648-201ENST00000459455 110 ntBASIC2.23□□□□□ -2.05
PHTF2Q8N3S3 RNU6-403P-201ENST00000363163 104 ntBASIC2.22□□□□□ -2.05
PHTF2Q8N3S3 RNU6-654P-201ENST00000364373 107 ntBASIC2.22□□□□□ -2.05
PHTF2Q8N3S3 MIR4662A-201ENST00000637499 67 ntBASIC2.22□□□□□ -2.05
PHTF2Q8N3S3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.22□□□□□ -2.05
PHTF2Q8N3S3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PHTF2Q8N3S3 MIR101-2-201ENST00000362195 79 ntBASIC2.21□□□□□ -2.06
PHTF2Q8N3S3 RNU4-32P-201ENST00000363404 141 ntBASIC2.21□□□□□ -2.06
PHTF2Q8N3S3 Y_RNA.316-201ENST00000365118 111 ntBASIC2.21□□□□□ -2.06
PHTF2Q8N3S3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
PHTF2Q8N3S3 HMGN2P19-201ENST00000425149 265 ntBASIC2.21□□□□□ -2.06
PHTF2Q8N3S3 AL591806.2-201ENST00000433122 173 ntBASIC2.21□□□□□ -2.06
PHTF2Q8N3S3 RNU6-531P-201ENST00000516694 104 ntBASIC2.21□□□□□ -2.06
PHTF2Q8N3S3 AC019288.1-201ENST00000557918 224 ntBASIC2.21□□□□□ -2.06
PHTF2Q8N3S3 RNU7-10P-201ENST00000607194 63 ntBASIC2.21□□□□□ -2.06
PHTF2Q8N3S3 AP000553.5-201ENST00000641933 54 ntBASIC2.21□□□□□ -2.06
PHTF2Q8N3S3 RNU1-36P-201ENST00000365130 165 ntBASIC2.2□□□□□ -2.06
PHTF2Q8N3S3 RNA5SP95-201ENST00000410319 137 ntBASIC2.2□□□□□ -2.06
PHTF2Q8N3S3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PHTF2Q8N3S3 AC087499.7-201ENST00000441958 109 ntBASIC2.2□□□□□ -2.06
PHTF2Q8N3S3 RNU6-65P-201ENST00000516332 98 ntBASIC2.2□□□□□ -2.06
PHTF2Q8N3S3 MIR4536-1-201ENST00000583537 88 ntBASIC2.2□□□□□ -2.06
PHTF2Q8N3S3 ZNF355P-201ENST00000427301 3216 ntBASIC2.19□□□□□ -2.06
PHTF2Q8N3S3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
PHTF2Q8N3S3 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
PHTF2Q8N3S3 RPL23AP42-201ENST00000471152 471 ntBASIC2.19□□□□□ -2.06
PHTF2Q8N3S3 RNU6-1194P-201ENST00000516208 104 ntBASIC2.19□□□□□ -2.06
PHTF2Q8N3S3 AC015712.3-201ENST00000559380 164 ntBASIC2.19□□□□□ -2.06
PHTF2Q8N3S3 MIR6132-201ENST00000622083 109 ntBASIC2.19□□□□□ -2.06
PHTF2Q8N3S3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PHTF2Q8N3S3 AC023934.1-201ENST00000574529 2389 ntBASIC2.18□□□□□ -2.06
PHTF2Q8N3S3 SNORD113.3-201ENST00000364630 78 ntBASIC2.18□□□□□ -2.06
PHTF2Q8N3S3 Y_RNA.330-201ENST00000365230 109 ntBASIC2.18□□□□□ -2.06
PHTF2Q8N3S3 MIR635-201ENST00000384830 98 ntBASIC2.18□□□□□ -2.06
PHTF2Q8N3S3 SNORA48.3-201ENST00000391081 134 ntBASIC2.18□□□□□ -2.06
PHTF2Q8N3S3 MIR1257-201ENST00000408490 117 ntBASIC2.18□□□□□ -2.06
PHTF2Q8N3S3 SNORA25.16-201ENST00000516741 121 ntBASIC2.18□□□□□ -2.06
PHTF2Q8N3S3 AL512310.8-201ENST00000550183 120 ntBASIC2.18□□□□□ -2.06
PHTF2Q8N3S3 uc_338.6-201ENST00000613544 171 ntBASIC2.18□□□□□ -2.06
PHTF2Q8N3S3 MIR516A2-201ENST00000384888 90 ntBASIC2.17□□□□□ -2.06
PHTF2Q8N3S3 MIR516A1-201ENST00000385033 90 ntBASIC2.17□□□□□ -2.06
PHTF2Q8N3S3 RNU1-78P-201ENST00000391248 165 ntBASIC2.17□□□□□ -2.06
PHTF2Q8N3S3 RNA5SP338-201ENST00000410495 85 ntBASIC2.17□□□□□ -2.06
PHTF2Q8N3S3 RNU6-1054P-201ENST00000411293 104 ntBASIC2.17□□□□□ -2.06
PHTF2Q8N3S3 MIR4422-201ENST00000581938 83 ntBASIC2.17□□□□□ -2.06
PHTF2Q8N3S3 RNU7-185P-201ENST00000459215 60 ntBASIC2.16□□□□□ -2.06
PHTF2Q8N3S3 RN7SKP88-201ENST00000516847 250 ntBASIC2.16□□□□□ -2.06
PHTF2Q8N3S3 AC140658.3-201ENST00000567603 271 ntBASIC2.16□□□□□ -2.06
PHTF2Q8N3S3 MIR548H5-201ENST00000580314 60 ntBASIC2.16□□□□□ -2.06
PHTF2Q8N3S3 MIR5002-201ENST00000584713 97 ntBASIC2.16□□□□□ -2.06
PHTF2Q8N3S3 7SK.8-201ENST00000612110 250 ntBASIC2.16□□□□□ -2.06
PHTF2Q8N3S3 7SK.11-201ENST00000615477 250 ntBASIC2.16□□□□□ -2.06
PHTF2Q8N3S3 7SK.13-201ENST00000622040 250 ntBASIC2.16□□□□□ -2.06
PHTF2Q8N3S3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
PHTF2Q8N3S3 SNORD36A-201ENST00000362874 73 ntBASIC2.15□□□□□ -2.07
PHTF2Q8N3S3 RNU6-934P-201ENST00000365154 107 ntBASIC2.15□□□□□ -2.07
PHTF2Q8N3S3 Y_RNA.508-201ENST00000384502 114 ntBASIC2.15□□□□□ -2.07
PHTF2Q8N3S3 U8.13-201ENST00000390842 128 ntBASIC2.15□□□□□ -2.07
PHTF2Q8N3S3 RNU6-466P-201ENST00000391224 103 ntBASIC2.15□□□□□ -2.07
PHTF2Q8N3S3 Y_RNA.588-201ENST00000391254 102 ntBASIC2.15□□□□□ -2.07
PHTF2Q8N3S3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.15□□□□□ -2.07
PHTF2Q8N3S3 RNA5SP489-201ENST00000410986 109 ntBASIC2.15□□□□□ -2.07
PHTF2Q8N3S3 RNU6-717P-201ENST00000459076 104 ntBASIC2.15□□□□□ -2.07
PHTF2Q8N3S3 AC090255.1-201ENST00000495779 349 ntBASIC2.15□□□□□ -2.07
PHTF2Q8N3S3 SNORA25.13-201ENST00000516395 103 ntBASIC2.15□□□□□ -2.07
PHTF2Q8N3S3 MIR514B-201ENST00000516774 80 ntBASIC2.15□□□□□ -2.07
PHTF2Q8N3S3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.15□□□□□ -2.07
PHTF2Q8N3S3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
PHTF2Q8N3S3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
PHTF2Q8N3S3 RNU6-1296P-201ENST00000383879 107 ntBASIC2.14□□□□□ -2.07
PHTF2Q8N3S3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.14□□□□□ -2.07
PHTF2Q8N3S3 snoU13.11-201ENST00000459219 104 ntBASIC2.14□□□□□ -2.07
PHTF2Q8N3S3 AC108210.2-201ENST00000503681 201 ntBASIC2.14□□□□□ -2.07
PHTF2Q8N3S3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PHTF2Q8N3S3 RNU6-380P-201ENST00000410207 107 ntBASIC2.13□□□□□ -2.07
PHTF2Q8N3S3 RNU7-85P-201ENST00000458851 63 ntBASIC2.13□□□□□ -2.07
PHTF2Q8N3S3 AC008834.1-201ENST00000511612 175 ntBASIC2.13□□□□□ -2.07
PHTF2Q8N3S3 RNU7-153P-201ENST00000516455 62 ntBASIC2.13□□□□□ -2.07
PHTF2Q8N3S3 RNU6-165P-201ENST00000517170 99 ntBASIC2.13□□□□□ -2.07
PHTF2Q8N3S3 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.13□□□□□ -2.07
PHTF2Q8N3S3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PHTF2Q8N3S3 Y_RNA.221-201ENST00000364248 96 ntBASIC2.12□□□□□ -2.07
PHTF2Q8N3S3 RNA5SP160-201ENST00000364866 120 ntBASIC2.12□□□□□ -2.07
PHTF2Q8N3S3 RNU6-811P-201ENST00000384069 107 ntBASIC2.12□□□□□ -2.07
PHTF2Q8N3S3 MIR676-201ENST00000390702 67 ntBASIC2.12□□□□□ -2.07
PHTF2Q8N3S3 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.12□□□□□ -2.07
PHTF2Q8N3S3 SNORD111-201ENST00000408139 94 ntBASIC2.12□□□□□ -2.07
PHTF2Q8N3S3 SNORD63B-201ENST00000411005 70 ntBASIC2.12□□□□□ -2.07
PHTF2Q8N3S3 AL356379.1-201ENST00000414105 126 ntBASIC2.12□□□□□ -2.07
PHTF2Q8N3S3 RNA5SP37-201ENST00000365420 130 ntBASIC2.11□□□□□ -2.07
PHTF2Q8N3S3 MIR548U-201ENST00000390728 81 ntBASIC2.11□□□□□ -2.07
PHTF2Q8N3S3 RNU6-129P-201ENST00000391022 107 ntBASIC2.11□□□□□ -2.07
PHTF2Q8N3S3 SNORD100-201ENST00000408573 76 ntBASIC2.11□□□□□ -2.07
PHTF2Q8N3S3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.11□□□□□ -2.07
PHTF2Q8N3S3 AC048334.1-201ENST00000477975 159 ntBASIC2.11□□□□□ -2.07
PHTF2Q8N3S3 MIR4448-201ENST00000584360 86 ntBASIC2.11□□□□□ -2.07
PHTF2Q8N3S3 AC013244.2-201ENST00000603396 103 ntBASIC2.11□□□□□ -2.07
PHTF2Q8N3S3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PHTF2Q8N3S3 Y_RNA.56-201ENST00000362798 112 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms